Team:Calgary/Project/References
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References
- Canadian Centre for Occupational Health and Safety: Health Effects of Sulfur Dioxide, http://www.ccohs.ca/oshanswers/chemicals/chem_profiles/sulfurdi/health_sul.html (Retrieved: 09/18/2012)
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- Herman DC, Fedorak PM, MacKinnon MD, Costerton JW. Biodegradation of naphthenic acids by microbial populations indigenous to oil sands tailings. Can J Microbiol 1994 Jun;40(6):467-477.
- Holowenko FM, Mackinnon MD, Fedorak PM. Naphthenic acids and surrogate naphthenic acids in methanogenic microcosms. Water Res 2001 Aug;35(11):2595-2606.
- Kamali N, Tavallaie M, Bambai B, Karkhane AA, Miri M. Site-directed mutagenesis enhances the activity of NADH-FMN oxidoreductase (DszD) activity of Rhodococcus erythropolis. Biotechnol Lett. 2010; 32: 921-927
- Lewenza S, Falsafi RK, Winsor G, Gooderham WJ, McPhee JB, Brinkman FS, et al. Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: a tool for identifying differentially regulated genes. Genome Res 2005 Apr;15(4):583-589.
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- Oshiro T, Ohkita R, Takikawa T, Manabe M, Lee WC, Tanokura M, Izumi Y. Improvement of 2'-hydroxybiphenyl-2-sulfinate desulfinase, an enzyme involved in the dibenzothiophene desulfurization pathway, from Rhodococcus erythropolis KA2-5-1 by site-directed mutagenesis. Biosci Biotechnol Biochem. 2007 Nov.; 71(11):2815-21
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- Sheridan DL, Hughes TE. A faster way to make GFP-based biosensors: two new transposons for creating multicolored libraries of fluorescent fusion proteins. BMC Biotechnol 2004 Aug 18;4:17.
- Shu L, Chiou Y, Orville AM, Miller MA, Lipscomb JD, Que L. X-ray absorption spectroscopic studies of the Fe(II) active site of catechol 2,3-dioxygenase. Implications for the extradiol cleavage mechanism. Biochem 1995; 34:6649-6659.
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- Timms-Wilson TM, Bailey MJ. Reliable use of green fluorescent protein in fluorescent pseudomonads. J Microbiol Methods 2001 Jul 30;46(1):77-80.
- United Nations Environment Programme: Sulfur Air Pollution, http://www.unep.org/transport/pcfv/pdf/Ethiopia-AirPollutionsulphur.pdf (Retrieved: 09/18/2012)
- United States Environmental Protection Agency: Sulfur Dioxide, http://www.epa.gov/air/sulfurdioxide/ (Retrieved: 09/18/2012)
- Vogel U, Jensen KF. The RNA chain elongation rate in Escherichia coli depends on the growth rate. J Bacteriol. 1994 May;176(10):2807-13.
- Wright JK, Overath P. Purification of the lactose:H+ carrier of Escherichia coli and characterization of galactoside binding and transport. Eur J Biochem.1984 Feb 1;138(3):497-508.
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- 2009 iGEM Calgary, 2009.igem.org/Team:Calgary/Notebook
- He, A., Li, T., Daniels, L., Fotheringham, I., and Rosazza, J.P.N. 2004. Nocardia sp. Carboxylic Acid Reductase: Cloning, Expression, and Characterization of a New Aldehyde Oxidoreductase Family. Applied and Environmental Microbiology 70:1874–1881.
- Venkitasubramanian, P., Daniels, L., and Rosazza, J.P.N. 2006. Reduction of Carboxylic Acids by Nocardia Aldehyde Oxidoreductase Requires a Phosphopantetheinylated Enzyme. Journal of Biological Chemistry 282:478-485.
- Rude, M.A., Baron, T.S., Brubaker, S., Alibhai, M., Del Cardayre, S.B., and Schirmer, A. 2011. Terminal olefin (1-alkene) biosynthesis by a novel p450 fatty acid decarboxylase from Jeotgalicoccus species. Applied and Environmental Microbiology 77:1718–1727.
- German Collection of Microorganisms and Cell Cultures (DSMZ): Nocardia iowensis. https://www.dsmz.de/catalogues/details/culture/DSM-45197.html (retrieved 8/28/2012)
- UW iGEM: Diesel Production Background. https://2011.igem.org/Team:Washington/Alkanes/Background (retrieved 8/28/2012)
- Parts Registry: The PetroBrick – Strong Constitutive Expression of ADC and AAR in pSB1C3. http://partsregistry.org/wiki/index.php?title=Part:BBa_K590025 (retrieved 8/28/2012)