Team:NTNU Trondheim/links
From 2012.igem.org
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[http://tools.neb.com/NEBcutter2/ NEBCutter 2]
[http://tools.neb.com/NEBcutter2/ NEBCutter 2]
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+ [http://watcut.uwaterloo.ca/watcut/watcut/template.php WatCut: An on-line tool for restriction analysis, silent mutation scanning, and SNP-RFLP analysis]
=Just for fun=
=Just for fun=
Latest revision as of 09:16, 31 July 2012
Links
This page contains links related to both our project, iGEM and molecular biology in general:
BioBrick parts and genes of interest
Escherichia coli lct operon ([1] ,[2] , [3] ) (source of lactate inducible promoter system)
<partinfo>Bba_K112808</partinfo> - Enterobacteria phage T4 Lysis Device - no promoter.
iGEM/BioBricks resources and information
Lecture videos
Standard Assembly
Restriction enzymes and the BioBrick system
BioBrick prefix and suffix
Assembly strategies
3A Assembly
Protein coding
Ribosome Binding Site
Design of Ribosome Binding Sites
Distribution kits - about
Parts registry help page
Antibiotic resistance of plasmid backbones
DNA Assembly
DNA
Plasmid backbones nomenclature
Spring 2012 DNA distribution kit contents
BioBrick Assembly kit sold by New England BioLabs.
BioBricks Assembly kit manual .
Open WetWare: parts fabrication
Genomics and bioinformatics resources
http://www.ecogene.org/ - Updated information about the E. coli K-12 genome and proteome sequences
E. coli links
E coli DH1, complete genome
Escherichia coli str. K-12 substr. MG1655, complete genome
Glimmer (gene finder) and RBSfinder
Promoter construction
E. coli genotypes ]
Bionumers - The database of biological numbers
Using the Registry
Quality Control
How to check a part
Sequence analysis instructions
Reading gel images
Molecular biology
AHL . Parts registry page on [N-]acyl-homoserine lactones, molecules used in cell signalling.
Lux Parts registry page on the Lux genetic regulatory system.
Similar and relevant projects
Brigham Young University iGEM 2012: http://openwetware.org/wiki/BYU_iGEM_2012 (Cancer detection, Lactacte sensor)
"Engineering microbes to sense and eradicate Pseudomonas Aeruginosa, a human pathogen" Mol Syst Biol. 2011 Aug 16;7:521
http://www.ncbi.nlm.nih.gov/pubmed/16330045
https://2008.igem.org/Team:NTU-Singapore
Software
Cain: Stochastic Simulations for Chemical Kinetics
J5 Automated DNA Assembly Software
NEBCutter 2
WatCut: An on-line tool for restriction analysis, silent mutation scanning, and SNP-RFLP analysis
Just for fun
"The PCR song": http://www.youtube.com/watch?v=x5yPkxCLads
"Protein synthesis: an epic on the cellular level": http://www.youtube.com/watch?v=u9dhO0iCLww