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Team:Groningen/Notebook/Modeling 19June2012
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Added thermodynamic constraints to 763 out of 1,681 reactions in iBsu1103. Data was available for 751 out of 1,138 metabolites based on their KEGG ID. Data was sourced from http://equilibrator.weizmann.ac.il/. | Added thermodynamic constraints to 763 out of 1,681 reactions in iBsu1103. Data was available for 751 out of 1,138 metabolites based on their KEGG ID. Data was sourced from http://equilibrator.weizmann.ac.il/. | ||
Revision as of 22:51, 19 June 2012
Added thermodynamic constraints to 763 out of 1,681 reactions in iBsu1103. Data was available for 751 out of 1,138 metabolites based on their KEGG ID. Data was sourced from http://equilibrator.weizmann.ac.il/.
Cell growth is possible with only D-glucose, water, glutamine, and potassium.
Preparing to modify GAMS code to allow for dynamic FBA to observe the external concentrations over time.
