Team:Bielefeld-Germany/Labjournal/week21

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(Difference between revisions)
(Wednesday September 19th)
(Tuesday September 18th)
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===Monday September 17th===
===Monday September 17th===
===Tuesday September 18th===
===Tuesday September 18th===
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* '''Team Cellulose Binding Domain:'''
 +
**Primer arrived:
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**Gradient-PCR with the CBDcex(T7)+GFP_His-plasmid and S3N10-CBDcex_RV and S3N10-GFP_FW primer-mix. the right product appeared only at 66,5°C; Lower: wrong product; Higher: no product
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**Following PCR at 66,5°C(50µL) Result: main product at 2 kbp
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**Alternativly took the 20 µL-tube with right product and added 0,5 µL ''Dpn''I for over-night digestion.
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**Gradient-PCR with CDBcex(T7)+GFP_His-Template and CBDcex_Freiburg+GFP_Freiburg-primer-mix.
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**Gradient-PCR with CDBclos(T7)(9)+GFP_His-Template and CBDclos_Freiburg+GFP_Freiburg-primer-mix.
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===Wednesday September 19th===
===Wednesday September 19th===
* '''Team Cellulose Binding Domain:'''
* '''Team Cellulose Binding Domain:'''

Revision as of 21:01, 19 September 2012

Contents

Week 21 (09/17 - 09/23/12)

Monday September 17th

Tuesday September 18th

  • Team Cellulose Binding Domain:
    • Primer arrived:
    • Gradient-PCR with the CBDcex(T7)+GFP_His-plasmid and S3N10-CBDcex_RV and S3N10-GFP_FW primer-mix. the right product appeared only at 66,5°C; Lower: wrong product; Higher: no product
    • Following PCR at 66,5°C(50µL) Result: main product at 2 kbp
    • Alternativly took the 20 µL-tube with right product and added 0,5 µL DpnI for over-night digestion.
    • Gradient-PCR with CDBcex(T7)+GFP_His-Template and CBDcex_Freiburg+GFP_Freiburg-primer-mix.
    • Gradient-PCR with CDBclos(T7)(9)+GFP_His-Template and CBDclos_Freiburg+GFP_Freiburg-primer-mix.

Wednesday September 19th

  • Team Cellulose Binding Domain:
    • Stopped over-night-DpnI-digestion of S3N10-clos-GFP_his PCR-product and cleaned up in gel. Ligated the PCR-product with itself via Blunt-end-ligation and transformed it into KRX. Plated on Select-Agar.
    • Gradient-PCRs of the CDBcex(T7)+GFP-plasmid and a CBDclos(T7)+GFP-plasmid (unsequenced) with the CBDcex_Freiburg and GFP_Freiburg-compl and the CBDclos_Freiburg and GFP_Freiburg_compl primers, respectively. The CBDcex-setup showed no correct product, but the CBDclos-setup had the right bands at temperatures from 57°C to 64°C; merged the correct fractions and cleaned them up through the gel.
    • Digested the cleaned up product with SpeI and XbaI and DpnI.
    • Ligated J61101 and CBDclos with GFP_Freiburg and transformed it into KRX.

Thursday September 20th

Friday September 21st

Saturday September 22nd

Sunday September 23rd

Sunday


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