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Team:OUC-China/Modeling/Overview
From 2012.igem.org
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<p><span></span>Our model for ratio sensor and comparator consists of four parts: ODE analysis, parameter sensitivity analysis, parameter sweep, stochastic analysis. ODE analysis is to examine the feasibility of our project, which also provides the foundation for next 3 sections of analysis. Through parameter sensitivity analysis, the vital parameters for the system are distinguished. And we could figure out appropriate ranges of the identified sensitive parameters by parameter sweep. At last, noise analysis based on the fixed ranges of sensitive parameters could simulate the real conditions in vivo.<br/> | <p><span></span>Our model for ratio sensor and comparator consists of four parts: ODE analysis, parameter sensitivity analysis, parameter sweep, stochastic analysis. ODE analysis is to examine the feasibility of our project, which also provides the foundation for next 3 sections of analysis. Through parameter sensitivity analysis, the vital parameters for the system are distinguished. And we could figure out appropriate ranges of the identified sensitive parameters by parameter sweep. At last, noise analysis based on the fixed ranges of sensitive parameters could simulate the real conditions in vivo.<br/> | ||
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| - | <a><img style="margin-left: | + | <a href="https://2012.igem.org/Team:OUC-China/Modeling/ODEModel"><img style="margin-left:80px;" src="https://static.igem.org/mediawiki/2012/0/08/Ouc-modeling-math38.JPG"></a> |
| + | <a href="https://2012.igem.org/Team:OUC-China/Modeling/ParameterSensitivityAnalysis"><img style="margin-left:400px; margin-top: -210px;" src="https://static.igem.org/mediawiki/2012/5/5a/Ouc-modeling-math39.jpg"></a> | ||
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| + | <p style="font-size:90%; margin-left:100px; width:200px;"><a href="https://2012.igem.org/Team:OUC-China/Modeling/ODEModel">Feasibility via ODE simulation</a></p> | ||
| + | <p style="font-size:90%;margin-left:420px; width:200px; margin-top:-20px;"><a href="https://2012.igem.org/Team:OUC-China/Modeling/ParameterSensitivityAnalysis">Figure out sensitive parameters in ternary system based on given parameter set | ||
| + | </a></p> | ||
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| + | <a href="https://2012.igem.org/Team:OUC-China/Modeling/ParameterSweep"><img style="margin-left:80px;" src="https://static.igem.org/mediawiki/2012/d/d3/Ouc-modeling-math40.jpg"></a> | ||
| + | <a href="https://2012.igem.org/Team:OUC-China/Modeling/NoiseAnalysis"><img style="margin-left:400px; margin-top: -200px;" src="https://static.igem.org/mediawiki/2012/8/8e/Ouc-modeling-math41.JPG"></a> | ||
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| + | <p style="font-size:90%; margin-left:100px; width:200px;"><a href="https://2012.igem.org/Team:OUC-China/Modeling/ParameterSweep">Sweep important parameters for optimized range</a></p> | ||
| + | <p style="font-size:90%;margin-left:430px; width:200px; margin-top:-30px;"><a href="https://2012.igem.org/Team:OUC-China/Modeling/NoiseAnalysis">Noise analysis</a></p> | ||
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Revision as of 16:58, 26 September 2012
Overview
Our model for ratio sensor and comparator consists of four parts: ODE analysis, parameter sensitivity analysis, parameter sweep, stochastic analysis. ODE analysis is to examine the feasibility of our project, which also provides the foundation for next 3 sections of analysis. Through parameter sensitivity analysis, the vital parameters for the system are distinguished. And we could figure out appropriate ranges of the identified sensitive parameters by parameter sweep. At last, noise analysis based on the fixed ranges of sensitive parameters could simulate the real conditions in vivo.
Feasibility via ODE simulation
Figure out sensitive parameters in ternary system based on given parameter set
Sweep important parameters for optimized range
