Team:CBNU-Korea/Notebook
From 2012.igem.org
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<li class="PROJECT"><a | <li class="PROJECT"><a | ||
href="https://2012.igem.org/Team:CBNU-Korea/Project">PROJECT</a></li> | href="https://2012.igem.org/Team:CBNU-Korea/Project">PROJECT</a></li> | ||
- | <li class="NOTEBOOK"><a | + | <li class="NOTEBOOK"><a href="#">NOTEBOOK</a></li> |
- | + | ||
</ul> | </ul> | ||
<ul> | <ul> | ||
- | <li class="SAFETY"><a href="https://2012.igem.org/Team:CBNU-Korea/Safety">SAFETY</a></li> | + | <li class="SAFETY"><a |
+ | href="https://2012.igem.org/Team:CBNU-Korea/Safety">SAFETY</a></li> | ||
<li class="JUDGING"><a | <li class="JUDGING"><a | ||
href="https://2012.igem.org/Team:CBNU-Korea/JG/judging">JUDGING</a></li> | href="https://2012.igem.org/Team:CBNU-Korea/JG/judging">JUDGING</a></li> | ||
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<div id="CB_sub_menu"> | <div id="CB_sub_menu"> | ||
- | <ul> | + | <div id="CB_sub_mobile_menu">+ MENU</div> |
+ | <ul class="CB_ul"> | ||
<li class="li_NoteBook"><a href="#">01 + NoteBook</a></li> | <li class="li_NoteBook"><a href="#">01 + NoteBook</a></li> | ||
+ | <li id="li_sub" class="MA"><a href="#">- March, April</a></li> | ||
+ | <li id="li_sub" class="MJ"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/2">- May, June</a></li> | ||
+ | <li id="li_sub" class="July"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/3">- July</a></li> | ||
+ | <li id="li_sub" class="August"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/4">- August</a></li> | ||
+ | <li id="li_sub" class="September"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/5">- September</a></li> | ||
</ul> | </ul> | ||
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- | < | + | <h1>March - April</h1> |
- | + | ||
- | + | ||
- | + | ||
- | < | + | <h2>March. 26th – April. 1th</h2> |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | < | + | <p> |
- | - | + | <strong>Tuesday</strong> |
- | </ | + | </p> |
+ | <p> | ||
+ | ■CBNU-KOREA team is organized<br> ■Had first meeting<br> | ||
+ | ■Introduced about iGem & previous project of CBNU-KOREA | ||
+ | </p> | ||
- | <p> | + | <p> |
+ | <strong>Thursday</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | ■Planned plan of near future<br> ■(Start -> Find similar gene | ||
+ | comparing sequence by BLAST in 15 species(DEG) -> Certify between | ||
+ | ssential genes and result of BLAST -> Certify if it is equal or | ||
+ | over than 80% -> If it is, adjust to 1500 species.)<br> | ||
+ | ■Department of Computer engineering : Planned to study for the | ||
+ | possibilities of the automation of BLAST.<br> ■Department of | ||
+ | Statistics: Planned to calculate probability to be match between | ||
+ | BLAST results and experimently presumed essential genes.<br> | ||
+ | ■Department of Microbiology: Planned to study for the database of | ||
+ | NCBI(Variable of NC file). | ||
+ | </p> | ||
- | < | + | <p> |
- | + | <strong>Friday</strong> | |
- | + | </p> | |
- | + | <p> | |
- | + | ■Re-defined the name of the project of this year(BIDOB)<br> | |
- | + | ■Planned to presume essential brick using NCBI data. | |
- | </ | + | </p> |
- | |||
- | |||
- | |||
+ | <h2>Apr. 2nd – Apr. 8th</h2> | ||
+ | <p> | ||
+ | <strong>Tuesday</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | ■Parsed a data of 15 species in NCBI and built DB for a first | ||
+ | time.<br> ■Made a result of analysis and built it to DB.<br> | ||
+ | ■Planned to study to have a understandable reliability(%) on our | ||
+ | analysis. | ||
+ | </p> | ||
- | < | + | <p> |
- | + | <strong>Thursday</strong> | |
- | + | </p> | |
- | + | <p>Build DB of NCBI information.</p> | |
- | + | ||
- | + | ||
- | </ | + | |
<p> | <p> | ||
- | <strong> | + | <strong>Friday</strong> |
- | + | </p> | |
- | + | <p> | |
- | + | ■Presumption of Essential Gene : Grouped more than two species and | |
- | + | analyzed characteristic of each genome. Studied a EGGS Site.<br> | |
+ | ■Analysis of location, direction and array of essential gene : | ||
+ | Studied for organization analysis of statistic-biology. Studied | ||
+ | some of research paper.<br> ■Implementing viewer : Planned to | ||
+ | study for JAVA computer language. | ||
</p> | </p> | ||
+ | <p> | ||
+ | <strong>Saturday</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | ■Presumption of Essential Gene : Find species-EG by analyzing in | ||
+ | each species.<br> ■Presumption of Essential Gene : Find | ||
+ | Essential gene by analyzing result between species.<br> | ||
+ | ■Presumption of Essential Function : Analyze function of each | ||
+ | essential genes.<br> ■Analyzing the array of genes : Analyze | ||
+ | location and array of essential genes and every genes.<br> | ||
+ | ■Implement Viewer by built DB. | ||
+ | </p> | ||
</div> | </div> |
Latest revision as of 03:51, 27 September 2012
NOTEBOOK
- Notebook
March - April
March. 26th – April. 1th
Tuesday
■CBNU-KOREA team is organized
■Had first meeting
■Introduced about iGem & previous project of CBNU-KOREA
Thursday
■Planned plan of near future
■(Start -> Find similar gene
comparing sequence by BLAST in 15 species(DEG) -> Certify between
ssential genes and result of BLAST -> Certify if it is equal or
over than 80% -> If it is, adjust to 1500 species.)
■Department of Computer engineering : Planned to study for the
possibilities of the automation of BLAST.
■Department of
Statistics: Planned to calculate probability to be match between
BLAST results and experimently presumed essential genes.
■Department of Microbiology: Planned to study for the database of
NCBI(Variable of NC file).
Friday
■Re-defined the name of the project of this year(BIDOB)
■Planned to presume essential brick using NCBI data.
Apr. 2nd – Apr. 8th
Tuesday
■Parsed a data of 15 species in NCBI and built DB for a first
time.
■Made a result of analysis and built it to DB.
■Planned to study to have a understandable reliability(%) on our
analysis.
Thursday
Build DB of NCBI information.
Friday
■Presumption of Essential Gene : Grouped more than two species and
analyzed characteristic of each genome. Studied a EGGS Site.
■Analysis of location, direction and array of essential gene :
Studied for organization analysis of statistic-biology. Studied
some of research paper.
■Implementing viewer : Planned to
study for JAVA computer language.
Saturday
■Presumption of Essential Gene : Find species-EG by analyzing in
each species.
■Presumption of Essential Gene : Find
Essential gene by analyzing result between species.
■Presumption of Essential Function : Analyze function of each
essential genes.
■Analyzing the array of genes : Analyze
location and array of essential genes and every genes.
■Implement Viewer by built DB.