Team:Freiburg/Project

From 2012.igem.org

(Difference between revisions)
(4. Using the Toolkit)
Line 33: Line 33:
==[[Team:Freiburg/Project/Tal|4. Using the Toolkit]]==
==[[Team:Freiburg/Project/Tal|4. Using the Toolkit]]==
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">Create your own is the inoffical motto of our toolkit. Team freiGEM knows how to use it, but  </div>
+
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">Our overall goal is to empower future iGEM teams to use the most exciting new technology synthetic biology has to offer. We therefore not only invented the GATE assembly platform but wrote a step by step manual for super-easy custom TALE construction
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">Team freiGEM wants you to know it. Read this instruction and start working with the toolkit yourself
+
</div>
</div>
==[[Team:Freiburg/Project/Robot|4. The future TAL projects]]==
==[[Team:Freiburg/Project/Robot|4. The future TAL projects]]==
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">TAL effectors are so new that we cant even talk about a history of TAL, but we should talk about</div>
+
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">Until now, almost three years after deciphering the TALE code, only two types of TAL Effectors have been developed: TALENs and TAL-TFs. We herein propose additional classes of TAL effectors.
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">their future. Our toolkit is not just easy to use but also its easy to automatable, we can proof that our kit is </div>
+
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">easiely workable by a robot</div>
+
-
==[[Team:Freiburg/Project/Experiments|5. Experiments]]==
+
==[[Team:Freiburg/Project/Experiments|5. Experiments and Results]]==
 +
We not only rigorously tested if our in vitro TALE gene assembly method works but also if our TALE constructs actually work in a human cell line. Check out test design and results.
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">What is building without testing, and the mother of all tests is the biological experiment.</div>
 
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">You dont believe in our kit like we do? Look how we tested it, get inside on the experiment design and the  </div>
 
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">theory behind the methods.</div>
 
-
 
-
==[[Team:Freiburg/Project/Results|6. Results]]==
 
-
 
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;">But where is the proof? Here is the proof! Get data on our toolkit, learn how to read sequencing</div>
 
-
<div style="color: #1C649F; font-size: 14px;font-family: Gill Sans MT; text-indent:30px;"> and see the results of trials with the toolkit.</div>
 
<!--- The Mission, Experiments --->
<!--- The Mission, Experiments --->

Revision as of 02:17, 26 September 2012




Project



Projectsymbol.png


Overall project

Since June 2012, we are working in the field of so called TAL effectors in our lab. TAL effectors are molecular components that are fused to DNA binding proteins in order to restrict their acticvity to specific loci in a genome. In particular, we develop a strategy to cheaply create novel TAL effectors in an extremely short period of time. This new method will enable us to test numerous novel effectors in human cells and to assess their therapeutic potential for genetic diseases, epigenetic alterations and cancer.

We hope you will learn something about our project and the power of TAL effectors.

0. Introduction

You don't know what TAL effectors actually are? We reviewed the recent literature for you, to give you a quick
overview of this exciting new field of research.

1. Golden Gate Standard

Assembling multiple gene constructs in frame without leaving scars is not possible with existing iGEM standards. We
therefore introduce the new Golden Gate
Standard that is fully compatible with RFC 10.

2. The TAL Vector

Targeting a sequence and not doing something to it, is like throwing mechanics at your car. Your car will
not get any better only the mechanics will get mad. Because we know this, we bring the tools you
need to actually work with DNA.To make it even more easy these tools are deliverd already inside the
final TAL backbone, just add the sequence and you're ready.

3. GATE Assembly Kit

We have invented a super-fast, super-easy and super-cheap Method for custom TAL effector construction. Learn about
the theory behind the TAL effector toolkit, how we created it and why we choose this design.

4. Using the Toolkit

Our overall goal is to empower future iGEM teams to use the most exciting new technology synthetic biology has to offer. We therefore not only invented the GATE assembly platform but wrote a step by step manual for super-easy custom TALE construction

4. The future TAL projects

Until now, almost three years after deciphering the TALE code, only two types of TAL Effectors have been developed: TALENs and TAL-TFs. We herein propose additional classes of TAL effectors.

5. Experiments and Results

We not only rigorously tested if our in vitro TALE gene assembly method works but also if our TALE constructs actually work in a human cell line. Check out test design and results.