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Team:St Andrews/Human-practices
From 2012.igem.org
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<h1>Scientific impact of iGEM</h1> | <h1>Scientific impact of iGEM</h1> | ||
| - | <p class="lead">" | + | <p class="lead">"<em>most influential synthetic biology competition</em>" vs. "<em>kids' playground</em>"</p> |
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Revision as of 14:29, 23 July 2012
Scientific impact of iGEM
"most influential synthetic biology competition" vs. "kids' playground"
Introduction
We investigated the scientific attention garnered by iGEM and the Registry of Standard Parts. A data-driven approach was chosen: We extracted data from search results to various queries (such as ("iGEM" OR "International Genetically Engineered Machine") AND ("synthetic biology" OR "genetic engineering")) from various publication search engines. We searched Web of Knowledge, Scopus, PubMed and Google Scholar. Google Scholar was chosen due to the alternatives' various shortcomings.
We conclude with hypotheses to explain the results and discuss their implications for the iGEM competition.
[TODO: Summary of findings]
Data collection
Why Google Scholar? (Why not Web of Knowledge, Scopus, PubMed?)
As iGEM is somewhat of a niche topic and WoK, Scopus and PubMed are strictly curated and limited in scope, they missed many obviously relevant publications. We also found their search options unsuitable: They often did not support full text search (they looked only at titles, keywords and abstracts) or boolean operators. These were a requirement: iGEM cannot be expected to always be the main subject of a paper, hence full text search. There are many relevant terms floating about iGEM, hence boolean operators like "OR" to allow treating papers that contain "International Genetically Engineered Machine" or the acronym "iGEM" equally. Google Scholar had none of these drawbacks.
What sort of scope range are we talking about here? This range: PubMed gave so few results (16 for iGEM genetic*) that we quickly discarded it. Manually merging the Web of Knowledge and Scopus results for the query iGEM AND genetic* (discarding irrelevant results) gave 43 results. Then we queried Google Scholar. It gave us 770 for (“synthetic biology” OR "genetic engineering") AND (“iGEM” OR “International Genetically Engineered Machine"). Imagine our faces.
Of course, Google Scholar too is but a bronze bullet: It brings its own drawbacks. It is engineered to pick up things that only seem like scholarly articles. Like Google's search results in general, the results are not curated by a human. This has been criticised in the literature. Also we found the occasional hilarious total miss. Google Scholar is also known to somewhat overestimate citation counts. However, we concluded from empirical manual examination of a random sample that the majority of the results are plausible and (most importantly) far greater in scope than searches in curated databases. We want to identify trends and for that, large and coarce pieces suffice.
Summary of queries we ran
Here's a quick breakdown of what we queried for on Google Scholar and what sort of data was returned.
| Plain English query | Query | Nº Papers | Nº Citations | h-index | g-index | Query date |
|---|---|---|---|---|---|---|
| Papers mentioning iGEM | iGEM OR "International Genetically Engineered Machine" |
1000 | 9095 | 36 | 64 | 17/7/2012 |
| Papers mentioning iGEM and Registry | ("iGEM" OR "International Genetically Engineered Machine") AND("Registry of Standard Biological Parts" OR "partsregistry.org" OR "parts.mit.edu") |
330 | 2208 | 23 | 42 | 17/7/2012 |
| Papers mentioning iGEM in context of synbio | (“synthetic biology” OR "genetic engineering") AND (“iGEM” OR “International Genetically Engineered Machine") |
770 | 3253 | 26 | 45 | 17/7/2012 |
| All synthetic biology | synthetic biology |
1000 | 68482 | 127 | 214 | 17/7/2012 |
| Papers mentioning Registry of Parts | "Registry of Standard Biological Parts" OR "partsregistry.org" OR "parts.mit.edu" |
751 | 6442 | 39 | 69 | 17/7/2012 |
| Papers citing a particular Part | partsregistry.org/Part: |
54 | 263 | 5 | 16 | 17/7/2012 |
Note that searches were capped at a maximum of 1000 results. Hence getting 100 results for a query implies that more exist! Those first 1000 are only the ones the search engine judged most relevant.
Data analysis
Let's have a look at the actual data then... [[ TODO. What are the values of each column in the documents 1-6? Let's make the tables public, right? ]]
Old data (in case it still becomes useful)
| Authors | Title | Year | Source title | Cited by |
| Boyle P.M.; Burrill D.R.; Inniss M.C.; Agapakis C.M.; Deardon A.; DeWerd J.G.; Gedeon M.A.; Quinn J.Y.; Paull M.L.; Raman A.M.; Theilmann M.R.; Wang L.; Winn J.C.; Medvedik O.; Schellenberg K.; Haynes K.A.; Viel A.; Brenner T.J.; Church G.M.; Shah J.V.; Silver P.A. | A BioBrick compatible strategy for genetic modification of plants | 2012 | Journal of Biological Engineering | |
| Hesselman M.C.; Odoni D.I.; Ryback B.M.; de Groot S.; van Heck R.G.A.; Keijsers J.; Kolkman P.; Nieuwenhuijse D.; van Nuland Y.M.; Sebus E.; Spee R.; de Vries H.; Wapenaar M.T.; Ingham C.J.; Schroen K.; Martins dos Santos V.A.P.; Spaans S.K.; Hugenholtz F.; van Passel M.W.J. | A multi-platform flow device for microbial (co-) cultivation and microscopic analysis | 2012 | PLoS ONE | |
| Materi W. | Leading a successful iGEM team | 2012 | Methods in Molecular Biology | |
| Ho-Shing O.; Lau K.H.; Vernon W.; Eckdahl T.T.; Campbell A.M. | Assembly of standardized DNA parts using biobrick ends in E. coli | 2012 | Methods in Molecular Biology | |
| Giavitto J.-L. | The modeling and the simulation of the fluid machines of synthetic biology | 2012 | Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) | |
| Muller K.M.; Arndt K.M. | Standardization in synthetic biology | 2012 | Methods in Molecular Biology | |
| Kuldell N. | Living machines: Some assembly required: Kit-based competitions challenge teams of students to learn microbiology and design principles in the context of synthetic biology | 2012 | Microbe | |
| Stewart D.; Wilson-Kanamori J.R. | Modular modelling in synthetic biology: Light-based communication in E. coli | 2011 | Electronic Notes in Theoretical Computer Science | |
| Dixon J.; Kuldell N. | BioBuilding: Using banana-scented bacteria to teach synthetic biology | 2011 | Methods in Enzymology | 1 |
| Mitchell R.; Dori Y.J.; Kuldell N.H. | Experiential Engineering Through iGEM-An Undergraduate Summer Competition in Synthetic Biology | 2011 | Journal of Science Education and Technology | |
| Dress L. | iGEM 2010: Synthetic biologists compete for the future | 2010 | Industrial Biotechnology | |
| Hafner S. | IGEM 2009: Synthethic biology and ethics [Les iGEM 2009 la biologie synth-éthique] | 2010 | Medecine/Sciences | 2 |
| Gu X.; Trybilo M.; Ramsay S.; Jensen M.; Fulton R.; Rosser S.; Gilbert D. | Engineering a novel self-powering electrochemical biosensor | 2010 | Systems and Synthetic Biology | |
| Cai Y.; Wilson M.L.; Peccoud J. | GenoCAD for iGEM: A grammatical approach to the design of standard-compliant constructs | 2010 | Nucleic Acids Research | 12 |
| Cooling M.T.; Rouilly V.; Misirli G.; Lawson J.; Yu T.; Hallinan J.; Wipat A. | Standard virtual biological parts: A repository of modular modeling components for synthetic biology | 2010 | Bioinformatics | 10 |
| Smolke C.D. | Building outside of the box: IGEM and the BioBricks Foundation | 2009 | Nature Biotechnology | 15 |
| Hafner S. | iGEM competition 2008; two French teams! [Compétition iGEM 2008: Deux équipes françaises!] | 2009 | Medecine/Sciences | 2 |
| Jerala R. | I like iGEM | 2009 | Scientist | |
| Edwards C. | The gene machines | 2008 | Engineering and Technology | |
| Bikard D.; Kepes F. | First French team success during iGEM Synthetic biology competition [Succès de la première équipe française lors de la compétition iGEM de biologie synthétique] | 2008 | Medecine/Sciences | 6 |
| Bachman R. | An iGEM of an idea? [2] | 2008 | Scientist | |
| Kaczkowski P. | An iGEM of an idea? [1] | 2008 | Scientist | |
| Goodman C. | Engineering ingenuity at iGEM | 2008 | Nature Chemical Biology | 16 |
| Gallagher R. | An iGEM of an idea | 2007 | Scientist | 2 |
| Brown J. | The iGEM competition: Building with biology | 2007 | IET Synthetic Biology | 7 |
| Haynes K.A.; Broderick M.L.; Brown A.D.; Butner T.L.; Harden L.; Heard L.; Jessen E.; Malloy K.; Ogden B.; Rosemond S.; Simpson S.; Zwack E.; Campbell A.M.; Eckdahl T.; Heyer L.J.; Poet J.L. | Computing with living hardware | 2007 | IET Synthetic Biology | 2 |
| Dabholkar S.; Thattai M. | Brainstorming biology | 2007 | IET Synthetic Biology | 1 |
| Brown T.; Chang C.; Heinze B.; Hollinger P.; Kittleson J.; MacDow K.; Reavis D.; Curry J.; Riley M. | Development of an inducible three colour bacterial water colour system | 2007 | IET Synthetic Biology | 1 |
| Rodrigo G.; Montagud A.; Aparici A.; Aroca M.C.; Baguena M.; Carrera J.; Edo C.; Fernandez-De-Cordoba P.; Ferrando A.; Fuertes G.; Gimenez D.; Mata C.; Medrano J.V.; Navarrete C.; Navarro E.; Salgado J.; Tortosa P.; Urchueguia J.; Jaramillo A. | Vanillin cell sensor | 2007 | IET Synthetic Biology | 1 |
| Quiroz J.N.A.; Flores R.B.; Cisneros T.G.B.; Rosales I.Y.F.; Naranjo A.G.; Sanchez J.C.G.; Jimenez M.E.G.; Padilla R.E.G.; Baena A.J.L.; Hernandez P.A.L.; Padilla P.G.; Miller R.P.; Gaspar I.N.R.; Chico J.C.R.; Martinez A.R.; Romero J.P.; Arzate A.S.; Barradas J.S.A.; Diaz D.A.; Bracho A.B.; Benitez C.; Arteag C.I.F.; Quiroz F.H.; Martinez G.J.; Rabadan J.L.; Salvador M.C.O.; Longoria P.P.; Orozco R.P.; Corona F.R.; Majarrez E.S.; Hassan E.S.; Sanchez C.S.; Saldana U.V.; Segura P.B.Z. | Biological implementation of algorithms and unconventional computing | 2007 | IET Synthetic Biology | |
| King P.; Lavrovsky V.; Von Mammen S.; Jacob C. | Teaching bacteria how to dance | 2007 | IET Synthetic Biology | |
| Badalamenti J.P.; Weiss L.E.; Buckno C.J.; Richard T.L.; Weiss P.S.; Cirino P.C. | Synthetic sports: A bacterial relay race | 2007 | IET Synthetic Biology | 1 |
| Lohmueller J.; Neretti N.; Hickey B.; Kaka A.; Gao A.; Lemon J.; Lattanzi V.; Goldstein P.; Tam L.-K.; Schmidt M.; Brodsky A.S.; Haberstroh K.; Morgan J.; Palmore T.; Wessel G.; Jaklenec A.; Urabe H.; Gagnon J.; Cumbers J. | Progress toward construction and modelling of a tri-stable toggle switch in E. coli | 2007 | IET Synthetic Biology | 2 |
| Ravi M.; Ngeleka M.; Kim S.-H.; Gyles C.; Berthiaume F.; Mourez M.; Middleton D.; Simko E. | Contribution of AIDA-I to the pathogenicity of a porcine diarrheagenic Escherichia coli and to intestinal colonization through biofilm formation in pigs | 2007 | Veterinary Microbiology | 10 |
| Authors | Title | Year | Source title | Cited by |
| Cooling, M. T.; Rouilly, V.; Misirli, G.; Lawson, J.; Yu, T.; Hallinan, J.; Wipat, A. | Standard virtual biological parts: a repository of modular modeling components for synthetic biology | 2010 | BIOINFORMATICS | Not collected |
| Mitchell, Rudolph; Dori, Yehudit Judy; Kuldell, Natalie H. | Experiential Engineering Through iGEM-An Undergraduate Summer Competition in Synthetic Biology | 2011 | JOURNAL OF SCIENCE EDUCATION AND TECHNOLOGY | Not collected |
| Haefner, Sophia | iGEM competition 2008, two French teams! | 2009 | M S-MEDECINE SCIENCES | Not collected |
| Bikard, David; Kepes, Francois | First French team success during iGEM synthetic biology competition | 2008 | M S-MEDECINE SCIENCES | Not collected |
| Hafner, Sophia | [IGEM 2009: synthetic biology and ethics]. | 2010 | Medecine sciences : M/S | Not collected |
| Dixon, James; Kuldell, Natalie | BIOBUILDING: USING BANANA-SCENTED BACTERIA TO TEACH SYNTHETIC BIOLOGY | 2011 | METHODS IN ENZYMOLOGY, VOL 497: SYNTHETIC BIOLOGY, METHODS FOR PART/DEVICE CHARACTERIZATION AND CHASSIS ENGINEERING, PT A | Not collected |
| Ho-Shing, Olivia; Lau, Kin H; Vernon, William; Eckdahl, Todd T; Campbell, A Malcolm | Assembly of standardized DNA parts using BioBrick ends in E. coli. | 2012 | Methods in molecular biology (Clifton, N.J.) | Not collected |
| Materi, Wayne | Leading a successful iGEM team. | 2012 | Methods in molecular biology (Clifton, N.J.) | Not collected |
| Muller, Kristian M; Arndt, Katja M | Standardization in synthetic biology. | 2012 | Methods in molecular biology (Clifton, N.J.) | Not collected |
| Smolke, Christina D. | Building outside of the box: iGEM and the BioBricks Foundation | 2009 | NATURE BIOTECHNOLOGY | Not collected |
| Goodman, Catherine | Engineering ingenuity at iGEM | 2008 | NATURE CHEMICAL BIOLOGY | Not collected |
| Cai, Yizhi; Wilson, Mandy L.; Peccoud, Jean | GenoCAD for iGEM: a grammatical approach to the design of standard-compliant constructs | 2010 | NUCLEIC ACIDS RESEARCH | Not collected |
| Hesselman, Matthijn C; Odoni, Dorett I; Ryback, Brendan M; de Groot, Suzette; van Heck, Ruben G A; Keijsers, Jaap; Kolkman, Pim; Nieuwenhuijse, David; van Nuland, Youri M; Sebus, Erik; Spee, Rob; de Vries, Hugo; Wapenaar, Marten T; Ingham, Colin J; Schroen, Karin; Martins Dos Santos, Vitor A P; Spaans, Sebastiaan K; Hugenholtz, Floor; van Passel, Mark W J | A multi-platform flow device for microbial (co-) cultivation and microscopic analysis. | 2012 | PloS one | Not collected |
| Vinson, Valda | iGEM 2010 Jamboree | 2010 | SCIENCE | Not collected |
| Jerala, Roman | I like iGEM | 2009 | SCIENTIST | Not collected |
| Bachman, Robert | An iGEM of an idea? | 2008 | SCIENTIST | Not collected |
| Kaczkowski, Peter | An iGEM of an idea? | 2008 | SCIENTIST | Not collected |
| Gallagher, Richard | An iGEM of an Idea - How to get students to go into science | 2007 | SCIENTIST | Not collected |
| Mueller, Kristian M.; Arndt, Katja M. | Standardization in Synthetic Biology | 2011 | SYNTHETIC GENE NETWORKS: METHODS AND PROTOCOLS | Not collected |
| Gu, X; Trybilo, M; Ramsay, S; Jensen, M; Fulton, R; Rosser, S; Gilbert, D | Engineering a novel self-powering electrochemical biosensor. | 2010 | Systems and synthetic biology | Not collected |
| Authors | Title | Year | Source title | Cited by |
| Anderson, J. Christopher, John Dueber, Mariana Leguia, Gabriel Wu, Jonathan Goler, Adam Arkin, and Jay Keasling. | BglBricks: A Flexible Standard for Biological Part Assembly. | 2010 | Journal of Biological Engineering | No data |
| Baumgardner, Jordan, Karen Acker, Oyinade Adefuye, Samuel Crowley, Will DeLoache, James Dickson, Lane Heard, et al. | Solving a Hamiltonian Path Problem with a Bacterial Computer. | 2009 | Journal of Biological Engineering | No data |
| Chen, Joanna, Douglas Densmore, Timothy Ham, Jay Keasling, and Nathan Hillson. | DeviceEditor Visual Biological CAD Canvas. | 2012 | Journal of Biological Engineering | No data |
| Hatch, Alex. | Four Suggestions for Addressing Public Concern Regarding Synthetic Biology | 2010 | Journal of Biological Engineering | No data |
| Haynes, Karmella, Marian Broderick, Adam Brown, Trevor Butner, James Dickson, W. Lance Harden, Lane Heard, et al. | Engineering Bacteria to Solve the Burnt Pancake Problem. | 2008 | Journal of Biological Engineering | No data |
| Kelly, Jason, Adam Rubin, Joseph Davis, Caroline Ajo-Franklin, John Cumbers, Michael Czar, Kim de Mora, Aaron Glieberman, Dileep Monie, and Drew Endy. | Measuring the Activity of BioBrick Promoters Using an in Vivo Reference Standard. | 2009 | Journal of Biological Engineering | No data |
| Kuldell, Natalie. | Authentic Teaching and Learning Through Synthetic Biology. | 2007 | Journal of Biological Engineering | No data |
| Norville, Julie, Ratmir Derda, Saurabh Gupta, Kelly Drinkwater, Angela Belcher, Andres Leschziner, and Thomas Knight. | Introduction of Customized Inserts for Streamlined Assembly and Optimization of BioBrick Synthetic Genetic Circuits. | 2010 | Journal of Biological Engineering | No data |
| Pasotti, Lorenzo, Susanna Zucca, Manuel Lupotto, Maria Cusella De Angelis, and Paolo Magni. | Characterization of a Synthetic Bacterial Self-destruction Device for Programmed Cell Death and for Recombinant Proteins Release. | 2011 | Journal of Biological Engineering | No data |
| Pearson, Brianna, Sam Snell, Kyri Bye-Nagel, Scott Tonidandel, Laurie Heyer, and A. Malcolm Campbell. | Word Selection Affects Perceptions of Synthetic Biology. | 2011 | Journal of Biological Engineering | No data |
| Shetty, Reshma, Drew Endy, and Thomas Knight. | Engineering BioBrick Vectors from BioBrick Parts. | 2008 | Journal of Biological Engineering | No data |
| Speer, Michael, and Tom Richard. | Amplified Insert Assembly: An Optimized Approach to Standard Assembly of BioBrickTM Genetic Circuits. | 2011 | Journal of Biological Engineering | No data |
| Authors | Title | Year | Source title | Cited by |
| J. Brown | The iGEM competition: building with biology | 2007 | IET Synthetic Biology | No data |
| P. King | Teaching bacteria how to dance | 2007 | IET Synthetic Biology | No data |
| J.P. Badalamenti | Synthetic sports: a bacterial relay race | 2007 | IET Synthetic Biology | No data |
| S. Dabholkar | Brainstorming biology | 2007 | IET Synthetic Biology | No data |
| T. Brown | Development of an inducible three colour bacterial water colour system | 2007 | IET Synthetic Biology | No data |
| J. Lohmueller | Progress toward construction and modelling of a tri-stable toggle switch in E. coli | 2007 | IET Synthetic Biology | No data |
| K.A. Haynes | Computing with living hardware | 2007 | IET Synthetic Biology | No data |
| J.N. Argota Quiróz | Biological implementation of algorithms and unconventional computing | 2007 | IET Synthetic Biology | No data |
| G. Rodrigo | Vanillin cell sensor | 2007 | IET Synthetic Biology | No data |
| Authors | Title | Year | Source title | Cited by |
| Kuldell, Natalie. | Authentic Teaching and Learning Through Synthetic Biology. | 2007 | Journal of Biological Engineering | No data |
| Haynes, Karmella, Marian Broderick, Adam Brown, Trevor Butner, James Dickson, W. Lance Harden, Lane Heard, et al. | Engineering Bacteria to Solve the Burnt Pancake Problem. | 2008 | Journal of Biological Engineering | No data |
| Shetty, Reshma, Drew Endy, and Thomas Knight. | Engineering BioBrick Vectors from BioBrick Parts. | 2008 | Journal of Biological Engineering | No data |
| Baumgardner, Jordan, Karen Acker, Oyinade Adefuye, Samuel Crowley, Will DeLoache, James Dickson, Lane Heard, et al. | Solving a Hamiltonian Path Problem with a Bacterial Computer. | 2009 | Journal of Biological Engineering | No data |
| Kelly, Jason, Adam Rubin, Joseph Davis, Caroline Ajo-Franklin, John Cumbers, Michael Czar, Kim de Mora, Aaron Glieberman, Dileep Monie, and Drew Endy. | Measuring the Activity of BioBrick Promoters Using an in Vivo Reference Standard. | 2009 | Journal of Biological Engineering | No data |
| Anderson, J. Christopher, John Dueber, Mariana Leguia, Gabriel Wu, Jonathan Goler, Adam Arkin, and Jay Keasling. | BglBricks: A Flexible Standard for Biological Part Assembly. | 2010 | Journal of Biological Engineering | No data |
| Hatch, Alex. | Four Suggestions for Addressing Public Concern Regarding Synthetic Biology | 2010 | Journal of Biological Engineering | No data |
| Norville, Julie, Ratmir Derda, Saurabh Gupta, Kelly Drinkwater, Angela Belcher, Andres Leschziner, and Thomas Knight. | Introduction of Customized Inserts for Streamlined Assembly and Optimization of BioBrick Synthetic Genetic Circuits. | 2010 | Journal of Biological Engineering | No data |
| Pasotti, Lorenzo, Susanna Zucca, Manuel Lupotto, Maria Cusella De Angelis, and Paolo Magni. | Characterization of a Synthetic Bacterial Self-destruction Device for Programmed Cell Death and for Recombinant Proteins Release. | 2011 | Journal of Biological Engineering | No data |
| Pearson, Brianna, Sam Snell, Kyri Bye-Nagel, Scott Tonidandel, Laurie Heyer, and A. Malcolm Campbell. | Word Selection Affects Perceptions of Synthetic Biology. | 2011 | Journal of Biological Engineering | No data |
| Speer, Michael, and Tom Richard. | Amplified Insert Assembly: An Optimized Approach to Standard Assembly of BioBrickTM Genetic Circuits. | 2011 | Journal of Biological Engineering | No data |
| Chen, Joanna, Douglas Densmore, Timothy Ham, Jay Keasling, and Nathan Hillson. | DeviceEditor Visual Biological CAD Canvas. | 2012 | Journal of Biological Engineering | No data |
| Vinson, Valda | iGEM 2010 Jamboree | 2010 | SCIENCE | Not collected |
| Goodman C. | Engineering ingenuity at iGEM | 2008 | Nature Chemical Biology | 16 |
| Smolke C.D. | Building outside of the box: IGEM and the BioBricks Foundation | 2009 | Nature Biotechnology | 15 |
| Cai Y., Wilson M.L., Peccoud J. | GenoCAD for iGEM: A grammatical approach to the design of standard-compliant constructs | 2010 | Nucleic Acids Research | 12 |
| Ravi M., Ngeleka M., Kim S.-H., Gyles C., Berthiaume F., Mourez M., Middleton D., Simko E. | Contribution of AIDA-I to the pathogenicity of a porcine diarrheagenic Escherichia coli and to intestinal colonization through biofilm formation in pigs | 2007 | Veterinary Microbiology | 10 |
| Cooling M.T., Rouilly V., Misirli G., Lawson J., Yu T., Hallinan J., Wipat A. | Standard virtual biological parts: A repository of modular modeling components for synthetic biology | 2010 | Bioinformatics | 10 |
| Brown J. | The iGEM competition: Building with biology | 2007 | IET Synthetic Biology | 7 |
| Bikard D., Kepes F. | First French team success during iGEM Synthetic biology competition [Succès de la première équipe française lors de la compétition iGEM de biologie synthétique] | 2008 | Medecine/Sciences | 6 |
| Gallagher R. | An iGEM of an idea | 2007 | Scientist | 2 |
| Haynes K.A., Broderick M.L., Brown A.D., Butner T.L., Harden L., Heard L., Jessen E., Malloy K., Ogden B., Rosemond S., Simpson S., Zwack E., Campbell A.M., Eckdahl T., Heyer L.J., Poet J.L. | Computing with living hardware | 2007 | IET Synthetic Biology | 2 |
| Lohmueller J., Neretti N., Hickey B., Kaka A., Gao A., Lemon J., Lattanzi V., Goldstein P., Tam L.-K., Schmidt M., Brodsky A.S., Haberstroh K., Morgan J., Palmore T., Wessel G., Jaklenec A., Urabe H., Gagnon J., Cumbers J. | Progress toward construction and modelling of a tri-stable toggle switch in E. coli | 2007 | IET Synthetic Biology | 2 |
| Hafner S. | iGEM competition 2008, two French teams! [Compétition iGEM 2008: Deux équipes françaises!] | 2009 | Medecine/Sciences | 2 |
| Hafner S. | IGEM 2009: Synthethic biology and ethics [Les iGEM 2009 la biologie synth-éthique] | 2010 | Medecine/Sciences | 2 |
| Dabholkar S., Thattai M. | Brainstorming biology | 2007 | IET Synthetic Biology | 1 |
| Brown T., Chang C., Heinze B., Hollinger P., Kittleson J., MacDow K., Reavis D., Curry J., Riley M. | Development of an inducible three colour bacterial water colour system | 2007 | IET Synthetic Biology | 1 |
| Rodrigo G., Montagud A., Aparici A., Aroca M.C., Baguena M., Carrera J., Edo C., Fernandez-De-Cordoba P., Ferrando A., Fuertes G., Gimenez D., Mata C., Medrano J.V., Navarrete C., Navarro E., Salgado J., Tortosa P., Urchueguia J., Jaramillo A. | Vanillin cell sensor | 2007 | IET Synthetic Biology | 1 |
| Badalamenti J.P., Weiss L.E., Buckno C.J., Richard T.L., Weiss P.S., Cirino P.C. | Synthetic sports: A bacterial relay race | 2007 | IET Synthetic Biology | 1 |
| Dixon J., Kuldell N. | BioBuilding: Using banana-scented bacteria to teach synthetic biology | 2011 | Methods in Enzymology | 1 |
| Quiroz J.N.A., Flores R.B., Cisneros T.G.B., Rosales I.Y.F., Naranjo A.G., Sanchez J.C.G., Jimenez M.E.G., Padilla R.E.G., Baena A.J.L., Hernandez P.A.L., Padilla P.G., Miller R.P., Gaspar I.N.R., Chico J.C.R., Martinez A.R., Romero J.P., Arzate A.S., Barradas J.S.A., Diaz D.A., Bracho A.B., Benitez C., Arteag C.I.F., Quiroz F.H., Martinez G.J., Rabadan J.L., Salvador M.C.O., Longoria P.P., Orozco R.P., Corona F.R., Majarrez E.S., Hassan E.S., Sanchez C.S., Saldana U.V., Segura P.B.Z. | Biological implementation of algorithms and unconventional computing | 2007 | IET Synthetic Biology | 0 |
| King P., Lavrovsky V., Von Mammen S., Jacob C. | Teaching bacteria how to dance | 2007 | IET Synthetic Biology | 0 |
| Edwards C. | The gene machines | 2008 | Engineering and Technology | 0 |
| Bachman R. | An iGEM of an idea? [2] | 2008 | Scientist | 0 |
| Kaczkowski P. | An iGEM of an idea? [1] | 2008 | Scientist | 0 |
| Jerala R. | I like iGEM | 2009 | Scientist | 0 |
| Dress L. | iGEM 2010: Synthetic biologists compete for the future | 2010 | Industrial Biotechnology | 0 |
| Gu X., Trybilo M., Ramsay S., Jensen M., Fulton R., Rosser S., Gilbert D. | Engineering a novel self-powering electrochemical biosensor | 2010 | Systems and Synthetic Biology | 0 |
| Stewart D., Wilson-Kanamori J.R. | Modular modelling in synthetic biology: Light-based communication in E. coli | 2011 | Electronic Notes in Theoretical Computer Science | 0 |
| Mitchell R., Dori Y.J., Kuldell N.H. | Experiential Engineering Through iGEM-An Undergraduate Summer Competition in Synthetic Biology | 2011 | Journal of Science Education and Technology | 0 |
| Boyle P.M., Burrill D.R., Inniss M.C., Agapakis C.M., Deardon A., DeWerd J.G., Gedeon M.A., Quinn J.Y., Paull M.L., Raman A.M., Theilmann M.R., Wang L., Winn J.C., Medvedik O., Schellenberg K., Haynes K.A., Viel A., Brenner T.J., Church G.M., Shah J.V., Silver P.A. | A BioBrick compatible strategy for genetic modification of plants | 2012 | Journal of Biological Engineering | 0 |
| Hesselman M.C., Odoni D.I., Ryback B.M., de Groot S., van Heck R.G.A., Keijsers J., Kolkman P., Nieuwenhuijse D., van Nuland Y.M., Sebus E., Spee R., de Vries H., Wapenaar M.T., Ingham C.J., Schroen K., Martins dos Santos V.A.P., Spaans S.K., Hugenholtz F., van Passel M.W.J. | A multi-platform flow device for microbial (co-) cultivation and microscopic analysis | 2012 | PLoS ONE | 0 |
| Materi W. | Leading a successful iGEM team | 2012 | Methods in Molecular Biology | 0 |
| Ho-Shing O., Lau K.H., Vernon W., Eckdahl T.T., Campbell A.M. | Assembly of standardized DNA parts using biobrick ends in E. coli | 2012 | Methods in Molecular Biology | 0 |
| Giavitto J.-L. | The modeling and the simulation of the fluid machines of synthetic biology | 2012 | Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) | 0 |
| Muller K.M., Arndt K.M. | Standardization in synthetic biology | 2012 | Methods in Molecular Biology | 0 |
| Kuldell N. | Living machines: Some assembly required: Kit-based competitions challenge teams of students to learn microbiology and design principles in the context of synthetic biology | 2012 | Microbe | 0 |
Graphs (currently nonsense test data)
hi
