Team:Austin Texas/Plasmids and Strains

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Revision as of 02:12, 27 June 2012 by Benslater (Talk | contribs)

Plasmid Database

All plasmid stocks are in the –20°C freezer. Slots are labelled 1 through 81 in each box.

Box Label Name Part Plasmid Source Sequence Added by
Plasmid Box 1 cadA ASKA cadA plasmid Barrick Lab
Plasmid Box 1 ldcC ASKA ldcC plasmid Barrick Lab
Plasmid Box 1 IGM001 LasR Promoter [http://partsregistry.org/Part:BBa_R0079 BBa_R0079] pSB1A2 2012 kit plate 1 (12A) Verified Razan
Plasmid Box 1 IGM002 LasR [http://partsregistry.org/Part:BBa_C0079 BBa_C0079] pSB3K3 2012 kit plate 1 (14J) Verified Razan
Plasmid Box 1 IGM003 Lac Promoter [http://partsregistry.org/Part:BBa_R0010 BBa_R0010] pSB1A2 2012 kit plate 1 (1D) Razan
Plasmid Box 1 IGM004 GFP [http://partsregistry.org/Part:BBa_I714891 BBa_I714891] pSB3K3 2012 kit plate 2 (15L) Verified Ben
Plasmid Box 1 IGM005 RFP (use IGM021 instead) [http://partsregistry.org/Part:BBa_K081014 BBa_K081014] pSB1AK3 2012 kit plate 3 (12O) Verified Ben
Plasmid Box 1 IGM006 LasI [http://partsregistry.org/Part:BBa_K081009 BBa_K081009] pSB1A2 2012 kit plate 2 (10N) Verified Ben
Plasmid Box 1 IGM007 RBS + LacI [http://partsregistry.org/Part:BBa_J24679 BBa_J24679] pSB1A2 2012 kit plate 1 (7L) Aurko
Plasmid Box 1 IGM008 Double terminator (BBa_B0010 - BBa_B0012) [http://partsregistry.org/Part:BBa_B0015 BBa_B0015] pSB1AK3 2012 kit plate 1 (23L) Aurko
Plasmid Box 1 IGM009 J23100 promoter - sfGFP (Part:BBa_K515105) [http://partsregistry.org/wiki/index.php?title=Part:BBa_K515105 BBa_K515105] pSB1C3 2012 kit plate 5 (1K)
Plasmid Box 1 IGM014 Plasmid pSB1A3 backbone with RFP Insert [http://partsregistry.org/Part:BBa_J04450 BBa_J04450] pSB1A3 2012 kit plate 1 (1G) Logan
Plasmid Box 1 IGM015 Plasmid pSB1C3 backbone with RFP Insert [http://partsregistry.org/Part:BBa_J04450 BBa_J04450] pSB1C3 2012 kit plate 1 (3A) Logan
Plasmid Box 1 IGM016 Plasmid pSB1K3 backbone with RFP Insert [http://partsregistry.org/Part:BBa_J04450 BBa_J04450] pSB1K3 2012 kit plate 1 (5A) Logan
Plasmid Box 1 IGM017 Plasmid pSB1T3 backbone with RFP Insert [http://partsregistry.org/Part:BBa_J04450 BBa_J04450] pSB1T3 2012 kit plate 1 (7A) Logan
Plasmid Box 1 IGM021 RFP [http://partsregistry.org/Part:BBa_J06504 BBa_J06504] pSB1A2 2012 kit plate 1 (13F) Incorrect Ben
Plasmid Box 1 IGM022 pAK.TAQ Jared Mike
Plasmid Box 1 IGM023 pET21.KOD Jared Mike
Plasmid Box 1 IGM024 pQL269 Jared Mike
Plasmid Box 1 IGM025 pACYC.T7.GFP Jared Mike
Plasmid Box 1 IGM026 sfGFP pET21 Razan

Strain Database

All strains are in the back right rack of the –80°C freezer.

Box Slot Label Description Strain Source Added by
iGEM 2012 Box 1 2 AG1 Host strain of ASKA collection Barrick Lab
iGEM 2012 Box 1 3 BW25113 Host strain of Keio collection Barrick Lab
iGEM 2012 Box 1 4 cadA AG1 + ASKA collection cadA plasmid, CamR Barrick Lab
iGEM 2012 Box 1 5 ldcC AG1 + ASKA collection ldcC plasmid, CamR Barrick Lab
iGEM 2012 Box 1 6 tnaA Keio collection knockout (version of odor-less E. coli), KanR Barrick Lab
iGEM 2012 Box 1 7 IGM009 crdASC (4864 bp) TOP10 Barrick Lab Ben
iGEM 2012 Box 1 8 IGM010 crdASC (4943 bp) TOP10 Barrick Lab Ben
iGEM 2012 Box 1 9 IGM011 crdASC (4864 bp) BL21(DE3) Barrick Lab Ben
iGEM 2012 Box 1 10 IGM012 crdASC (4943 bp) BL21(DE3) Barrick Lab Ben
iGEM 2012 Box 1 11 IGM013 BBa_K515105: J23100-sfGFP-pSB1C3(CamR) epi300 Parts Kit
iGEM 2012 Box 1 IGM014 pSB1A3 with RFP Bba_J04450 TOP10 Parts Kit
iGEM 2012 Box 1 IGM015 pSB1C3 with RFP Bba_J04450 TOP10 Parts Kit
iGEM 2012 Box 1 IGM016 pSB1K3 with RFP Bba_J04450 TOP10 Parts Kit
iGEM 2012 Box 1 IGM017 pSB1T3 with RFP Bba_J04450 TOP10 Parts Kit
iGEM 2012 Box 1 IGM018 pSB1A2 with LasR Promoter Bba_R0079 TOP10 Parts Kit Razan
iGEM 2012 Box 1 IGM019 pSB2K3 with LasR Bba_C0079 TOP10 Parts Kit Razan
iGEM 2012 Box 1 IGM020 pSB1A2 with Lac Promoter Bba_R0010 TOP10 Parts Kit Razan
iGEM 2012 Box 1 IGM021 J23151_GFP_pSB3K3: Bba_I20270 TOP10 Parts Kit Erik
iGEM 2012 Box 1 IGM022 J23101_GFP_pSB3K3: Bba_I20260 TOP10 Parts Kit Erik
iGEM 2012 Box 1 IGM026 pSB1A2-J06504 (RFP--incorrect sequence) TOP10 Parts Kit Ben

ZombiE.coli parts

Plasmid Part Description Source
pReporter [http://partsregistry.org/Part:BBa_I714891 BBa_I714891] GFP: Green fluorescent protein (fused with SDY... is there a different part we should use?) 2012 kit plate 2 (15L)
pReporter [http://partsregistry.org/Part:BBa_K081014 BBa_K081014] RFP protein generator - PoPS->RFP 2012 kit plate 3 (12O)
pReporter [http://partsregistry.org/Part:BBa_K081009 BBa_K081009] LasI protein generator (TERM-) 2012 kit plate 2 (10N)
pReporter [http://partsregistry.org/Part:BBa_J24679 BBa_J24679] RBS + LacI 2012 kit plate 1 (7L)
pReporter [http://partsregistry.org/Part:BBa_B0015 BBa_B0015] Double terminator (BBa_B0010-BBa_B0012) 2012 kit plate 1 (23L)
pConverter [http://partsregistry.org/Part:BBa_R0079 BBa_R0079] LasR Promoter 2012 kit plate 1 (12A)
pConverter [http://partsregistry.org/Part:BBa_C0079 BBa_C0079] LasR 2012 kit plate 1 (14J)
pConverter [http://partsregistry.org/Part:BBa_K082016 BBa_K082016] LacIM1 Parts Registry
pConverter [http://partsregistry.org/Part:BBa_R0010 BBa_R0010] LacI Promoter 2012 kit plate 1 (1D)
pConverter CRE pQL269 Plasmid