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Team:TU Darmstadt/Labjournal/Simulation
From 2012.igem.org
Simulation
This section of the labjournals features the simulations and modelling part. Due to the time-consuming nature of simulations involving software like Yasara or R (although this creatly depends on the available calculation capacity and the performed tasks) this documentation is split by tasks not time.
In order to characterize and enhance the informations available of the pursued enzymes of interest (for more information take a look at Project 1-3) the following simulations were employed.
- Computation of a gaussian network model (GNM)
- Homology Modeling
