Team:EPF-Lausanne/Notebook/24 August 2012

From 2012.igem.org

(Difference between revisions)
(Created page with "{{:Team:EPF-Lausanne/Template/Header}} {{:Team:EPF-Lausanne/Template/NotebookHeader}} <!-- Content between here --> == Ligation of purified PCR products into backbones == {{:...")
(Ligation of purified PCR products into backbones)
Line 27: Line 27:
; Comments:
; Comments:
Insert comments about what happened.
Insert comments about what happened.
 +
== VP16 Activity check ==
 +
{{:Team:EPF-Lausanne/Template/LabPresence|June}}
 +
I. VP16 sample preparation
 +
1. VP16 has been aliquoted and stocked in -80 degree again. (There are Good and Bad labeled VP16 - Good means it has been preserved in -80 and Bad means it once had been in room  temperature for a while so maybe denatured)
 +
2. Diluted the VP16 sample with 1x TBST solution and made 10microG/microL of VP16 sample.
 +
3. Loaded 5microG / 10microG / 15microG of VP16 for Good and Bad each thus 6 samples.
 +
 +
II. CHO cell mixture with VP16
 +
1. CHO cell has been lysated and mixed with VP16.
 +
2. Made some gradient level of CHO cell concentration - 20 / 30 / 40 microL with Good VP16 sample.
 +
 +
From lane 1 - 10,
 +
 +
1. Ladder = 7 microL
 +
2. 20microL of CHO cell lysis + 1microL of VP16 (10microG) + 29microL of SDS lysis buffer = 50microL total
 +
3. 30microL of CHO cell lysis + 1microL of VP16 (10microG) + 19microL of SDS lysis buffer = 50microL total
 +
4. 40microL of CHO cell lysis + 1microL of VP16 (10microG) + 9microL of SDS lysis buffer = 50microL total
 +
5. 24.5microL of SDS lysis buffer + 0.5microL of VP16 (5microG) = 25microL total (Good)
 +
6. 24microL of SDS lysis buffer + 1microL of VP16 (10microG) = 25microL total (Good)
 +
7. 23.5microL of SDS lysis buffer + 1.5microL of VP16 (15microG) = 25microL total (Good)
 +
8. 24.5microL of SDS lysis buffer + 0.5microL of VP16 (5microG) = 25microL total (Bad)
 +
9. 24microL of SDS lysis buffer + 1microL of VP16 (10microG) = 25microL total (Bad)
 +
10. 23.5microL of SDS lysis buffer + 1.5microL of VP16 (15microG) = 25microL total (Bad)
 +
 +
I stocked this in -4' refrigerator and I will tag antibodies on Monday.
<!-- And here -->
<!-- And here -->
{{:Team:EPF-Lausanne/Template/Footer}}
{{:Team:EPF-Lausanne/Template/Footer}}

Revision as of 17:37, 24 August 2012



Ligation of purified PCR products into backbones

PCR products have been purified the day before.

For Fussenegger:

  • TNFR into pGL
  • eGFP into pGL

SEAP can't be ligated yet! Digestion of pGL with MfeI required!

For LovTAP:

  • Matt's PCR LovTAP into pMP
  • RO into pcDNA3.1+


Protocol: None

Forgot to insert protocol.


Comments

Insert comments about what happened.

VP16 Activity check

I. VP16 sample preparation 1. VP16 has been aliquoted and stocked in -80 degree again. (There are Good and Bad labeled VP16 - Good means it has been preserved in -80 and Bad means it once had been in room temperature for a while so maybe denatured) 2. Diluted the VP16 sample with 1x TBST solution and made 10microG/microL of VP16 sample. 3. Loaded 5microG / 10microG / 15microG of VP16 for Good and Bad each thus 6 samples.

II. CHO cell mixture with VP16 1. CHO cell has been lysated and mixed with VP16. 2. Made some gradient level of CHO cell concentration - 20 / 30 / 40 microL with Good VP16 sample.

From lane 1 - 10,

1. Ladder = 7 microL 2. 20microL of CHO cell lysis + 1microL of VP16 (10microG) + 29microL of SDS lysis buffer = 50microL total 3. 30microL of CHO cell lysis + 1microL of VP16 (10microG) + 19microL of SDS lysis buffer = 50microL total 4. 40microL of CHO cell lysis + 1microL of VP16 (10microG) + 9microL of SDS lysis buffer = 50microL total 5. 24.5microL of SDS lysis buffer + 0.5microL of VP16 (5microG) = 25microL total (Good) 6. 24microL of SDS lysis buffer + 1microL of VP16 (10microG) = 25microL total (Good) 7. 23.5microL of SDS lysis buffer + 1.5microL of VP16 (15microG) = 25microL total (Good) 8. 24.5microL of SDS lysis buffer + 0.5microL of VP16 (5microG) = 25microL total (Bad) 9. 24microL of SDS lysis buffer + 1microL of VP16 (10microG) = 25microL total (Bad) 10. 23.5microL of SDS lysis buffer + 1.5microL of VP16 (15microG) = 25microL total (Bad)

I stocked this in -4' refrigerator and I will tag antibodies on Monday.