Team:St Andrews/Omega-3-synthesis

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   <h1>Omega-3 fatty acid synthesis</h1>
   <h1>Omega-3 fatty acid synthesis</h1>
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<section id="Project Description">
<section id="Project Description">
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<h2>Project Descriptions</h2>
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  <h2>Project Descriptions</h2>
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<p>Omega-3 fatty acids are an essential part of the human diet <a href="#reference3"> (reference) </a>. Human beings, and all larger organisms cannot synthesize ω-3 fatty acids as they lack a Δ15 desaturase to create a double bond at the correct location. Certain microrganisms, such as microalgae and cyanobacteria, do contain this desaturase and can thus directly synthesize ω-3 fatty acids <a href="#reference1"> (Arts et al, 2009)</a>. Their anabolic product can then enter the food chain – algae are eaten by fish, and seafood is the main source of ω-3 for humans <a href="#reference3">(Tonon et al, 2002)</a>. </p>
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      <p>Omega-3 fatty acids are an essential part of the human diet <a href="#reference3"> (reference) </a>. Human beings, and all larger organisms cannot synthesize ω-3 fatty acids as they lack a Δ15 desaturase to create a double bond at the correct location. Certain microrganisms, such as microalgae and cyanobacteria, do contain this desaturase and can thus directly synthesize ω-3 fatty acids <a href="#reference1"> (Arts et al, 2009)</a>. Their anabolic product can then enter the food chain – algae are eaten by fish, and seafood is the main source of ω-3 for humans <a href="#reference3">(Tonon et al, 2002)</a>. </p>
<p>However, overfishing is a serious problem in the world’s oceans already, and the human population is estimated to rise to a up to NUMBER <a href="#reference"> (reference) </a>. Additionally, global warming will cause a further reduction in the availability of ω-3 (Arts et al, 2009):  at higher temperatures, microalgae produce less ω-3 desaturated fatty acids. Desaturated carbon chains cause a lower melting temperature in the membrane, which the microorganism wants to avoid by using more saturated fatty acids in their membranes <a href="#reference2"> (Garwin, Cronan, 1980) </a>. Thus, the combination of declining fish stock and a decrease in overall ω-3 fatty acids is making the continuation of supply for human nutrition a relevant issue. </p>
<p>However, overfishing is a serious problem in the world’s oceans already, and the human population is estimated to rise to a up to NUMBER <a href="#reference"> (reference) </a>. Additionally, global warming will cause a further reduction in the availability of ω-3 (Arts et al, 2009):  at higher temperatures, microalgae produce less ω-3 desaturated fatty acids. Desaturated carbon chains cause a lower melting temperature in the membrane, which the microorganism wants to avoid by using more saturated fatty acids in their membranes <a href="#reference2"> (Garwin, Cronan, 1980) </a>. Thus, the combination of declining fish stock and a decrease in overall ω-3 fatty acids is making the continuation of supply for human nutrition a relevant issue. </p>
<p>Harvesting algae directly is costly and ineffective <a href="#reference3"> (Borowitzka, 1997)</a>, so there is much potential in expressing a metabolic pathway for ω-3 fatty acid synthesis in E. coli, which is cheaper and more accessible. </p>
<p>Harvesting algae directly is costly and ineffective <a href="#reference3"> (Borowitzka, 1997)</a>, so there is much potential in expressing a metabolic pathway for ω-3 fatty acid synthesis in E. coli, which is cheaper and more accessible. </p>
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<b><u>References</u></b>
<b><u>References</u></b>
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1. <a name="reference1">M. Arts, M. Brett, M. Kainz (Eds.), Lipids in Aquatic Ecosystems. Springer: 2009.</a>
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<p><a name="reference1">M. Arts, M. Brett, M. Kainz (Eds.), Lipids in Aquatic Ecosystems. Springer: 2009.</a></p>
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2. <a name="reference2">J. L. Garwin, J. E. Cronan Jr, Thermal modulation of fatty acid synthesis in Escherichia coli does not involve de novo enzyme synthesis. J Bacteriol. 1980 March; 141(3): 1457–1459. </a>
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<p><a name="reference2">J. L. Garwin, J. E. Cronan Jr, Thermal modulation of fatty acid synthesis in Escherichia coli does not involve de novo enzyme synthesis. J Bacteriol. 1980 March; 141(3): 1457–1459. </a></p>
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3. <a name="reference3">T. Tonon, D. Harvey, T. Larson, I. Graham,   a href="http://www.sciencedirect.com/science/article/pii/S0031942202002017" Long chain polyunsaturated fatty acid production and partitioning to triacylglycerols in four microalgae.</u> </a>Phytochemistry, Volume 61, Issue 1, September 2002, Pages 15-24, ISSN 0031-9422, 10.1016/S0031-9422(02)00201-7. </a>
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<p><a name="reference3">T. Tonon, D. Harvey, T. Larson, I. Graham, <a href="http://www.sciencedirect.com/science/article/pii/S0031942202002017"><u><color=blue>Long chain polyunsaturated fatty acid production and partitioning to triacylglycerols in four microalgae.</color></u></a>Phytochemistry, Volume 61, Issue 1, September 2002, Pages 15-24, ISSN 0031-9422, 10.1016/S0031-9422(02)00201-7. </a></p>
<section id="Synthesizing the pathway">
<section id="Synthesizing the pathway">

Revision as of 13:50, 9 July 2012

Omega-3 fatty acid synthesis


Project Descriptions

Omega-3 fatty acids are an essential part of the human diet (reference) . Human beings, and all larger organisms cannot synthesize ω-3 fatty acids as they lack a Δ15 desaturase to create a double bond at the correct location. Certain microrganisms, such as microalgae and cyanobacteria, do contain this desaturase and can thus directly synthesize ω-3 fatty acids (Arts et al, 2009). Their anabolic product can then enter the food chain – algae are eaten by fish, and seafood is the main source of ω-3 for humans (Tonon et al, 2002).

However, overfishing is a serious problem in the world’s oceans already, and the human population is estimated to rise to a up to NUMBER (reference) . Additionally, global warming will cause a further reduction in the availability of ω-3 (Arts et al, 2009): at higher temperatures, microalgae produce less ω-3 desaturated fatty acids. Desaturated carbon chains cause a lower melting temperature in the membrane, which the microorganism wants to avoid by using more saturated fatty acids in their membranes (Garwin, Cronan, 1980) . Thus, the combination of declining fish stock and a decrease in overall ω-3 fatty acids is making the continuation of supply for human nutrition a relevant issue.

Harvesting algae directly is costly and ineffective (Borowitzka, 1997), so there is much potential in expressing a metabolic pathway for ω-3 fatty acid synthesis in E. coli, which is cheaper and more accessible.

References

M. Arts, M. Brett, M. Kainz (Eds.), Lipids in Aquatic Ecosystems. Springer: 2009.

J. L. Garwin, J. E. Cronan Jr, Thermal modulation of fatty acid synthesis in Escherichia coli does not involve de novo enzyme synthesis. J Bacteriol. 1980 March; 141(3): 1457–1459.

T. Tonon, D. Harvey, T. Larson, I. Graham, Long chain polyunsaturated fatty acid production and partitioning to triacylglycerols in four microalgae.Phytochemistry, Volume 61, Issue 1, September 2002, Pages 15-24, ISSN 0031-9422, 10.1016/S0031-9422(02)00201-7.


Synthesizing the pathway


Biobricks