From 2012.igem.org

Revision as of 09:23, 5 June 2012

• Home
• Team
  • The Team
  • Team Registration
• Project
  • 1. Introduction
  • 2. PnA System
  • 3. Virus-Like Particles
    • CCMV
    • HepB
    • Polerovirus Natural BioBrick
  • 4. Outside Modification
  • 5. Inside Modification
  • 6. Detection of VLPs
  • 7. Applications
  • 8. The Constructor
  • 9. Final Overview
• Human Practices
  • Human Practices Home
  • 1. Mini Symposium
  • 2. Visiting Secondary Schools
  • 3. Discovery Festival
    • Communication Science
  • 4. Stakeholders
  • 5. Munich CAS Conference
• Safety
  • Introduction
  • 1. General safety
  • 2. Virus-related safety
  • 3. Regulations
  • 4. Safety suggestions
  • 5. Safety of applications
• Modeling
  • Human Body Model
  • Tertiary folding prediction
  • VLP assembly model
• Attributions
• Parts
• Notebook
  • Journal
  • Protocols

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Last year's project: Synchronized Oscillatory System

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week 5: 4 june - 8 june

office work

Wiki page

Monday:

• Update notebook and protocols
• Start to make master-plan for wiki page
• Developing the wiki template further

This monday we've worked further on updating the wiki, we are now on schedule with the notebook and protocols. We also made a master plan on how the wiki should look like. The first steps are being made to create a prize winning wiki page.

Tuesday:

• Update notebook and protocols
• Develop master-plan further

[Meeting]

written by: Mark

lab work

CCMV Bricking:

Monday:

• Check agar plates for colonies
• Grow colonies in LB medium + kanamycin, checked optical density

1. CCMV-1
2. CCMV-2
3. d26-CCMV-1
4. d26-CCMV-2
5. d26-CCMV-3

• overnight in shaker 37 degree Celcius

The monday morning of this week started with a bit of a shock: our plates with our transformed E.coli we're almost completely empty. Luckely there was at least one colony on both of the plates with transformed E.coli containing bricks. We put them in Greiner tubes with LB-medium and a antibiotic and after a few hours checked their optical density. In the afternoon we prepared the samples for a PCR to validate the bricks.

CCMV test protocol:

Monday:

• Followed dialysis protocol
• Change: instead of sonicator for cell lysis, French press was used

We've also made two samples of wt CCMV VLP ready for dialysis. There is only one modification applied in the protocol, instead of using the horrible sonicator, we used the French press, which is a great apparatus and easy to use. In the late afternoon we started with the dialysis.

written by: Mark