Team:Uppsala University/Notebook

From 2012.igem.org

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<li>BBa_K157000 - BBa_K243000 (Fok_a)</li>
<li>BBa_K157000 - BBa_K243000 (Fok_a)</li>
<li>BBa_K157000 - BBa_K243001 (Fok_i)</li>
<li>BBa_K157000 - BBa_K243001 (Fok_i)</li>
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<b>Participant:</b> Karl, Sabri, Pikkei<br>
<b>Participant:</b> Karl, Sabri, Pikkei<br>

Revision as of 19:03, 31 July 2012

Team Uppsala University – iGEM 2012


This page is currently under construction.

Tuesday 26 June
Participant: Pikkei
Experiment: Re-streak from agar stabs
  • pSB1C3 - BBa_K322922 (cat + sacB)
  • pSB1C3 - BBa_K322921 (sacB)
    		•
  • BBa_K157000 - BBa_K243000 (Fok_a)
  • BBa_K157000 - BBa_K243001 (Fok_i)

    • Participant: Karl, Sabri, Pikkei
    Experiment: Take up from kit and transform
  • pSB1A2 - Plac (BBa_R0010) from plate 1, well 1D
  • pSB2K3 - pBAD (BBa_I50500) from plate 1, well 14N
    		•
  • pSB1A2 - PlacQ (BBa_K091111) from plate 5, well 12C
    		•
    Participant: Emy, Caroline
    Experiment: Start o/n culture
  • pSB1C3 - tetA
  • pSB1C3 - CTX-M-15
  • pSB1C3 - ACC(6')_lb_cr
  • pSB1C3 - SYFP2
  • pSB1C3 - red
  • pSB3C5 - red
  • pSB3T5 - red
  • pSB1A3 - red
  • pSB4A5 - red
  • pSB1A2 - red
  • pSB1K3 - J23101
  • pSB1K3 - red
  • pSB3K3 - red
  • MG1655 pSB4K1 -lacIs (N246Q)
    		•

    Wednesday 26 June
    Participant: Pikkei
    Experiment: Colony PCR and o/n culture
  • 18. pSB1C3 – cat-sacB
  • 19. pSB1C3 - sacB
  • 20. BBa_K157000 – Fok_a
  • 21. BBa_K157000 – Fok_i
    • Screened two clones of each
    Left in PCR-machine o/n     		Participant: Sabri, Fredrik
    Experiment: Re-streak
  • 15. pSB1A2 - Plac
  • 17. pSB1A2 - PlacQ
    		•
    Participant: Sibel, Lisa, Sabri, Olle, Hampus, Caroline, Emy, Joakim, Joel, Anna, Anders
    Experiment: Plasmid Prep and Glycerol Stock
  • 4. pSB1A3 - red
  • 5. pSB4A5 - red
  • 12. pSB1A2 - B0034
  • 13. pSB1K3 - J23101
  • 14. MG1655 - pSB4K1 - lacI (N246Q)
  • pSB1C3 - CTX-M-15
  • pSB1C3 - ACC(6')_lb_cr
  • pSB1C3 - SYFP2
  • pSB1K3 - red
  • pSB3K3 - red
  • pSB1C3 - tetA
  • 1. pSB1C3 - red
  • 2. pSB3C5 - red
  • 3. pSB3T5 - red
    • Followed Plasmid Purification Protocol     		Participant: Hampus, Sabri
    Experiment: Cloning of 22. pEL3S15 - red and 13. pSB1K3 - J23101
  • 30. pEL3S15 - J23101
    • Cut with X and P

    Participant: Caroline, Emy, Ellen, Joel
    Experiment: Assembly
    pSB3T5 - lacIs - TλT1
    pSB3T5 - SYFP2 - TλT1
    pSB3T5 - T5lac - B0034
    Followed BioBrick Assembly Manual


    Thursday 28 June

    Participant: Joel
    Experiment: Gel Electrophoresis of yesterday's screening products
    18.1-2 pSB1C3 – cat-sacB
    19.1-2 pSB1C3 - sacB
    20.1-2 BBa_K157000 – Fok_a
    21.1-2 BBa_K157000 – Fok_i
    Result: None of the band were correct

    Participant: Caroline, Emy, Ellen, Joel
    Experiment: Transformation
    pSB3T5 - lacIs - TλT1
    pSB3T5 - SYFP2 - TλT1
    pSB3T5 - T5lac - B0034
    Followed TOP10 transformation protocol

    Participant: Fredrik, Julia, Joakim K, Olle
    Experiment: Plasmid Prep and Glycerol Stock
    18.1-2 pSB1C3 – cat-sacB
    19.1-2 pSB1C3 - sacB
    20.1-2 BBa_K157000 – Fok_a
    21.1-2 BBa_K157000 – Fok_i
    Followed Plasmid Purification Protocol

    Participant: Lisa, Sabri
    Experiment: o/n culture
    .1-2 pSB1A2 - Plac
    .1-2 pSB1A2 - PlacQ

    Participant: Joakim, Anna
    Experiment: Make new SOB & SOC

    Participant: Tobias, Christoffer
    Experiment: Transformation
    pEL3S15 - J23101


    Friday 29 June

    Participant: Julia, Hampus, Tobias
    Experiment: Re-streak
    pEL3S15 - J23101

    Participant: Olle, Sabri, Lisa
    Experiment: Transformation
    23. pSB1A1 - P1004 (cat) from registry well 7B
    24. pSB2K3 - tetR from registry well 16P

    Participant: Sabri, Lisa, Josefin, Niklas
    Experiment: Assembly
    pSB1K3 - B0034 - SYFP2
    pSB3C5 - J23101 - tet inv

    Participant: Caroline, Emy, Ellen, Joel, Tobias
    Experiment: Assembly
    pSB3T5 - PlacQ - ACC(6')
    pSB3T5 - PlacQ - CTX-M-15
    pSB3T5 - PlacQ - tetA
    pSB3K3 - Plac - B0034 - SYFP2
    pSB1C3 - TλT1

    Participant: Caroline, Emy, Ellen, Joel, Tobias
    Experiment: Re-streak
    pSB3T5 - lacIs - TλT1
    pSB3T5 - SYFP2 - TλT1
    pSB3T5 - T5lac - B0034

    Participant: Anna, Ellen
    Experiment: o/n culture
    J23116

    Participant: Anna, Ellen
    Experiment: Plasmid Prep
    15.1-2 pSB1A2 - Plac
    17.1-2 pSB1A2 - PlacQ


    Saturday 30 June

    Participant: Hampus, Julia, Tobias
    Experiment: Screening
    pEL3S15 - J23101
    pSB3T5 - lacIs -
    pSB3T5 - SYFP2 -
    pSB3T5 - pT5lac - B0034
    Result: Bad gel


    Participant: Caroline, Fredrik, Emy, Hampus
    Experiment: o/n culture
    30.1-4 pEL3S15 - J23101
    31.1-4 pEL3T5 - lacIs -
    32.1-4 pSB3T5 - SYFP2 -
    33.1-2 pSB3T5- pT5lac - B0034
    20.1 BBa_K157000 - Fok_a
    21.1 BBa_K157000 - Fok_i

    Participant: Ellen, Emy, Caroline, Joel
    Experiment: Plasmid Prep
    J61002 - J23106
    J61002 - J23116

    Participant: Ellen, Emy, Caroline, Joel
    Experiment: Transformation
    pSB3T5 - PlacIq - AAC(6')
    pSB3T5 - PlacIq - CTX-M
    pSB3T5 - PlacIq - tetA
    pSB3K3 - Plac - B0034 - SYFP2
    pSB1C3 - T....

    Participant: Ellen, Emy, Caroline, Joel
    Experiment: Assembly
    pSB3T5 - J23106 - AAC(6')
    pSB3T5 - J23106 - CTX-M
    pSB3T5 - J23106 - tetA
    pSB3T5 - J23116 - AAC(6')
    pSB3T5 - J23116 - CTX-M
    pSB3T5 - J23116 - tetA

    Participant: Fredrik
    Experiment: Transformation
    24. pSB2K3 - tet inv
    39. pSB1K3 - B0034 - SYFP2
    40. pSB3C5 - J23101 - tet inv

    Participant: Fredrik
    Experiment: Re-streak
    16. pSB2K3 - pBAD
    23. pSB1A1 - P1004
    24. pSB1K3 - tet inv


    Sunday 1 July

    Participant: Hampus, Julia, Lisa
    Experiment: Ran new gel of yesterday's screening
    pEL3S15 - J23101
    pSB3T5 - lacIs -
    pSB3T5 - SYFP2 -
    pSB3T5 - pT5lac - B0034
    Result: Contamination

    Participant: Caroline, Emy
    Experiment: Transformation
    pSB3T5 - J23106 - AAC(6')
    pSB3T5 - J23106 - CTX-M
    pSB3T5 - J23106 - tetA
    pSB3T5 - J23116 - AAC(6')
    pSB3T5 - J23116 - CTX-M
    pSB3T5 - J23116 - tetA

    Participant: Caroline, Emy
    Experiment: Re-streak
    pSB3T5 - PlacIq - AAC(6')
    pSB3T5 - PlacIq - CTX-M
    pSB3T5 - PlacIq - tetA
    pSB3K3 - Plac - B0034 - SYFP2
    pSB1C3 - T....

    Participant: Emy, Caroline, Joel
    Experiment: o/n culture
    31.1-4 pSB3T5 - lacIs - T...
    32.1-4 pSB3T5 - SYFP2 - T...
    33.1-2 pSB3T5 - pT5lac - B0034
    24.1-4 pSB1K3 - tet inv
    30.1-4 pEL3S15 - J23101
    20.1 BBa_K157000 - Fok_a
    21.2 BBa_K157000 - Fok_i
    23.1-4 pSB1A1 - P1004 (BBa_P1004)
    44. pEL3C15 (FRT) - Red
    45. pEL3C15 - Red
    46. pEL3A15 - Red
    47. pEL3A15 (FRT) - Red
    48. pEL3S15 (FRT) - Red
    49. pEL3S15 - Red
    50. pEL3K15 (FRT) - Red
    51. pEL3K15 - Red

    Participant: Joel
    Experiment: Transformation from kit
    41. pSB2K3 - Pcat (BBa_I14033) from plate 1, well 18P
    42. pSB2K3 - pBAD (BBa_I14018) from plate 1, well 18N
    43. pSB2K3 - Pcat (BBa_I14031) from plate 2, well 13B

    Prepared TOP10 competent cells
    Prepared LB medium, TEB medium and selective agarplates

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