"
Team:Evry/Auxin diffusion
From 2012.igem.org
(Difference between revisions)
| Line 35: | Line 35: | ||
<p id="references">References:</p> | <p id="references">References:</p> | ||
<ol> | <ol> | ||
| - | <li></li> | + | <li><i>Atlas of xenopus development</i>,G. Bernardini, Springer, 1999.</li> |
</ol> | </ol> | ||
</div> | </div> | ||
Revision as of 14:23, 17 September 2012
Model using Partial Differential Equations(PDE)
Overview
Using PDE instead of ODE allows one to take into account the space dimensions. Where in the ODE model, the concentration of auxin in a compartment was considered homogeneous, here we can represent the variations internal to the compartment. When taking into account the space dimensions, new problems arise: finding a coherent geometry, 2D vs 3D model, precision, etc. We chose to model a slice of a tadpole's tail based on images from [ADD BOOK REF]. Putting multiple such slices one after the other allows us to approximate a 3 dimensions model.
Hypothesis
There are the different hypothesis we were constrained to make in order to model the system:
- The quantity of auxins is homogeneous in the blood
Model description
Equations
Geometry
Limit conditions
Calibration
Results
Conclusion
References
References:
- Atlas of xenopus development,G. Bernardini, Springer, 1999.
References:
- Atlas of xenopus development,G. Bernardini, Springer, 1999.
