Team:Austin Texas/Team

From 2012.igem.org

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<li class="home"><a href="/Team:Austin_Texas" title="home"><span class="displace">Home</span></a></li>
<li class="home"><a href="/Team:Austin_Texas" title="home"><span class="displace">Home</span></a></li>
<li class="team"><a href="/Team:Austin_Texas/Team" class="selected" title="team"><span class="displace">Team</span></a></li>
<li class="team"><a href="/Team:Austin_Texas/Team" class="selected" title="team"><span class="displace">Team</span></a></li>
<li class="official_team_profile"><a href="https://igem.org/Team.cgi?year=2012&team_name=Austin_Texas" title="official_team_profile"><span class="displace">Official Team Profile</span></a></li>
<li class="official_team_profile"><a href="https://igem.org/Team.cgi?year=2012&team_name=Austin_Texas" title="official_team_profile"><span class="displace">Official Team Profile</span></a></li>
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<li class="project"><a href="/Team:Austin_Texas/Project" title="project"><span class="displace">Project</span></a></li>
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<li class="human_practices"><a href="/Team:Austin_Texas/ZombiE_coli#Human_Practices" title="Human Practices"><span class="displace">Human Practices</span></a></li>
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<li class="parts_submitted"><a href="/Team:Austin_Texas/Parts" title="parts_submitted"><span class="displace">Parts Submitted</span></a></li>
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<li class="Caffeinated_coli"><a href="/Team:Austin_Texas/Caffeinated_coli" title="Caffeinated_coli"><span class="displace">Caffeinated coli</span></a></li>
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<li class="modelling"><a href="/Team:Austin_Texas/Modeling" title="modeling"><span class="displace">Modeling</span></a></li>
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<li class="ZombiE_coli"><a href="/Team:Austin_Texas/ZombiE_coli" title="ZombiE_coli"><span class="displace">ZombiE.coli</span></a></li>
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<li class="Spinach_reporter"><a href="/Team:Austin_Texas/Spinach_reporter" title="Spinach_reporter"><span class="displace">Spinach reporter</span></a></li>
<li class="notebook"><a href="/Team:Austin_Texas/Notebook" title="notebook"><span class="displace">Notebook</span></a></li>
<li class="notebook"><a href="/Team:Austin_Texas/Notebook" title="notebook"><span class="displace">Notebook</span></a></li>
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<li class="parts_submitted"><a href="/Team:Austin_Texas/Parts" title="parts_submitted"><span class="displace">Parts Submitted</span></a></li>
<li class="safety"><a href="/Team:Austin_Texas/Safety" title="safety"><span class="displace">Safety</span></a></li>
<li class="safety"><a href="/Team:Austin_Texas/Safety" title="safety"><span class="displace">Safety</span></a></li>
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<li class="attributions"><a href="/Team:Austin_Texas/Attributions" title="attributions"><span class="displace">Attributions</span></a></li>
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<li class="attributions"><a href="/Team:Austin_Texas/Team#Attributions" title="attributions"><span class="displace">Attributions</span></a></li>
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<img src="https://static.igem.org/mediawiki/2012/1/16/University_of_texas_logo.jpg" alt="University of Texas at Austin logo" class="ut_logo" />
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= '''Team University of Texas at Austin''' =
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|You can write a background of your team here.  Give us a background of your team, the members, etc.  Or tell us more about something of your choosing.
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|[[Image:Austin_Texas_UT_logo.png|200px|right|frame]]
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|[[Image:Austin_Texas_team.png|right|frame|Your team picture]]
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|align="center"|[[Team:Austin_Texas | Team Austin_Texas]]
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[[Image:Austin_Texas_Team_Zombie.png|center]]
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The University of Texas is the flagship public university of the UT system and resides in Austin, Texas. It's a fun place to live and a great place to do science.
== '''Who we are''' ==
== '''Who we are''' ==
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'''Advisor:'''
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*'''Peter Otoupal'''
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Image:Austin_Texas_Team_member_1.png|Team member 1
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Image:jeffrey_barrick.jpg|Jeff Barrick; Assistant Professor of Chemistry and Biochemistry
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Image:Austin_Texas_Team_member_2.png|Team member 2
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Image:Jared.jpg|Jared Ellefson; Man with the Plan and part time Blues Brother
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Image:Austin_Texas_Team_member_3.png|Team member 3
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Image:Michael hammerling.jpg|Michael Hammerling; second year Graduate student in Cell and Molecular Biology
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Image:Austin_Texas_Team_member_4.png|Team member 4
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Image:Erik_quandt.jpg|Erik Quandt; Graduate student in Cell and Molecular Biology
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Image:Austin_Texas_Team_member_5.png|Team member 5
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Image:Razan.jpg|Razan Alnahhas: third year undergraduate studying human biology
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Image:Austin_Texas_Team_member_6.png|Team member 6
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Image:Logan_Bachman.jpg|Logan Bachman; third year undergraduate biochemistry major, also awesome
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Image:Austin_Texas_Team_member_7.png|Team member 7
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Image:Will_Darden.png|Will Darden: third year undergraduate studying Computational Biology
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Image:Austin_Texas_Team_member_8.png|Team member 8
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Image:Aurko_pretending_to_be_a_scientist.jpg|Aurko Dasgupta: fourth year Cell and Molecular Biology student
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Image:Peter_Otoupal_Doing_Science_Stuff.jpg|Peter Otoupal
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Image:Peter_Otoupal_Doing_Science_Stuff.jpg|Peter Otoupal ; fourth year Chemical Engineering undergraduate, with a penchant for debauchery
Image:Austin_Texas_Team_member_Ben_Slater.jpg|Ben Slater: Undergrad in junior year; studying cellular and molecular biology
Image:Austin_Texas_Team_member_Ben_Slater.jpg|Ben Slater: Undergrad in junior year; studying cellular and molecular biology
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== '''What we did''' ==
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== '''Attributions''' ==
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(Provide proper attribution for all work)
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=== Advisors ===
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* '''Prof. Jeff Barrick''' - faculty sponsor. A little graphic design for the website and coordinated getting ''Pseudomonas'' strain for Caffeinated coli. Found numbers to do calculation of number of guanines in ''E. coli''.
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* '''Jared Ellefson''' - Main ZombiE.coli project advisor.
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* '''Michael Hammerling''' - Main Spinach-mCherry dual reporter project advisor. Advised students on lab work for ZombiE.coli and Caffeinated coli.
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* '''Erik Quandt''' - Main caffeinated coli project advisor.
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=== Team ===
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* '''Razan Alnahhas''' -Constructed and tested pConverter.
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* '''Logan Bachman''' - Constructed and tested Spinach and Spinach-mCherry reporters.
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* '''Will Darden''' - Performed simulations of ZombiE.coli. Analysis of whole-genome shotgun sequencing of ''Pseudomonas putida CBB5''.
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* '''Aurko Dasgupta''' - Human practices, safety officer.
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* '''Peter Otoupal''' - Assayed Caffeinated Coli constructs built by Ben. Performed caffeinated beverage and caffeine growth tests for decaffeination operon.
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* '''Ben Slater''' - Constructed and tested pReporter and pReporter.permaflipped. Designed website's CSS stylesheet, navbar, and header. Assisted Peter and Erik with Caffeinated coli assays and construction.
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=== Others ===
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* [http://www.engineering.uiowa.edu/cbe/faculty-staff/mani-v-subramanian Prof. Mani Subramanian and Ryan Summers of the University of Iowa] for generously sharing the ''Pseudomonas putida'' CBB5 strain with us.
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* [http://openwetware.org/wiki/User:Xi_Che Xi Chen of the Ellington Lab] for the original pET plasmid containing the spinach aptamer.
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* [http://openwetware.org/wiki/CH391L/S12 Colleagues in the Spring 2012 CH 391L Synthetic Biology class] at UT Austin for ideas and research that inspired these projects.
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== '''Where we're from''' ==
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Latest revision as of 03:50, 4 October 2012

Contents

Team University of Texas at Austin

Austin Texas Team Normal.png
Austin Texas Team Zombie.png


The University of Texas is the flagship public university of the UT system and resides in Austin, Texas. It's a fun place to live and a great place to do science.

Who we are


Advisor:

  • Prof. Jeff Barrick


Grad students:

  • Jared Ellefson
  • Michael Hammerling
  • Erik Quandt


Undergrads:

  • Razan Alnahhas
  • Logan Bachman
  • Will Darden
  • Aurko Dasgupta
  • Peter Otoupal
  • Ben Slater

Jeff Barrick; Assistant Professor of Chemistry and Biochemistry

Jared Ellefson; Man with the Plan and part time Blues Brother

Michael Hammerling; second year Graduate student in Cell and Molecular Biology

Erik Quandt; Graduate student in Cell and Molecular Biology

Razan Alnahhas: third year undergraduate studying human biology

Logan Bachman; third year undergraduate biochemistry major, also awesome

Will Darden: third year undergraduate studying Computational Biology

Aurko Dasgupta: fourth year Cell and Molecular Biology student

Peter Otoupal ; fourth year Chemical Engineering undergraduate, with a penchant for debauchery

Ben Slater: Undergrad in junior year; studying cellular and molecular biology

Attributions

Advisors

  • Prof. Jeff Barrick - faculty sponsor. A little graphic design for the website and coordinated getting Pseudomonas strain for Caffeinated coli. Found numbers to do calculation of number of guanines in E. coli.
  • Jared Ellefson - Main ZombiE.coli project advisor.
  • Michael Hammerling - Main Spinach-mCherry dual reporter project advisor. Advised students on lab work for ZombiE.coli and Caffeinated coli.
  • Erik Quandt - Main caffeinated coli project advisor.

Team

  • Razan Alnahhas -Constructed and tested pConverter.
  • Logan Bachman - Constructed and tested Spinach and Spinach-mCherry reporters.
  • Will Darden - Performed simulations of ZombiE.coli. Analysis of whole-genome shotgun sequencing of Pseudomonas putida CBB5.
  • Aurko Dasgupta - Human practices, safety officer.
  • Peter Otoupal - Assayed Caffeinated Coli constructs built by Ben. Performed caffeinated beverage and caffeine growth tests for decaffeination operon.
  • Ben Slater - Constructed and tested pReporter and pReporter.permaflipped. Designed website's CSS stylesheet, navbar, and header. Assisted Peter and Erik with Caffeinated coli assays and construction.

Others

  • [http://www.engineering.uiowa.edu/cbe/faculty-staff/mani-v-subramanian Prof. Mani Subramanian and Ryan Summers of the University of Iowa] for generously sharing the Pseudomonas putida CBB5 strain with us.
  • [http://openwetware.org/wiki/User:Xi_Che Xi Chen of the Ellington Lab] for the original pET plasmid containing the spinach aptamer.
  • [http://openwetware.org/wiki/CH391L/S12 Colleagues in the Spring 2012 CH 391L Synthetic Biology class] at UT Austin for ideas and research that inspired these projects.