"
Team:Evry/Notebook/w12
From 2012.igem.org
(Difference between revisions)
| (3 intermediate revisions not shown) | |||
| Line 5: | Line 5: | ||
| - | + | ||
<h2>Monday 27th</h2> | <h2>Monday 27th</h2> | ||
| - | Preparation of different cloning: | + | Preparation of different cloning: <br> |
| - | * Amplification of IAAH and IAAM with new primers | + | * Amplification of IAAH and IAAM with new primers <br> |
| - | * Amplification of citrine, sfGFP and mCFP with kozac sequence | + | * Amplification of citrine, sfGFP and mCFP with kozac sequence <br> |
| - | * Digestion of GFP-AID, BOO34 GB, E1010 GB, R0010 GB, B0015 GB, GB insert in EcoRI PstI | + | * Digestion of GFP-AID, BOO34 GB, E1010 GB, R0010 GB, B0015 GB, GB insert in EcoRI PstI <br> |
New cloning attempt of IAAH and IAAM in pSC2+ | New cloning attempt of IAAH and IAAM in pSC2+ | ||
| Line 18: | Line 18: | ||
<h2>Tuesday 28th</h2> | <h2>Tuesday 28th</h2> | ||
| - | *Preparation of digested pSB1C3 in high quantity. Digestion of pSC2+ | + | *Preparation of digested pSB1C3 in high quantity. Digestion of pSC2+ <br> |
| - | *Digestion of the IAAH-IAAM, citrine, sfGFP, mCFP | + | *Digestion of the IAAH-IAAM, citrine, sfGFP, mCFP <br> |
| - | Ligation of all the parts digested the day before and the day. Transformation using the new electrocompetent cell protocol. Concentration before plating and incubation overnight. | + | Ligation of all the parts digested the day before and the day. Transformation using the new electrocompetent cell protocol. Concentration before plating and incubation overnight. <br> |
| - | Ligation of TirI using the in-fusion protocol and electroporation | + | Ligation of TirI using the in-fusion protocol and electroporation <br> |
| - | New transformation of pSB1C3 from plates | + | New transformation of pSB1C3 from plates <br> |
| - | New culture of pSC2+ BB for midi-prep the day after | + | New culture of pSC2+ BB for midi-prep the day after <br> |
<h2>Wednesday 29th</h2> | <h2>Wednesday 29th</h2> | ||
| - | All the plates contained cloned. The color of the GB inset indicates that the insertion might have been efficient for most of the clonings. | + | All the plates contained cloned. The color of the GB inset indicates that the insertion might have been efficient for most of the clonings. <br> |
Colony PCR of 8 clones of each constructs carried out. | Colony PCR of 8 clones of each constructs carried out. | ||
<table> | <table> | ||
| - | <tr><td>GFP-AID</td><td>pSC2+</td><td>clones XXXXX</td></ | + | <tr><td>GFP-AID</td><td>pSC2+</td><td>clones XXXXX</td></tr> |
<tr><td>citrine</td><td>pSC2+</td><td>clones XXXXX</td></tr> | <tr><td>citrine</td><td>pSC2+</td><td>clones XXXXX</td></tr> | ||
</table> | </table> | ||
| + | |||
<td><tr>GG insert</tr><tr>pSC2+</tr><tr>clones XXXXX</tr></td> | <td><tr>GG insert</tr><tr>pSC2+</tr><tr>clones XXXXX</tr></td> | ||
<td><tr>sfGFP</tr><tr>pSC2+</tr><tr>clones XXXXX</tr></td> | <td><tr>sfGFP</tr><tr>pSC2+</tr><tr>clones XXXXX</tr></td> | ||
| Line 49: | Line 50: | ||
<td><tr>GFP-AID</tr><tr>pSB1C3</tr><tr>clones XXXXX</tr></td> | <td><tr>GFP-AID</tr><tr>pSB1C3</tr><tr>clones XXXXX</tr></td> | ||
<td><tr>TirI</tr><tr>pSB1C3</tr><tr>clones XXXXX</tr></td> | <td><tr>TirI</tr><tr>pSB1C3</tr><tr>clones XXXXX</tr></td> | ||
| - | </ | + | |
| + | |||
| + | </html> | ||
Latest revision as of 11:45, 1 September 2012
Weeks:
| June | July | August | September | October | November | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Week 12: 27th August - 2nd September
Monday 27th
Preparation of different cloning:* Amplification of IAAH and IAAM with new primers
* Amplification of citrine, sfGFP and mCFP with kozac sequence
* Digestion of GFP-AID, BOO34 GB, E1010 GB, R0010 GB, B0015 GB, GB insert in EcoRI PstI
New cloning attempt of IAAH and IAAM in pSC2+
Tuesday 28th
*Preparation of digested pSB1C3 in high quantity. Digestion of pSC2+*Digestion of the IAAH-IAAM, citrine, sfGFP, mCFP
Ligation of all the parts digested the day before and the day. Transformation using the new electrocompetent cell protocol. Concentration before plating and incubation overnight.
Ligation of TirI using the in-fusion protocol and electroporation
New transformation of pSB1C3 from plates
New culture of pSC2+ BB for midi-prep the day after
Wednesday 29th
All the plates contained cloned. The color of the GB inset indicates that the insertion might have been efficient for most of the clonings.Colony PCR of 8 clones of each constructs carried out.
| GFP-AID | pSC2+ | clones XXXXX |
| citrine | pSC2+ | clones XXXXX |
