Team:CBNU-Korea/Team

From 2012.igem.org

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{{Team:CBNU-Korea/css_new}}
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<html>
<head>
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/******/
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.TEAM {
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header,footer,section,article,aside,nav,hgroup,details,menu,figure,figcaption
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#CB_top_CBNU_logo {
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background: url(https://static.igem.org/mediawiki/2012/2/2c/CBK_logo_003.png)
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#CB_top_CBNU_logo_text_2 p {
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border-bottom-color: white !important;
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#CB_sub_title h3 {
 
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#CB_sub_menu li {
 
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#li_sub {
 
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.MGD a {
 
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#CB_sub_main {
 
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padding-top: 10px;
 
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#CB_sub_main h1 {
 
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#CB_sub_main h2 {
 
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#CB_sub_main h3 {
 
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#CB_sub_main p {
 
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}
}
#CB_sub_img {
#CB_sub_img {
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background-image:
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url(https://static.igem.org/mediawiki/2012/3/3e/CBK_sub_img_007.png);
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-
 
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+
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/* ----------------CB_footer---------------- */
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#CB_footer {
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-
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-
 
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#CB_footer_logo {
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-
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-
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#CB_footer_text {
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-
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}
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/* ----------------Content---------------- */
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#content {
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background: transparent;
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padding: 0;
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width: 100%;
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border: 0px;
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}
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-
 
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a {
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color: #0088cc;
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}
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a:hover {
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p {
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}
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hr {
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color: transparent;
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background-color: transparent;
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background-image: -webkit-linear-gradient(left, transparent, rgba(0, 0, 0, 0.25),
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-
transparent );
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-
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-
transparent );
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-
}
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-
 
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-
/* ----------------responsive---------------- */
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-
 
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-
/* iPhone, etc portrait ---- */
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@media all and (min-width : 320px) and (max-width : 768px) {
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#menubar {
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-
display: none;
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-
}
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-
#CB_top {
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-
padding-bottom: 0px;
+
-
}
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-
#CB_top_logo_cont {
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-
width: 100%;
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-
max-width: 1080px;
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-
margin: 0 auto;
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-
line-height: 1em;
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-
}
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-
#CB_top_CBNU_logo {
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-
width: 100%;
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margin: 0 auto;
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color: white;
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font-size: 30px;
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-
padding-top: 15px;
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text-align: center;
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-
}
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-
#CB_top_CBNU_logo_img {
+
-
background: url(https://static.igem.org/mediawiki/2012/2/2c/CBK_logo_003.png)
+
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no-repeat;
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width: 120px;
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height: 120px;
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margin: 0 auto;
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-
float: none;
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-
}
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-
#CB_top_MENU {
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-
width: 100%;
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-
text-align: center;
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-
padding-top: 40px;
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-
}
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#CB_top_MENU ul {
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-
margin: 0;
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padding: 0;
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font-size: 12px;
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padding-bottom: 10px;
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-
}
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#CB_top_MENU li {
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-
display: inline-block;
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-
*display: inline;
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-
border-bottom: 5px solid #221B1B;
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-
height: 20px;
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padding: 0 15px;
+
-
margin: 0 4px;
+
-
}
+
-
#CB_top_MENU li:hover {
+
-
background: white;
+
-
border-bottom: 5px solid white;
+
-
}
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-
#CB_top_MENU li:hover a {
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-
color: #24BED3;
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-
}
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-
#CB_top_MENU a {
+
-
color: #0E0B0B;
+
-
}
+
-
}
+
-
 
+
-
/* iPad, tablets etc portrait ---- */
+
-
@media all and (min-width : 769px) and (max-width : 1024px ) {
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-
#menubar {
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-
display: block;
+
-
}
+
-
#CB_top {
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-
padding-bottom: 0px;
+
-
}
+
-
#CB_top_CBNU_logo {
+
-
width: 100%;
+
-
margin: 0 auto;
+
-
color: white;
+
-
font-size: 45px;
+
-
padding-top: 15px;
+
-
text-align: center;
+
-
}
+
-
#CB_top_CBNU_logo_img {
+
-
background: url(https://static.igem.org/mediawiki/2012/2/2c/CBK_logo_003.png)
+
-
no-repeat;
+
-
width: 120px;
+
-
height: 120px;
+
-
margin: 0 auto;
+
-
float: none;
+
-
}
+
-
#CB_top_MENU {
+
-
width: 100%;
+
-
text-align: center;
+
-
padding-top: 20px;
+
-
}
+
-
#CB_top_MENU ul {
+
-
margin: 0;
+
-
padding: 0;
+
-
font-size: 16px;
+
-
padding-bottom: 10px;
+
-
}
+
-
#CB_top_MENU li {
+
-
display: inline-block;
+
-
*display: inline;
+
-
border-bottom: 5px solid #221B1B;
+
-
height: 20px;
+
-
padding: 0 15px;
+
-
margin: 0 4px;
+
-
}
+
-
#CB_top_MENU li:hover {
+
-
background: white;
+
-
border-bottom: 5px solid white;
+
-
}
+
-
#CB_top_MENU li:hover a {
+
-
color: #24BED3;
+
-
}
+
-
#CB_top_MENU a {
+
-
color: #0E0B0B;
+
-
}
+
-
}
+
-
 
+
-
/* Laptops, Desktops, etc ---- */
+
-
/*@media all and (min-width: 1024px) {
+
-
            body {
+
-
                font-family: 'Droid Sans', sans-serif;
+
-
                background-color: green;
+
-
            }
+
-
 
+
-
            #menubar {
+
-
                display: block;
+
-
            }
+
-
}*/
+
-
 
+
-
/* large Desktops */
+
-
@media all and (min-width: 1025px) {
+
-
#menubar {
+
-
display: block;
+
-
}
+
}
}
</style>
</style>
-
 
-
<script type="text/javascript">
 
-
$(function() {
 
-
$("*#scrolltotop").click(function() {
 
-
$("html,body").animate({
 
-
scrollTop : 0
 
-
});
 
-
});
 
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});
 
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</script>
 
</head>
</head>
Line 586: Line 37:
href="https://2012.igem.org/Team:CBNU-Korea">HOME</a></li>
href="https://2012.igem.org/Team:CBNU-Korea">HOME</a></li>
<li class="TEAM"><a href="#">TEAM</a></li>
<li class="TEAM"><a href="#">TEAM</a></li>
-
<li class="PROJECT"><a href="#">PROJECT</a></li>
+
<li class="PROJECT"><a
-
<li class="NOTEBOOK"><a href="#">NOTEBOOK</a></li>
+
href="https://2012.igem.org/Team:CBNU-Korea/Project">PROJECT</a></li>
 +
<li class="NOTEBOOK"><a
 +
href="https://2012.igem.org/Team:CBNU-Korea/Notebook">NOTEBOOK</a></li>
</ul>
</ul>
<ul>
<ul>
-
<li class="SAFETY"><a href="#">SAFETY</a></li>
+
<li class="SAFETY"><a
-
<li class="JUDGING"><a href="#">JUDGING</a></li>
+
href="https://2012.igem.org/Team:CBNU-Korea/Safety">SAFETY</a></li>
-
<li class="iGEM"><a href="#">iGEM</a></li>
+
<li class="JUDGING"><a
 +
href="https://2012.igem.org/Team:CBNU-Korea/JG/judging">JUDGING</a></li>
 +
<li class="iGEM"><a href="https://2012.igem.org/"
 +
target="_blank">iGEM</a></li>
</ul>
</ul>
</div>
</div>
Line 600: Line 56:
<div id="CB_content">
<div id="CB_content">
-
 
<div id="CB_subcontent">
<div id="CB_subcontent">
<div id="CB_sub_title">
<div id="CB_sub_title">
-
<h2>Minimal Genome Designer</h2>
+
<h2>TEAM</h2>
-
<h3>- Overview</h3>
+
<h3>- Team</h3>
</div>
</div>
 +
<div></div>
<div id="CB_sub_menu">
<div id="CB_sub_menu">
-
<ul>
+
 
-
<li class="OVERVIEW"><a
+
 
-
href="https://2012.igem.org/Team:CBNU-Korea/Project">01 +
+
<div id="CB_sub_mobile_menu">+ MENU</div>
-
Overview</a></li>
+
<ul class="CB_ul">
-
<li class="BD"><a
+
<li class="li_p"><a
-
href="https://2012.igem.org/Team:CBNU-Korea/Project/BD/Overview">02
+
href="https://2012.igem.org/Team:CBNU-Korea/Team/P">01 + Instructor</a></li>
-
+ Brick Designer</a></li>
+
<li class="li_a"><a
-
<li class="MGD"><a href="#">03 + Minimal Genome Designer</a></li>
+
href="https://2012.igem.org/Team:CBNU-Korea/Team/A">02 + A Team</a></li>
-
<li id="li_sub" class="MGD_Overview">- Overview</li>
+
<li class="li_b"><a
-
<li id="li_sub" class="MGD_Method">- Method</li>
+
href="https://2012.igem.org/Team:CBNU-Korea/Team/B">03 + B Team</a></li>
-
<li id="li_sub" class="MGD_Analysis">- Analysis</li>
+
<li class="li_c"><a
-
<li class="DOWNLOAD"><a
+
href="https://2012.igem.org/Team:CBNU-Korea/Team/C">04 + C Team</a></li>
-
href="https://2012.igem.org/Team:CBNU-Korea/Project/Download">04
+
-
+ Download</a></li>
+
-
<li class="TUTORIAL"><a
+
-
href="https://2012.igem.org/Team:CBNU-Korea/Project/Tutorial">05
+
-
+ Tutorial</a></li>
+
</ul>
</ul>
</div>
</div>
<div id="CB_sub_main">
<div id="CB_sub_main">
-
<div id="CB_sub_img"></div>
 
<div id="CB_sub_cont">
<div id="CB_sub_cont">
-
<h1>1. Overview</h1>
+
<img src="https://static.igem.org/mediawiki/2012/a/a5/CBK_Team_001.png" style="height: auto; width:100%;">
-
<p>- The importance of the transfer, saving and management of
+
-
bio-information is now closely related to the computers. Nowadays
+
-
bio-informatics are used in many fields from simple biological
+
-
models to complicated algorithm forecast and more. And in
+
-
synthetic biology, since designing a biological circuit by using
+
-
the computer became available, it has opened a new era. In the
+
-
past, synthetic biology used to find subjects like a genetic part
+
-
that is about a specific purpose and the connection between the
+
-
fastest designing process only by experiments. But now in the
+
-
future of synthetic biology, experiment and the computational
+
-
designing program must be in a mutual relationship. The purpose of
+
-
our project is to increase the efficiency of the experiment by
+
-
using the designing process of BioBrick prior to the experiment,
+
-
and improve the efficiency of the connection between the next
+
-
experiment conducted by the program user.</p>
+
-
<div id="scrolltotop"></div>
+
-
 
+
-
<h1>2. Feature</h1>
+
-
<h2>2-1. BioBrick Data Download</h2>
+
-
<p>- The registered BioBrick information needed for designing
+
-
in this program, can be easily downloaded without being typed in.</p>
+
-
<h2>2-2. Design</h2>
+
-
<p>- The user can arrange the BioBrick in any sequence they
+
-
want. And if they want, the user can put a proper Prefix, Suffix
+
-
restriction enzyme site between the Bricks by the software.</p>
+
-
<p>- By selecting the Plasmid Backbone and the restriction
+
-
enzyme in sequence, the cloning will be done automatically.</p>
+
-
<h2>2-3. Screen Shot</h2>
+
-
<p>- The BioBrick that the user designed from the program is
+
-
saved in image files to be readily used in Wiki or documents.</p>
+
-
<h2>2-4. Various Storage Formats</h2>
+
-
<p>- The project in designing in progress can be saved or
+
-
imported. Also, by saving the informations as a SBOL, GenBank,
+
-
Fasta form, the user can use the information that they design in
+
-
other programs as well.</p>
+
-
<div id="scrolltotop"></div>
+
-
 
+
-
<h1>3. The process of the program designing</h1>
+
-
<h2>3-1. Problem Recognition</h2>
+
-
<p>- In many common laboratories today, there is a limit that
+
-
the user themselves has to put in the BioBrick Data, and draw it
+
-
as an image after they finish the design. So we decided to develop
+
-
the designing a program that, based on BioBrick DataBase, directly
+
-
provide designing process with convenient additional functions as
+
-
well.</p>
+
-
<h2>3-2. Requirement Checking</h2>
+
-
<p>- We checked on other programs that many people are using
+
-
nowadays, and analyzed the steps that are needed in designing.</p>
+
-
<p>- For the connection within other programs that can be used
+
-
after the experiment, we checked on the needs of the saving
+
-
methods on GenBank, SBOL, Fasta.</p>
+
-
<h2>3-2. Design</h2>
+
-
<p>- Visual Studio 2010, 2012 (C#)</p>
+
-
<p>- Windows 7</p>
+
-
<p>- OleDB (MS OFFICE)</p>
+
-
<p>- * When running the program, Microsoft Runtime is required.</p>
+
-
<h2>3-2. Discussion and Feedback</h2>
+
-
<p>- Our team members repeated testing the program, finding the
+
-
errors and fixing the problems.</p>
+
-
<div id="scrolltotop"></div>
+
-
 
+
-
<h1>4. Future Work</h1>
+
-
<p>Our program is now version 1.0.0, and will be updated and
+
-
offer better information and performance about the designing
+
-
process in next versions. First, simplification of the
+
-
registration process of the iGEM Part will be offered. The
+
-
registration of BioBrick is now available only in online. But by
+
-
co-working with iGEM, we will develop a better functioning
+
-
program, and make it possible to design and register the Brick at
+
-
the same time. Secondly, we are planning to add a communication
+
-
function between the users. This function will help the users to
+
-
share opinions, and discuss designing information about a specific
+
-
Brick. This discussion will help the users improve their
+
-
experiment or project. Third, the expression rate will be produced
+
-
in a numerical value. The expression rate value is a score that
+
-
will show the users how the expression of the BioBrick designed by
+
-
cloning is working in the experiment. To make it as a score,
+
-
theoretical background and algorithm based on a lot of data are
+
-
required. The last is the import of the files with various saving
+
-
forms. Nowadays we can only save the designed BioBrick data after
+
-
exporting it. But the next version of the program will be improved
+
-
to read the data modified and saved in other process, and reading,
+
-
processing and saving it will be available as well.</p>
+
-
<div id="scrolltotop"></div>
+
</div>
</div>
</div>
</div>

Latest revision as of 03:38, 27 September 2012

Retrieved from "http://2012.igem.org/Team:CBNU-Korea/Team"