Template:Team:Amsterdam/shadow/graphs/test
From 2012.igem.org
{ script: "var Vcells=getInput('Vcells'),\
Vtotal=getInput('Vtotal');\ var Vsolution = Vtotal - Vcells;\ var c = arsenicModelConstants();\ c.Vc = Vcells*1e-3;\ c.Vs = Vsolution*1e-3;\ c.AsT = c.Vs*getInput('As3exInitial')*1e-6;\ c.v5 = getInput('v5')*1e-6;\ c.K5 = getInput('K5')*1e-6;\ c.ars2T = 0;\ c.pro = 0;\ c.beta4 = 0;\ var data = simulate(arsenicModelInitialization(c),3600,function(t,x){return arsenicModelGradient(c,x);});\ var d=[{title:'As(III)exT',data:[],args:{plot:'outer',Team:Groningen/Styles/As(III)ex}},\ {title:'As(III)inT',data:[],args:{plot:'inner',Team:Groningen/Styles/As(III)}}];\ var t = Number.NEGATIVE_INFINITY;\ for(var i=0; i<data.time.length; i++) {\ var f=data.time[i]/60;\ if (f>=t+0.1) {\ t = t+0.1;\ d[0].data.push({x:f,y:data.AsexT[i]*1e6});\ d[1].data.push({x:f,y:data.AsinT[i]*1e6});\ }\ }\ d.push({title:'As(III)exT Meng2004',\ data:[{x:1,y:8.47076050151002}, {x:10,y:6.51596961654617}, {x:20,y:4.3195753637778},\ {x:40,y:1.72783014551112}, {x:60,y:0.9371282145145}],\ args:{plot: 'outer', Team:Groningen/Styles/As(III)ex}});\ d.push({title:'As(III)inT Meng2004',\ data:[{x:1,y:101.917808219178}, {x:10,y:394.520547945205}, {x:20,y:723.287671232877},\ {x:40,y:1111.23287671233}, {x:60,y:1229.58904109589}],\ args:{plot: 'inner', Team:Groningen/Styles/As(III)}});\ for(j=2; j<d.length; j++) d[j].args.stroke.style = 'Dash';\ d;",
width: '10cm', height: '8cm', axes: {x: {title: "time (min)", minorLabels: false}, innery: {title: "concentration in cell (µM)", vertical: true, min: 0}, outery: {title: "concentration in solution (µM)", vertical: true, leftBottom: false, min: 0} }, plots: { 'inner': {type: 'Lines', vAxis: 'innery'}, 'outer': {type: 'Lines', vAxis: 'outery'} } }