2012 iGEM

CBNU-Korea

March - April

March. 26th – April. 1th

Tuesday

CBNU-KOREA team is organized
Had first meeting
Introduced about iGem & previous project of CBNU-KOREA

Thursday

· Planned plan of near future
(Start -> Find similar gene comparing sequence by BLAST in 15 species(DEG) -> Certify between ssential genes and result of BLAST -> Certify if it is equal or over than 80% -> If it is, adjust to 1500 species.)
· Department of Computer engineering : Planned to study for the possibilities of the automation of BLAST.
· Department of Statistics: Planned to calculate probability to be match between BLAST results and experimently presumed essential genes.
· Department of Microbiology: Planned to study for the database of NCBI(Variable of NC file).

Friday

Re-defined the name of the project of this year(BIDOB)
Planned to presume essential brick using NCBI data.

Apr. 2nd – Apr. 8th

Tuesday

Parsed a data of 15 species in NCBI and built DB for a first time.
Made a result of analysis and built it to DB.
Planned to study to have a understandable reliability(%) on our analysis.

Thursday

Build DB of NCBI information.

Friday

Presumption of Essential Gene : Grouped more than two species and analyzed characteristic of each genome. Studied a EGGS Site.
Analysis of location, direction and array of essential gene : Studied for organization analysis of statistic-biology. Studied some of research paper.
Implementing viewer : Planned to study for JAVA computer language.

Saturday

Presumption of Essential Gene : Find species-EG by analyzing in each species.
Presumption of Essential Gene : Find Essential gene by analyzing result between species.
Presumption of Essential Function : Analyze function of each essential genes.
Analyzing the array of genes : Analyze location and array of essential genes and every genes.
Implement Viewer by built DB.