Team:Johns Hopkins-Software/MedalFulfillment

From 2012.igem.org

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Gold Medal
Gold Medal
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-Have another team utilize the software developed by your team <br>
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<b>-Have another team utilize the software developed by your team </b><br>
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   &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Johns Hopkins Wetware <br>
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   &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-We had the <a href="https://2012.igem.org/Team:Johns_Hopkins-Wetware">Johns Hopkins Wetware</a> team use our software to annotate their sequences. <br>
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-Outline and detail how your software effects Human Practices in Synthetic Biology <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; -Results can be found <a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Collaboration">here</a> <br><br>
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<b>-Outline and detail how your software effects Human Practices in Synthetic Biology </b><br>
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Safety">Link to Safety Questions</a> <br>
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Safety">Link to Safety Questions</a> <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href= "https://2012.igem.org/Team:Johns_Hopkins-Software/PathogenDetection">Pathogen Detection </a> <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/PathogenDetection">Pathogen Detection </a> <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/BiobrickAnalysis Biobrick Annotation ">Accuracy Analysis</a> <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-We also use <a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Cloud">cloud computing</a> to speed up computationally-intensive tasks.<br><br>
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-Use SBOL in your software documentation <br>
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<b>-Use SBOL in your software documentation </b> <br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Autogene is capable of importing and exporting SBOL xml files. AutoDesign also uses SBOL icons for designing plasmids. <br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Autogene is capable of importing and exporting SBOL xml files.  
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview ">Usage of SBOL can be found here</a>  
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<br> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-AutoDesign also uses SBOL icons for designing plasmids. <br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Usage of SBOL can be found <a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Compatibility ">here</a>.
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Silver Medal
Silver Medal
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</div><br>
<p>
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  -Provide a detailed, draft specification for the next version of your software tool <br><br>
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  <b>-Provide a detailed, draft specification for the next version of your software tool </b><br>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Future Goals may be found under <a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview#futuregoals"> Software -> Overview</a>
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-Provide a demonstration of their software as a video tutorial on their wiki <br>
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<br><br><b>-Provide a demonstration of their software as a video tutorial on their wiki </b><br>
  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href = "http://ugrad.cs.jhu.edu/~eisinger/iGEM/Screencast.mov"> Screencast </a>
  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href = "http://ugrad.cs.jhu.edu/~eisinger/iGEM/Screencast.mov"> Screencast </a>
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Bronze Medal
Bronze Medal
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<p>
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-Register the team, have a great summer, and have fun attending the Jamboree <br>
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<b>-Register the team, have a great summer, and have fun attending the Jamboree </b><br><br>
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-Create and share a description of the team's project via the iGEM wiki <br>
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<b>-Create and share a description of the team's project via the iGEM wiki </b><br>
  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software">Main Page Description</a> <br>
  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software">Main Page Description</a> <br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview">Complete description of software can be found here</a> <br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-<a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview">Complete description of software can be found here</a> <br><br>
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-Present a Poster and Talk at the iGEM Jamboree <br>
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<b>-Present a Poster and Talk at the iGEM Jamboree </b><br><br>
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-Develop and make available via the The Registry of Software Tools an open source software tool that supports synthetic biology based on BioBrick standard biological parts <br>
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<b>-Develop and make available via the The Registry of Software Tools an open source software tool that supports synthetic biology based on BioBrick standard biological parts </b><br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Our code can be found on the <a href="https://github.com/igemsoftware">Registry of Software Tools</a><br>
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  &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;-Our code can be found on the <a href="https://github.com/igemsoftware/Johns_Hopkins_Software_2012">Registry of Software Tools</a><br>
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{{:Team:Johns_Hopkins-Software/header}}
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Latest revision as of 03:56, 4 October 2012

Gold Medal

-Have another team utilize the software developed by your team
     -We had the Johns Hopkins Wetware team use our software to annotate their sequences.
      -Results can be found here

-Outline and detail how your software effects Human Practices in Synthetic Biology
     -Link to Safety Questions
     -Pathogen Detection
     -We also use cloud computing to speed up computationally-intensive tasks.

-Use SBOL in your software documentation
     -Autogene is capable of importing and exporting SBOL xml files.
     -AutoDesign also uses SBOL icons for designing plasmids.
     -Usage of SBOL can be found here.

Silver Medal

-Provide a detailed, draft specification for the next version of your software tool
     -Future Goals may be found under Software -> Overview

-Provide a demonstration of their software as a video tutorial on their wiki
     - Screencast

Bronze Medal

-Register the team, have a great summer, and have fun attending the Jamboree

-Create and share a description of the team's project via the iGEM wiki
     -Main Page Description
     -Complete description of software can be found here

-Present a Poster and Talk at the iGEM Jamboree

-Develop and make available via the The Registry of Software Tools an open source software tool that supports synthetic biology based on BioBrick standard biological parts
     -Our code can be found on the Registry of Software Tools






















































































Autogene

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