Team:Cambridge/Project/Sporulation and Germination

From 2012.igem.org

(Difference between revisions)
(Sporage and Distribution)
(Sporage and Distribution)
Line 7: Line 7:
</span>
</span>
-
<span style="color:#585858">Tubes of the sporduino bacterial 'sensors' can sit in the user's cupboard, with a generous shelf life, until needed. When the user requires a specific sensor, the appropriate strain is selected and the bacteria can be germinated by following a simple protocol. The tube can then be placed into the arduino device, the test sample loaded and the concentration profile measured.  
+
<span style="color:#585858">Part of the main reason for choosing ''Bacillus subtilis'' as our chassis was because of it's abiltiy to form dormant spores. Tubes of the sporduino sporulated 'sensors' can sit in the user's cupboard, with a generous shelf life, until needed. When the user requires a specific sensor, the appropriate strain is selected and the bacteria can be germinated by following a simple protocol. The tube can then be placed into the arduino device, the test sample loaded and the concentration profile measured.  
</span>
</span>
-
<span style="color:#585858">Part of the main reason for choosing ''Bacillus subtilis'' as our chassis was because of it's abiltiy to form dormant spores. ''Sporage and Distribution'' aims to determine a procedure for inducing sporulation in ''Bacillus'', and developing a very simple, user friendly and field worthy protocol for germinating the spores. It is essential for the germination procedure to be as straight forward as possible, requiring minimal equipment and expertise, so that it could in theory be performed in the field, in a situation where the biosensor might be used.  
+
<span style="color:#585858">''Sporage and Distribution'' aims to determine a procedure for inducing sporulation in ''Bacillus'', and developing a very simple, user friendly and field worthy protocol for germinating the spores. It is essential for the germination procedure to be as straight forward as possible, requiring minimal equipment and expertise, so that it could in theory be performed in the field, in a situation where the biosensor might be used.  
</span>
</span>

Revision as of 16:20, 25 September 2012

Previous iGEM teams have charaterised an impressive array of inducible promoters, along with other elements of biosensing circuitry... Read More







Sporage and Distribution

An issue with existing biosensors is the longevity of the product. E.coli has been a popular biosensor chassis to date, however cultures require regular maintenance, or cumbersome and energy intensive freezing processes. Long term distribution and hassle-free storage requires a more robust chassis.

Part of the main reason for choosing Bacillus subtilis as our chassis was because of it's abiltiy to form dormant spores. Tubes of the sporduino sporulated 'sensors' can sit in the user's cupboard, with a generous shelf life, until needed. When the user requires a specific sensor, the appropriate strain is selected and the bacteria can be germinated by following a simple protocol. The tube can then be placed into the arduino device, the test sample loaded and the concentration profile measured.

Sporage and Distribution aims to determine a procedure for inducing sporulation in Bacillus, and developing a very simple, user friendly and field worthy protocol for germinating the spores. It is essential for the germination procedure to be as straight forward as possible, requiring minimal equipment and expertise, so that it could in theory be performed in the field, in a situation where the biosensor might be used.

The scheme used to generate, store and use the spores

Germination is a time consuming event. The sooner germination and outgrowth is completed, the quicker the biosensing capability of the system can be implemented, which is the primary goal of sporduino.

There are several synthetic biology approaches that can be taken to speed up germination. One operon we investigated is the spoVA operon. Upon over expression of spoVA under the germination specific, sspB promoter, germination rates were improved. See the design page for more information about how this was accomplished.

.

References