Team:Cambridge/Lab book/Week 6

From 2012.igem.org

(Difference between revisions)
(Monday)
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===Monday===
===Monday===
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'''[[Team:Cambridge/Protocols/PCRProtocol|PCR of vectors]]'''
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Not all products were obtained during Friday's PCR. Most of these missing products were large vector backbones. They are being run again, with a much longer extension time of 300s. If that fails, primers will be ordered to split the vectors into manageable chunks, and the PCR reattempted when they arrive.
Not all products were obtained during Friday's PCR. Most of these missing products were large vector backbones. They are being run again, with a much longer extension time of 300s. If that fails, primers will be ordered to split the vectors into manageable chunks, and the PCR reattempted when they arrive.
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The remaining stray product had a slightly tricky secondary structure at the 3' end. It will be run at a series of annealing temperatures in a PCR machine capable of a temperature gradient.
The remaining stray product had a slightly tricky secondary structure at the 3' end. It will be run at a series of annealing temperatures in a PCR machine capable of a temperature gradient.
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'''[[Team:Cambridge/Protocols/TransformationofB.subtilis|Transformation of ''Bacillus'' with riboswitch construct]]'''
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===Tuesday===
===Tuesday===

Revision as of 14:09, 31 July 2012

Week: 3 4 5 6 7

Contents

Monday

PCR of vectors


Not all products were obtained during Friday's PCR. Most of these missing products were large vector backbones. They are being run again, with a much longer extension time of 300s. If that fails, primers will be ordered to split the vectors into manageable chunks, and the PCR reattempted when they arrive.

PCR cycle x35:

  • 15s Denaturing at 95 C
  • 45s Annealing at 60 C
  • 300s Extension at 72 C

The remaining stray product had a slightly tricky secondary structure at the 3' end. It will be run at a series of annealing temperatures in a PCR machine capable of a temperature gradient.

Transformation of Bacillus with riboswitch construct


Tuesday

Wednesday

Thursday

Friday