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From 2012.igem.org

Comparison of the two ordered sequnces. For the forward sequence I had to tel SerialCloner it's Antiparallel:

Alignment of Sequence_1:  [sequencing_lovtap_reverse.xdna] with  Sequence_2: [sequencing_lovtap_forward.xdna] 

Similarity : 861/1008 (85.42 %)

Seq_1  1     ------------------------------------------------------------  0
                                                                         
Seq_2  1008  AACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAGAGCGCCCAATACGCAAGGAA  949


Seq_1  1     ------------------------------------------------------------  0
                                                                         
Seq_2  948   ACAGCTATGACCATGTTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAG  889


Seq_1  1     --------------GCCATGG-GAGTTATTAAGAGGTACCGGAATTCCTCAATCGGATTT  45
                              | |     | |||||||||||||||||||||||||||||||||
Seq_2  888   TGAGCGGAAGGCCCATGAGGCCAGTTAATTAAGAGGTACCGGAATTCCTCAATCGGATTT  829


Seq_1  46    GAGCAGGACCTCCTCGAGCCACTGCCGGAGTTCCACAGGGGCGGCTTTCAGGGAGTTGGA  105
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  828   GAGCAGGACCTCCTCGAGCCACTGCCGGAGTTCCACAGGGGCGGCTTTCAGGGAGTTGGA  769


Seq_1  106   TCCCCGTGTAATGGTAGCAATTCCGGCTCCCAGTTCGTTTTTCAGCTCTCTCTGAGACAT  165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  768   TCCCCGTGTAATGGTAGCAATTCCGGCTCCCAGTTCGTTTTTCAGCTCTCTCTGAGACAT  709


Seq_1  166   TTCGCCTCGGAGCAGCTCCTCCACAATTCGGACTCGTGTGCCCAGTGCTTCCCGTTCATC  225
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  708   TTCGCCTCGGAGCAGCTCCTCCACAATTCGGACTCGTGTGCCCAGTGCTTCCCGTTCATC  649


Seq_1  226   GGGAGTGAGCATGAGATTGAGGAGTGGCAGGTGGAGGTCGTTCTGGTAAGCGTTTTTCAG  285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  648   GGGAGTGAGCATGAGATTGAGGAGTGGCAGGTGGAGGTCGTTCTGGTAAGCGTTTTTCAG  589


Seq_1  286   GAGGTCCACAAAAGCGGCCTCGTCGATATTCTCGGCGGTTTTTTTGATGAGCATCACGCC  345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  588   GAGGTCCACAAAAGCGGCCTCGTCGATATTCTCGGCGGTTTTTTTGATGAGCATCACGCC  529


Seq_1  346   CTCTCGTTCAGCAGCATCCCTCACATGTTCAGTGCCATCCAGCTGGACTCCAATAAAGTA  405
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  528   CTCTCGTTCAGCAGCATCCCTCACATGTTCAGTGCCATCCAGCTGGACTCCAATAAAGTA  469


Seq_1  406   CTGGACGTCGCCCTTCTGATCTCTCATAGGCTGGAGGTGGAACAGGTTCCAGAATTTTTT  465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  468   CTGGACGTCGCCCTTCTGATCTCTCATAGGCTGGAGGTGGAACAGGTTCCAGAATTTTTT  409


Seq_1  466   GCCAGATTTGGTGTAGTTGATGAGCTGGACGGTGACCTCGGTCTGATTATCGATGGCGTC  525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  408   GCCAGATTTGGTGTAGTTGATGAGCTGGACGGTGACCTCGGTCTGATTATCGATGGCGTC  349


Seq_1  526   CCGGATTTTTCTCACAGTGGCTCTATCGGTTTCAGGTCCCTGGAGGAAGCGACAATTCCG  585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  348   CCGGATTTTTCTCACAGTGGCTCTATCGGTTTCAGGTCCCTGGAGGAAGCGACAATTCCG  289


Seq_1  586   GCCCAGAATCTCCTCTCTAGAGTACTCAGTGAGCTGGAGGAAGGAATCGGAAGCGAAAAT  645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  288   GCCCAGAATCTCCTCTCTAGAGTACTCAGTGAGCTGGAGGAAGGAATCGGAAGCGAAAAT  229


Seq_1  646   GATGGGATTATCGGGCAGTCGAGGGTCGGTGATCACAAAGTTTTTCTCAATTCTCTCCAG  705
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  228   GATGGGATTATCGGGCAGTCGAGGGTCGGTGATCACAAAGTTTTTCTCAATTCTCTCCAG  169


Seq_1  706   TGTTGTGGCCAGCATATCCACTTTCCGTTTTTTCTTTGGTCCTCCGTATTCGTCGATCCC  765
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  168   TGTTGTGGCCAGCATATCCACTTTCCGTTTTTTCTTTGGTCCTCCGTATTCGTCGATCCC  109


Seq_1  766   CAGAGCATCGGTGAACATCTGCTCAAACTCGAAGTCGGCCATATCCAGGGCCCCGTAAGG  825
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2  108   CAGAGCATCGGTGAACATCTGCTCAAACTCGAAGTCGGCCATATCCAGGGCCCCGTAAGG  49


Seq_1  826   GGCAGAATCGTGAGGTGTAAAGCCCATGGTGGCGCCCAAGCTTGGGGAGCTCATGGCGCG  885
             |||||||||||||||||||||||||||||||||||||||||| || |             
Seq_2  48    GGCAGAATCGTGAGGTGTAAAGCCCATGGTGGCGCCCAAGCTGGGAGC------------  1


Seq_1  886   CCTAGGCCTTGACGGCCTTCCGCCAATTCGCCCTATAGTGAGTCGTATTACGTCGCGCTC  945
                                                                         
Seq_2  0     ------------------------------------------------------------  1


Seq_1  946   ACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCG  1005
                                                                         
Seq_2  0     ------------------------------------------------------------  1


Seq_1  1006  CCT  1008
                
Seq_2  0     ---  1