Team:Freiburg/Notebook/Methoden
From 2012.igem.org
First Extension PCR (Toolkit)
This step is necessary to add the the necessary restriction sites to the Direpeats.
Pipette the following volumes into a PCR- tube:
Component | Volume |
Water, nuclease-free | 15,75 µl |
DMSO | 0,75 µl |
dNTPs | 0,5 µl |
Phusion Buffer | 5,0 µl |
Phusion Polymerase | 0,25 µl |
Primer forward | 1,25 µl |
Primer reverse | 1,25 µl |
Template | 0,25 µl |
Total | 25 µl |
run the following PCR program:
step | temperatur | time |
1. | 98 °C | 30 s |
2. | 98 °C | 8 s |
3. | 68 °C | 15 s |
4. | 72 °C | 4 s |
5. | 98 °C | 8 s |
6. | 70 °C | 15 s |
7. | 72 °C | 5 s |
8. | 72 °C | 5 min |
9. | 4 °C | store |
Repeat step 2. - 4. 15 times ans step 5. - 7. 30 times.
Second Extension PCR (Toolkit)
This step is necessary to add enzyme- binding –sites to the outer restriction sites.
Use the product of the first extension- PCR as template.
Pipette the following volumes into a PCR- tube:
PCR Purification
bla
Gel Run
bla
Ligation
bla
Colony PCR
bla
Mini-Prep
bla