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Team:Technion/22 August 2012
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Ilya
- Transformation of R0062+Fus1del in pSB1C3 and in pSB3C5 and of Fus2del in pSB1C3 and in pSB3C5. These clones will serve as positive controls for the plate reader assay. I think correct clones should give red colonies tomorrow.
Inbal
- 2 starters of the TOP10 bacteria containing the SP6 gene in pSB1C3 plasmid, I grow them for 8 hours in 37C incubator, then I mini preped the plasmidial DNA.
Also I did deletion PCR for the Bba_I13522 (the conc. of the template: 105ng/ul) , excluding the terminators in the part, I ran the PCR products on 1% agarose gel for 40 minutes. The expected band is 3kb size approximately. The results: A 4000bp band size (likely there was a mistake in the experiment).
After consultation with Hila, I decided to digest the plasmid (the original one, not the PCR-amplified) with Pst1 and then run it on a gel, so it will run in his linear form- The results wasn't comforting- there wasn't any band! I need to start all over again tomorrow...
Asaf
I ran the PCR products of the Riboswitch on extraction gel, and cut the bands from the gel.
Asaf and Shahar
PCR for extracting the different polymerase genes from the different plasmids.
Hila
- ligation for the MCS insert to the cut pSB1C3 plasmid.
- chemical transformation of the ligated product to Top 10 - Rb competent bacteria.
- recovery for pSB1C3+fuz_1 bacteria from glycerol stock.
please cross your fingers…
Lior
Great Success!! We got colonies! more ALP than xyIE.
We tried antother run for Chris's plasmids- this time with Tm of 62, 7 degrees more than last time.
And it worked! We got 4 chubby bands.
Colony PCR for ALP in order to verify the insert within the pT7 plasmid, we got 4 colonies out of 5 (4/5)
Noa
Evgeni
-Ligation of pPROLar cut with BamHI and HindIII with Bba_015. Reaction with no insert serves as control.
-Transformation of the ligated plasmid into TOP10 competent strain.
-Plating ligated plasmid+control on Kanamycin plates and growing at 37C overnight.
