Team:Wageningen UR/Protocol/DialysisPolero
From 2012.igem.org
Dialysis of the VLPs
This protocol is based on the CCMV VLP formation protocol. We made adjustments because Polero has a different pH at which the particle is stable. Besides, the number of dialysis steps is reduced and only 1 buffer is needed for the dialysis.
Reagents & Materials
Reagents:
- Formation Buffer
- Formation Buffer + 8M urea
Materials:
- Pipettes + pipettepoints
- Greinertubes
- Dialysis tubing
- Vortex
- French Press
- Centrifuge for Greiner tubes
- Sorval or a similar centrifuge
- Coldroom
Procedure
The temperature of the VLP’s is very important. All the work should be done in the cold room (4°C) and the used tubes have to be on ice.
- Resuspend the cells in 5 mL of Formation buffer
- Disrupt the cells by french press, cell pressure: 1000
- Add Formation buffer to 25 mL total volume
- Centrifuge the lysate until the insoluble fraction is pelleted – 4°C, 4700 rpm, 18 min
- Remove the supernatant completely and dissolve the pellet in 10 mL of cold Formation buffer containing 8 M urea (about 10-15 min). Vortex the pellet to easily resuspend it while cooling on ice. Do not allow the buffer to heat up above 25°C
- Allow the pellet to dissolve for 2-5 minutes
- Dilute the 10 mL of 8 M urea/ Formation buffer with 15 mL Formation buffer. If crystals form, the batch should be discarded
- Pellet everything that is not dissolved by centrifuging at 15000 rpm at 4°C for 15 minutes (Sorvall ultracentrifuge in the basement)
- Transfer the supernatant to a clean 50 mL Greiner tube
- Prepare a piece of dialysis tubing with a large diameter by soaking it in cooking demiwater until it opens up
- Put a tight knot on one side and fill the tubing with the supernatant
- Knot the tube on the other side leaving a small air bubble inside
- Dialyse the tube (about 25 mL volume) against 1x Formation buffer for 4 hours or overnight
- Dialysis is performed 6 times against 1x Formation(4h per dialysis, or overnight)
Continue further for Polero formation