Team:UC Davis/Data

From 2012.igem.org

(Difference between revisions)
Line 13: Line 13:
@import "/wiki/skins/igem/main.css?270";
@import "/wiki/skins/igem/main.css?270";
/*]]>*/</style>
/*]]>*/</style>
 +
<link rel="stylesheet" type="text/css" media="screen, projection" href="https://2012.igem.org/wiki/skins/common/shared.css?270" />
<link rel="stylesheet" type="text/css" media="screen, projection" href="https://2012.igem.org/wiki/skins/common/shared.css?270" />
<link rel="stylesheet" type="text/css" media="screen, projection" href="https://2012.igem.org/wiki/skins/igem/main.css?270" />
<link rel="stylesheet" type="text/css" media="screen, projection" href="https://2012.igem.org/wiki/skins/igem/main.css?270" />
Line 66: Line 67:
</script>  
</script>  
<script type="text/javascript" src="https://2012.igem.org/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
<script type="text/javascript" src="https://2012.igem.org/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
 +
<!-- Head Scripts -->
<!-- Head Scripts -->
<script src="https://2012.igem.org/wiki/skins/common/ajax.js?270"></script>
<script src="https://2012.igem.org/wiki/skins/common/ajax.js?270"></script>
Line 73: Line 75:
<script type="text/javascript"        src ="https://2012.igem.org/common/jquery-latest.min.js"></script>
<script type="text/javascript"        src ="https://2012.igem.org/common/jquery-latest.min.js"></script>
<script type="text/javascript"        src ="https://2012.igem.org/common/tablesorter/jquery.tablesorter.min.js"></script>
<script type="text/javascript"        src ="https://2012.igem.org/common/tablesorter/jquery.tablesorter.min.js"></script>
 +
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/common/tablesorter/themes/groupparts/style.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/common/tablesorter/themes/groupparts/style.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/common/table_styles.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/common/table_styles.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/forum/forum_styles.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/forum/forum_styles.css" />
<script type="text/javascript"        src ="https://2012.igem.org/forum/forum_scripts.js"></script>
<script type="text/javascript"        src ="https://2012.igem.org/forum/forum_scripts.js"></script>
-
 
Line 97: Line 99:
min-height:100%; /* real browsers */
min-height:100%; /* real browsers */
}
}
-
#top-section { z-index: 2; height: 10px; margin: 0px; margin-left: auto; margin-right: auto; margin-bottom: 0 !important; padding:0; border: none; font-size: 10px;}
+
#top-section { z-index: 2; height: 15px; margin: 0px; margin-left: auto; margin-right: auto; margin-bottom: 0 !important; padding:0; border: none; font-size: 10px;}
#p-logo { height:1px; overflow:hidden; display: none;}
#p-logo { height:1px; overflow:hidden; display: none;}
#search-controls { overflow:hidden; display:block; background: none; position: absolute; top: 100px; right: 40px;}
#search-controls { overflow:hidden; display:block; background: none; position: absolute; top: 100px; right: 40px;}
Line 104: Line 106:
#menubar.right-menu { width:300px; display:block; float:left; margin-top:-80px; border: none;}
#menubar.right-menu { width:300px; display:block; float:left; margin-top:-80px; border: none;}
.right-menu ul { border: none; width: 300px;}
.right-menu ul { border: none; width: 300px;}
-
#footer-box { background-color: #216085; border: none; width: 100%; margin: -10px auto 0 auto; padding: 20px 0;}
+
#footer-box { background-color: #216085; border: none; width: 100%; height: 100%; margin: -10px auto 0 auto; padding: 20px 0;}
.visualClear { display: none; }
.visualClear { display: none; }
#footer { border: none; width: 850px; margin: 0 auto; padding: 0;}
#footer { border: none; width: 850px; margin: 0 auto; padding: 0;}
Line 126: Line 128:
     margin: 0;
     margin: 0;
     padding: 0;
     padding: 0;
 +
    height:100%;
 +
#    height:auto !important;
}
}
Line 136: Line 140:
     padding-bottom: 10px;
     padding-bottom: 10px;
     background-color: #ffffff;
     background-color: #ffffff;
 +
#  height:100%;
 +
}
}
Line 166: Line 172:
     text-align: right;
     text-align: right;
     text-transform: lowercase;
     text-transform: lowercase;
-
  color: white;
 
}
}
Line 203: Line 208:
     color: white;
     color: white;
}
}
-
 
+
#newnavi {  
-
#nav {
+
        position:relative;
-
    position: relative;
+
        height:42px;
-
    height: 24px;
+
        width: 856px;
-
    width: 850px;
+
        margin-left: -2px;
-
#    margin-left: 10px;
+
         display:block;
-
#    margin: 0 auto 0 auto;
+
         background:transparent;
-
#    border-left: 1px solid #444444;
+
-
#    border-right: 1px solid #444444;
+
-
#    border-bottom: 1px solid #444444;
+
-
 
+
-
    background-color: white;
+
-
#    border: 0px solid black;
+
-
#    height: 0px;
+
-
#    width: 850px;
+
-
#    left: 220px;
+
-
#    top: -2px;
+
-
#    position: relative;}
+
-
 
+
-
#nav ul {
+
-
          
+
-
        list-style-type:none;
+
-
         margin:0;
+
-
        padding:0;
+
-
        overflow:hidden;}
+
-
#nav ul .groupb {
+
-
    float: right;
+
-
    list-style:none;
+
-
    padding: 0 .0em;}
+
-
 
+
-
#nav a:hover, #nav a:focus {
+
-
        opacity:0.7;
+
}
}
-
 
+
#newnavi .newmenu {
-
#slides {
+
        display:inline;
-
    position:relative;
+
        overflow:hidden;
-
    height:350px;
+
        padding:0px;
-
    width: 840px
+
        margin:0px;
-
   
+
        list-style-type:none;
 +
        height:24px;
 +
        list-style-image:none;
 +
        background:#0083a8;
}
}
-
 
+
#newnavi .newmenu li    {
-
#slides IMG {
+
         float:right;  
-
         position:absolute;
+
         height:24px;
-
         opacity:0.0;
+
         width: 103px;
-
         top:0px;  
+
         background:#0083a8;
-
         left:0px;
+
        border-left: solid 2px white;
-
         z-index:1;  
+
         border-right: solid 2px white;
}
}
-
 
+
#newnavi .newmenu .selected {
-
#slides .current {
+
        background: #f77706;
-
    z-index:3;
+
}
-
    opacity:1.0;
+
#newnavi .newmenu li a  {
 +
text-align:center; vertical-align:middle; width:82px; padding:5px 10px 5px 10px; display:block; color:#fff; text-decoration:none; font:14px arial, verdana, sans-serif; font-weight: bold;
}
}
-
 
+
#newnavi .newmenu li:hover a {
-
#slides .previous {
+
        text-decoration:none;
-
    z-index:2;
+
}
 +
#newnavi .newmenu ul    {
 +
position:absolute; left:-9999px; top:-9999px; list-style-type:none; list-style-image:none; margin:0px; border:0px; padding:0px; background:lavender;
 +
}
 +
#newnavi .newmenu li:hover      {
 +
position:relative; background: #05bcea;
 +
}
 +
#newnavi .newmenu li:hover ul  {
 +
left:0px; top:23px; background:lavender;  width:103px; opacity:0.7; z-index:3;
 +
}
 +
#newnavi .newmenu li:hover ul li        {
 +
        height:17px;
 +
        border:none;
 +
        background:lavender;
 +
}
 +
#newnavi .newmenu li:hover ul li a      {
 +
text-align:center; height:17px; padding:0px;display:block; font-size:12px; width:103px; line-height:16px; text-indent:0px; color:#444;
 +
background-color:transparent; text-decoration:none; border:0px solid transparent;     
 +
}
 +
#newnavi .newmenu li:hover ul li a:hover {
 +
height:18px; background:silver; color:#000; border:solid 0px #444;    
}
}
Line 265: Line 269:
position:relative;
position:relative;
top: 0px;
top: 0px;
-
width:830px;
+
width:790px;
left: 0px;
left: 0px;
background-color: #d2d2d2;
background-color: #d2d2d2;
margin-top: 0px;
margin-top: 0px;
border-radius: 4px;
border-radius: 4px;
-
padding: 30px 10px 10px 10px;
+
padding: 30px;
font: sans-serif;
font: sans-serif;
font-size: 13px;
font-size: 13px;
Line 287: Line 291:
font-weight: bold;
font-weight: bold;
color: #016D8B;
color: #016D8B;
 +
}
 +
 +
.floatbox3 article{
 +
font-size: 14px;
 +
color: #000000;
}
}
Line 326: Line 335:
    <ul>
    <ul>
  <li style='color:#014457; cursor:default'><a>teams</a></li>
  <li style='color:#014457; cursor:default'><a>teams</a></li>
-
                    <li class='selected'        ><a href="https://2012.igem.org/Team:UC_Davis/Data">Page</a></li>
+
                    <li class='selected'        ><a href="https://2012.igem.org/Team:UC_Davis">Page</a></li>
-
                 <li class='new'><a href="https://2012.igem.org/wiki/index.php?title=Talk:Team:UC_Davis/Data&amp;action=edit&amp;redlink=1">Discussion</a></li>
+
 
-
               <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis/Data&action=edit">Edit</a></li>
+
                 <li class='new'><a href="https://2012.igem.org/wiki/index.php?title=Talk:Team:UC_Davis&amp;action=edit&amp;redlink=1">Discussion</a></li>
-
                           <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis/Data&amp;action=history">History</a></li>
+
               <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis&action=edit">Edit</a></li>
-
                 <li><a href="https://2012.igem.org/Special:MovePage/Team:UC_Davis/Data">Move</a></li>
+
                           <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis&amp;action=history">History</a></li>
-
                           <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis/Data&amp;action=watch">Watch</a></li>
+
                 <li><a href="https://2012.igem.org/Special:MovePage/Team:UC_Davis">Move</a></li>
 +
                           <li><a href="https://2012.igem.org/wiki/index.php?title=Team:UC_Davis&amp;action=watch">Watch</a></li>
  <li><a href="https://igem.org/Login">Log in</a></li>
  <li><a href="https://igem.org/Login">Log in</a></li>
    </ul>
    </ul>
  </div>
  </div>
-
   
+
  <div id="newnavi">
-
      <div id="nav">
+
    <ul class="newmenu">
-
        <ul>
+
         <li ><a href="https://2012.igem.org/" title="Back to iGEM">iGEM</a></li>
-
         <li class="groupb"><a href="https://2012.igem.org/" title="Back to iGEM">
+
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_09.jpg"></a></li>
+
-
         <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Attributions" title="Attributions">
+
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Attributions" title="Attributions">Attributions</a></li>
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_08.jpg"></a></li>
+
-
         <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Data" title="Data">
+
         <li class="selected"><a href="./Data.htm" title="Data">Data</a>
-
<img src="https://static.igem.org/mediawiki/2012/5/5a/UCDMain-button_07selected.jpg"></a></li>
+
          <ul>
 +
            <li ><a href="./Data.htm ">Data 1</a></li>
 +
            <li ><a href="./Data.htm ">Data 2</a></li>
 +
            <li ><a href="./Data.htm ">Data 3</a></li>
 +
        </ul>
 +
        </li>
 +
        <li ><a href="./Notebook.htm" title="Notebook">Notebook</a>
 +
          <ul>
 +
            <li ><a href="./Notebook.htm ">Week 1</a></li>
 +
            <li ><a href="./Notebook.htm ">Week 2</a></li>
 +
            <li ><a href="./Notebook.htm ">Week 3</a></li>
 +
          </ul>
 +
        </li>
-
         <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Notebook" title="Notebook">
+
         <li ><a href="./Safety.htm" title="Safety">Safety</a></li>
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_06.jpg"></a></li>
+
-
         <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Safety" title="Safety">
+
         <li ><a href="./Project.htm" title="Project">Project</a></li>
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_05.jpg"></a></li>
+
        <li ><a href="./Team.htm" title="Team">Team</a></li>
 +
        <li ><a href="./Home.htm" title="Home">Home</a></li>
 +
    </ul>
 +
  </div>
 +
 +
 +
<img src="http://img.photobucket.com/albums/v26/bluemelon/data_banner.jpg" width="850" height="269">
-
        <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Project" title="Project">
+
  <div id="bodyContent">  
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_04.jpg"></a></li>
+
            <div id="contentSub"></div>
-
        <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis/Team" title="Team">
 
-
<img src="http://img.photobucket.com/albums/v26/bluemelon/main-button_03.jpg"></a></li>
 
-
 
-
        <li class="groupb"><a href="https://2012.igem.org/Team:UC_Davis" title="Home">
 
-
<img src="https://static.igem.org/mediawiki/2012/c/c4/UCDMain-button_02normal.jpg"></a></li>
 
-
        </ul>
 
-
      </div> 
 
<br>
<br>
-
<!--<a><h1 class="firstHeading">Team:UC Davis</h1></a>-->
 
 +
  <div class="floatbox3">
 +
<h1> Data</h1>
 +
The accumulation of plastic products poses a hazard to the environment, as well as humans, through drinking water contamination. This threat led us to develop a degradation pathway to turn the polyethylene terephthalate into different substrates. We produce terephthalic acid and ethylene glycol. Ethylene glycol is a moderately toxic substance, which is oxidized to glycolic acid. The glycolic acid is further oxidized to oxalic acid – a toxic substance that affects the central nervous system via the liver. However, in the environment, the ethylene glycol will be degraded by hydroxyl radicals and in sewage sludge, it is readily biodegradable. Because ethylene glycol must be ingested to pose a problem, researchers take extra precaution to make sure there are no splashes of ethylene glycol in the laboratory and the wastes will be disposed of in the appropriate hazardous waste receptacles. Ethylene glycol can also be a mild irritant if it comes in contact with the skin or if it is inhaled, so researchers wear eye protection as well as gloves and lab coats, and always work with ethylene glycol in the confine of a fume hood. Also, in our constructs, we have produced enzymes that will degrade ethylene glycol into glycoaldehyde and then glycolate. The glycolate has the potential to be turned in to oxaloacetate, a metabolic intermediate. In the environment, ethylene glycol can potentially be toxic within waterways, however the team made sure to dispose of ethylene glycol in a responsible way.
 +
  </div>
-
<div id="bodyContent">
 
-
            <div id="contentSub"></div>
 
-
<br>
 
-
 
-
<div class="floatbox3">
 
-
<h1> Data </h1>
 
</div>
</div>
-
<p>Here goes our data</p>
+
<script>if (window.runOnloadHook) runOnloadHook();</script>
-
<!--
+
-
<div id="template" style="text-align: center; font-weight: bold; font-size: large; color: #c2c2c2; padding: 5px;">
+
-
This is a template page. READ THESE INSTRUCTIONS.
+
</div>
</div>
-
<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #c1c1c1; padding: 5px;">
 
-
You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples.
 
-
</div>
 
-
<div id="warning" style="text-align: center; font-weight: bold; font-size: small; color: #cccccc; padding: 5px;">
 
-
You <strong>MUST</strong> have all of the pages listed in the menu below with the names specified. PLEASE keep all of your pages within your teams namespace. 
 
</div>
</div>
-
<p><br />
 
-
</p><p><br />
 
-
</p>
 
-
<table align="justify">
 
-
<tr>
 
-
<td>You can write a background of your team here.  Give us a background of your team, the members, etc.  Or tell us more about something of your choosing.
 
-
</td><td><div class="thumb tright"><div class="thumbinner" style="width:182px;"><a href="https://2012.igem.org/wiki/index.php?title=Special:Upload&amp;wpDestFile=UC_Davis_logo.png" class="new" title="File:UC Davis logo.png">File:UC Davis logo.png</a>  <div class="thumbcaption">200px</div></div></div>
 
-
</td></tr>
 
-
<tr>
 
-
<td>
 
-
<p><i>Tell us more about your project.  Give us background.  Use this as the abstract of your project.  Be descriptive but concise (1-2 paragraphs)</i>
 
-
</p>
 
-
</td><td><div class="thumb tright"><div class="thumbinner" style="width:182px;"><a href="/wiki/index.php?title=Special:Upload&amp;wpDestFile=UC_Davis_team.png" class="new" title="File:UC Davis team.png">File:UC Davis team.png</a>  <div class="thumbcaption">Your team picture</div></div></div>
 
-
</td></tr>
 
-
<tr>
 
-
<td>
 
-
</td><td align="center"><strong class="selflink"> Team UC_Davis</strong>
 
-
</td></tr></table>
 
-
<p><br />
 
-
</p>
 
-
<table style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" width="62%" align="center">
 
-
<tr>
 
-
<th align="center"><strong class="selflink">Home</strong>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Team" title="Team:UC Davis/Team">Team</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team.cgi?year=2012&amp;team_name=UC_Davis" class="external text" rel="nofollow">Official Team Profile</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Project" title="Team:UC Davis/Project">Project</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Parts" title="Team:UC Davis/Parts">Parts Submitted to the Registry</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Modeling" title="Team:UC Davis/Modeling">Modeling</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Notebook" title="Team:UC Davis/Notebook">Notebook</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Safety" title="Team:UC Davis/Safety">Safety</a>
 
-
</th><th align="center"><a href="https://2012.igem.org/Team:UC_Davis/Attributions" title="Team:UC Davis/Attributions">Attributions</a>
 
-
</th></tr></table>
 
-
-->
 
-
<!--
 
-
NewPP limit report
 
-
Preprocessor node count: 4/1000000
 
-
Post-expand include size: 0/2097152 bytes
 
-
Template argument size: 0/2097152 bytes
 
-
Expensive parser function count: 0/100
 
-
-->
 
-
 
-
<!-- Saved in parser cache with key 2012_igem_org:pcache:idhash:1318-0!1!0!!en!2!edit=0 and timestamp 20120705172055 -->
 
-
<!--
 
-
<div class="printfooter">
 
-
Retrieved from "<a href="https://2012.igem.org/Team:UC_Davis">https://2012.igem.org/Team:UC_Davis</a>"</div>
 
-
<div id="catlinks"><div id='catlinks' class='catlinks catlinks-allhidden'></div></div>
 
-
-->
 
-
<!-- end content -->
 
-
<!-- <div class="visualClear"></div>  -->
 
-
</div>
 
-
    </div>
 
-
 
-
<script>if (window.runOnloadHook) runOnloadHook();</script>
 
-
</div>
 
-
<!-- Served in 0.192 secs. -->
 
</body>
</body>
</html>
</html>

Revision as of 22:04, 23 July 2012

Team:UC Davis - 2012.igem.org


Data

The accumulation of plastic products poses a hazard to the environment, as well as humans, through drinking water contamination. This threat led us to develop a degradation pathway to turn the polyethylene terephthalate into different substrates. We produce terephthalic acid and ethylene glycol. Ethylene glycol is a moderately toxic substance, which is oxidized to glycolic acid. The glycolic acid is further oxidized to oxalic acid – a toxic substance that affects the central nervous system via the liver. However, in the environment, the ethylene glycol will be degraded by hydroxyl radicals and in sewage sludge, it is readily biodegradable. Because ethylene glycol must be ingested to pose a problem, researchers take extra precaution to make sure there are no splashes of ethylene glycol in the laboratory and the wastes will be disposed of in the appropriate hazardous waste receptacles. Ethylene glycol can also be a mild irritant if it comes in contact with the skin or if it is inhaled, so researchers wear eye protection as well as gloves and lab coats, and always work with ethylene glycol in the confine of a fume hood. Also, in our constructs, we have produced enzymes that will degrade ethylene glycol into glycoaldehyde and then glycolate. The glycolate has the potential to be turned in to oxaloacetate, a metabolic intermediate. In the environment, ethylene glycol can potentially be toxic within waterways, however the team made sure to dispose of ethylene glycol in a responsible way.