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Team:Cambridge/PCRcolony
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CharlotteBG (Talk | contribs) (→Colony PCR:) |
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| + | !align="center"|[[Team:Cambridge|Home]] | ||
| + | !align="center"|[[Team:Cambridge/Team|Team]] | ||
| + | !align="center"|[https://igem.org/Team.cgi?year=2012&team_name=Cambridge Official Team Profile] | ||
| + | !align="center"|[[Team:Cambridge/Project|Project]] | ||
| + | !align="center"|[[Team:Cambridge/Parts|Parts Submitted to the Registry]] | ||
| + | !align="center"|[[Team:Cambridge/Modeling|Modeling]] | ||
| + | !align="center"|[[Team:Cambridge/Notebook|Notebook]] | ||
| + | !align="center"|[[Team:Cambridge/Safety|Safety]] | ||
| + | !align="center"|[[Team:Cambridge/Attributions|Attributions]] | ||
| + | !align="center"|[[Team:Cambridge/Sponsors|Sponsors]] | ||
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==Colony PCR:== | ==Colony PCR:== | ||
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|colspan="2"|Step 3 (final extension)||72||300 | |colspan="2"|Step 3 (final extension)||72||300 | ||
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Revision as of 15:19, 12 July 2012
| Home | Team | Official Team Profile | Project | Parts Submitted to the Registry | Modeling | Notebook | Safety | Attributions | Sponsors |
|---|
Colony PCR:
Used to amplify DNA directly from cell culture, the reaction is the same as for normal PCR but with modified reaction composition and cycle settings, here shown for a 50 µl reaction using Taq polymerase.
| Reagent | Volume (µl) | Final Concentration |
| Water | 35.7 | |
| 10 mM dNTPs | 1 | 200 µM |
| 10 x NH4 buffer | 5 | 1x |
| Forward Primer | 2.5 | 0.5 µM |
| Reverse Primer | 2.5 | 0.5 µM |
| Template Cells | 1.3 (from liquid culture or picked colony | |
| Taq polymerase 5u/µl | 1 | 0.1 u/ µl |
PCR machine settings:
| Temperature (oc) | Time (s) | ||
| Step 1 (cell breakage) | 95 | 360 | |
| Step 2 (Cycle 30x) | Denaturing | 98 | 10 |
| Annealing | 60 | 30 | |
| Elongation | 72 | 120 | |
| Step 3 (final extension) | 72 | 300 | |
