Team:Edinburgh/Project/Bioelectric-Interface/Microbial-Half-Fuel-Cells

From 2012.igem.org

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We have designed and tested a growth-based arsenic biosensor with a direct electric output.<br /><br />
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We have designed and tested a growth-based arsenic biosensor with a direct electric output. In order to test the principle of this device we have transformer E. coli JM109 with Edinburgh 2006 J33203 arsenic promoter BioBrick linked to lacZ gene responsible for lactose degradation. We have then prepared 3 half-fuel cells with lactose medium (M9 with trace elements and thiamine + 1% lactose): <br />
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<img src= "https://static.igem.org/mediawiki/2012/4/4e/Growth_based_biosensor.jpg"> <br />
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1) J33203 + lacZ in medium with sodium arsenate (100 parts per bilion concentration)<br />
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2) J33203 + lacZ in medium without sodium arsenate <br />
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3) control, WT E. coli in medium with sodium arsenate (100 parts per bilion concentration)<br /><br />
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<img src= "https://static.igem.org/mediawiki/2012/4/4e/Growth_based_biosensor.jpg" width="700"> <br />
Fig 4: Growth-based arsenic biosensor: change in voltage over time using <i>E. coli</i> transformed with J33203 and lacZ and WT <i>E. coli</i> as control<br /><br />
Fig 4: Growth-based arsenic biosensor: change in voltage over time using <i>E. coli</i> transformed with J33203 and lacZ and WT <i>E. coli</i> as control<br /><br />
Great success!
Great success!

Revision as of 13:16, 26 October 2012

Bio-electric Interface:

Microbial half fuel cells

Methods


The half fuel cells were constructed using the following components provided by Matthew Knighton from Dr Bruce Ward’s lab:
- 250 ml or 500 ml glass bottle
- A standard plastic cap with two holes drilled for electrodes
- carbon weave electrode fixed to the cap with silicone sealant
- reference electrode "red rod" REF201 available for sale from Radiometer analytical

- Following the assembly bottles were autoclaved (reference electrodes were instead sterilised with alcohol as they are temperature sensitive). In sterile conditions, reference electrodes were dipped in alcohol, inserted into the cap of the bottles and sealed with silicon sealant. The half fuel cells were then filled with media, inoculated with bacteria and sealed with parafilm in order to ensure anaerobic growth. The bacteria were left to grow at room temperature. (Figure 1)

- Media used: standard LB or M9 (minimal growth medium) supplemented with 1% lactose, 0,4% glycerol or 0,4% sodium acetate.

- Measurements were obtained using a digital multimeter.

Results

- We have examined the behaviour of S. oneidensis and E. coli in different media using half fuel cells. We managed to obtain results using the following media: LB, M9 with glycerol and M9 with sodium acetate. The results are summarised in figures 2 and 3 below. We also performed a measurement for Citrobacter freundii to see whether it differs from other bacteria.


Figure 1: Our microbial half fuel cells with S. oneidensis and E. coli


Figure 2: Half fuel cells experiments 1 and 2, using LB medium for growth of S. oneidensis and E. coli. Experiment 1 (left) was performed using 500 ml of medium while experiment 2 (right) was performed using 250 ml of medium.


Figure 3: Half fuel cells experiments 3 and 4, using M9 medium for growth of S. oneidensis, E. coli and Citrobacter freundii. Experiment 3 (left) was performed using 250 ml of medium M9 with 0,4% glycerol while experiment 4 (right) was performed using 250 ml of medium M9 with 0,4% sodium acetate. In experiment 4, C. freundii was also tested.

Growth-based biosensor

We have designed and tested a growth-based arsenic biosensor with a direct electric output. In order to test the principle of this device we have transformer E. coli JM109 with Edinburgh 2006 J33203 arsenic promoter BioBrick linked to lacZ gene responsible for lactose degradation. We have then prepared 3 half-fuel cells with lactose medium (M9 with trace elements and thiamine + 1% lactose):
1) J33203 + lacZ in medium with sodium arsenate (100 parts per bilion concentration)
2) J33203 + lacZ in medium without sodium arsenate
3) control, WT E. coli in medium with sodium arsenate (100 parts per bilion concentration)


Fig 4: Growth-based arsenic biosensor: change in voltage over time using E. coli transformed with J33203 and lacZ and WT E. coli as control

Great success!

Acknowledgements

We would like to thank Dr Bruce Ward and Matthew Knighton for their help with the fuel cells and for lending us their lab equipment.

Bibliography (expand)

1. Jensen, H. M., Albers, A. E., Malley, K. R., Londer, Y. Y. , Cohen, B. E., Helms, B. A., Weigele, P., Groves, J. T. & Ajo-Franklin, C. M. (2010). Engineering of a synthetic electron conduit in living cells. PNAS 107, 19213-19218

2. Stewart, V., Lu, Y. & Darwin, A. J. (2002). Periplasmic Nitrate Reductase (NapABC Enzyme) supports Anaerobic Respiration by Escherichia coli K-12. Journal of Bacteriology 184, 1314-1323

3. Marritt, S. J., Lowe, T. G., Bye, J., McMillan, D.G.G., Shi, L., Frederickson, J., Zachara, J., Richardson, D. J., Cheesman, M. R., Jeuken L.J.C. & Butt, J. N. (2012). A functional description of CymA, an electron-transfer hub supporting anaerobic respiratory flexibility in Shewanella. Biochemical Journal 444, 465-474

4. Richter, K., Schicklberger, M., Gescher, J. (2011). Dissimilatory reduction of extracellular electron acceptors in anaerobic respiration. Applied and Environmental Microbiology 78, 913-921

Close bibliography.