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Team:Purdue/Modeling
From 2012.igem.org
(Difference between revisions)
| Line 7: | Line 7: | ||
</h1> | </h1> | ||
| - | < | + | <h2> Design </h2> |
| - | Levels of Abstractions </ | + | <ul> |
| + | <h4> | ||
| + | <li> Desired Outcomes of Models </li> | ||
| + | <ul> | ||
| + | </ul> | ||
| + | <li> Levels of Abstractions </li> | ||
<ul> | <ul> | ||
| - | <h5> <li> Biofilter response to Environmental conditions < | + | <h5> <li> Biofilter response to Environmental conditions </li> |
<ul> | <ul> | ||
<li> Shear </li> | <li> Shear </li> | ||
<li> Flow </li> | <li> Flow </li> | ||
<li> Temperature </li> | <li> Temperature </li> | ||
| - | <li> Abiotic Surface (Adhesion) </li> </ul | + | <li> Abiotic Surface (Adhesion) </li> </ul> |
<li> Formation of Silica Matrix </li> | <li> Formation of Silica Matrix </li> | ||
| Line 23: | Line 28: | ||
<li> Model of Bacterial Growth, Death, Breaking Off </li> | <li> Model of Bacterial Growth, Death, Breaking Off </li> | ||
</ul> | </ul> | ||
| - | <li> Expression of Proteins | + | <li> Expression of Proteins </li> |
<ul> | <ul> | ||
<li> Response to addition of IPTG </li> | <li> Response to addition of IPTG </li> | ||
| Line 29: | Line 34: | ||
<li> Control Systems </li> | <li> Control Systems </li> | ||
<li> Fine Tuning of Protein Expression with RBS/Promoter combination variants </li> | <li> Fine Tuning of Protein Expression with RBS/Promoter combination variants </li> | ||
| + | </ul> </h5> | ||
| + | </ul> | ||
| + | |||
| + | <li> Platforms </li> | ||
| + | <li> Considerations and Assumption </li> | ||
</ul> | </ul> | ||
| + | </h4> | ||
Revision as of 18:00, 8 July 2012
Modeling
Design
- Desired Outcomes of Models
- Levels of Abstractions
- Biofilter response to Environmental conditions
- Shear
- Flow
- Temperature
- Abiotic Surface (Adhesion)
- Formation of Silica Matrix
- BioFilm Development
- Model of Bacterial Growth, Death, Breaking Off
- Expression of Proteins
- Response to addition of IPTG
- Optimal Production rate/expression of Curli and OmpA-Silicatein Alpha protiens
- Control Systems
- Fine Tuning of Protein Expression with RBS/Promoter combination variants
- Platforms
- Considerations and Assumption
