Team:EPF-Lausanne/Protocol/Silver staining

From 2012.igem.org

(Difference between revisions)
(Gel making)
(Ingredients)
Line 6: Line 6:
== Preparation of Gel==
== Preparation of Gel==
=== Ingredients ===
=== Ingredients ===
-
'''Note:''' Please, adapt percentage of polyacrilamide according to the size of the protein, according to the following table
+
'''Note:''' Please, adapt the final percentage of polyacrilamide according to the size of the protein.
 +
 
{| class="wikitable" style="text-align: center; color: black;"
{| class="wikitable" style="text-align: center; color: black;"
 +
|'''Expected protein size'''
 +
|'''Final polyacrilamide concentration '''
 +
|-
|4-40 kDA
|4-40 kDA
|20%
|20%
Line 26: Line 30:
|}
|}
-
+
For a Gel percentage of 7.5 % the proportions are the following:
{| class="wikitable" style="text-align: center; color: black;"
{| class="wikitable" style="text-align: center; color: black;"
|'''Separating gel'''
|'''Separating gel'''
-
|-
+
|'''Volume, en mL'''
-
|Gel percentage
+
-
|7.5 %
+
|-
|-
|30% Polyacrylamide
|30% Polyacrylamide
-
|10 mL
+
|10
|-
|-
|1.5M Tris (pH 8.8)
|1.5M Tris (pH 8.8)
-
|10 mL
+
|10
|-
|-
|10% Ammonium persulfate
|10% Ammonium persulfate
-
|0.4 mL
+
|0.4
|-
|-
|10% SDS
|10% SDS
-
|0.4 mL
+
|0.4
|-
|-
|TEMED
|TEMED
-
|0.038 mL
+
|0.038
|-
|-
|H2O
|H2O
-
|19.2 mL
+
|19.2
|-
|-
|Total volume
|Total volume
-
|40 mL
+
|40
|-
|-

Revision as of 23:59, 26 September 2012

Protocol: Silver Staining


Preparation of Gel

Ingredients

Note: Please, adapt the final percentage of polyacrilamide according to the size of the protein.


Expected protein size Final polyacrilamide concentration
4-40 kDA 20%
12-45 kDA 15%
10-70 kDA 12.5%
15-100 kDA 10%
25-200 kDA 8%

For a Gel percentage of 7.5 % the proportions are the following:

Separating gel Volume, en mL
30% Polyacrylamide 10
1.5M Tris (pH 8.8) 10
10% Ammonium persulfate 0.4
10% SDS 0.4
TEMED 0.038
H2O 19.2
Total volume 40
Stacking gel
Gel percentage 5 %
30% Polyacrylamide 1.36 mL
1M Tris (pH 6.8) 1 mL
10% Ammonium persulfate 0.08 mL
10% SDS 0.08 mL
TEMED 0.008 mL
H2O 5.44 mL
Total volume 8 mL


Team-EPF-Lausanne ssp.jpg