Team:Hong Kong-CUHK/BIOBRICKS CHAR

From 2012.igem.org

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       <p class="aloveofthunder" style="line-height:normal; margin-bottom: 35px"><strong>Characterization of promoter BBa_J23100</strong></p>
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       <p class="aloveofthunder" style="line-height:normal; margin-bottom:35px"><strong>Characterization of promoter BBa_J23100 activity in various <em>E. coli</em> strains</strong></p>
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      <p>We aim at testing the effect conferred by different <em>E. coli</em> strains to expression of red fluorescence protein reporter downstream of J23100 by transforming this biobrick to different bacterial strains. It allows us to select the suitable strain(s) for this constitutive promoter.</p>
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      <p>Florescence plate reader was used to take readings of fluorescence emission of 635nm and absorbance at 600nm (OD600) between time intervals of 12 hours on each strain. The measurements were started when the cultures reached a OD600 of around 0.4 that represents log phase of active proliferation. Growth curve and fluorescence intensity against time were plotted to compare cell growth and protein expression on different strains.</p>
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      <p>Three independent experiments were conducted. No significant difference was observed on the growth curves, indicating a similar growth rate among the three bacterial strains with BBa_J23100 transformed. It implies the promoter does not cause cell toxicity or growth inhibition of these three bacterial strains.</p>
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      <p><center><img width="500" height="402" src="https://static.igem.org/mediawiki/2012/4/41/Char1.png" alt="Description: ::Desktop:iGEM 2012:Characterization on Bba_J23100 OD600.jpg" style="margin:15px" /></center></p>
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      <p>For the protein expression, the results showed that the fluorescence intensity of reporter in DH5α was significantly lower compared with TOP10 and BL21(DE3).</p>
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      <p><center><img width="500" height="396" src="https://static.igem.org/mediawiki/2012/a/ac/Char2.png" alt="Description: ::Desktop:iGEM 2012:Characterization on Bba_J23100-fluoresence.jpg" style="margin:15px" /></center></p>
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      <p>To conclude, DH5α is not an optimal strain to utilize promoter BBa_J23100, while TOP10 and BL 21(DE3) can effectively express the reporter. Therefore, in downstream application of our light sensing biobricks (BBa_K786001, BBa_K786002, BBa_K786003) in which BBa_J23100 was used, DH5α are not used.</p>
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Revision as of 09:38, 26 September 2012



 

 

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Characterization of promoter BBa_J23100 activity in various E. coli strains

We aim at testing the effect conferred by different E. coli strains to expression of red fluorescence protein reporter downstream of J23100 by transforming this biobrick to different bacterial strains. It allows us to select the suitable strain(s) for this constitutive promoter.

Florescence plate reader was used to take readings of fluorescence emission of 635nm and absorbance at 600nm (OD600) between time intervals of 12 hours on each strain. The measurements were started when the cultures reached a OD600 of around 0.4 that represents log phase of active proliferation. Growth curve and fluorescence intensity against time were plotted to compare cell growth and protein expression on different strains.

Three independent experiments were conducted. No significant difference was observed on the growth curves, indicating a similar growth rate among the three bacterial strains with BBa_J23100 transformed. It implies the promoter does not cause cell toxicity or growth inhibition of these three bacterial strains.

Description: ::Desktop:iGEM 2012:Characterization on Bba_J23100 OD600.jpg

For the protein expression, the results showed that the fluorescence intensity of reporter in DH5α was significantly lower compared with TOP10 and BL21(DE3).

Description: ::Desktop:iGEM 2012:Characterization on Bba_J23100-fluoresence.jpg

To conclude, DH5α is not an optimal strain to utilize promoter BBa_J23100, while TOP10 and BL 21(DE3) can effectively express the reporter. Therefore, in downstream application of our light sensing biobricks (BBa_K786001, BBa_K786002, BBa_K786003) in which BBa_J23100 was used, DH5α are not used.

 


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