Team:Exeter/lab book/1gp/wk12

From 2012.igem.org

(Difference between revisions)
Line 134: Line 134:
<p>a = uninduced (- inducer)</p>
<p>a = uninduced (- inducer)</p>
<p>b = induced (+ inducer)</p>
<p>b = induced (+ inducer)</p>
-
 
+
<p> ------------------ </p>
 +
<p> Since OD600 = approximately 1.000, GFP fluorescence was then measured by aliquoting 200µL of each cultured conical flask to respective wells on a 96-well plate and then measuring fluorescence with settings: 480nm excitation, 530nm emission. The following measurements for GFP fluorescence were obtained:</p>
 +
<p>o 1a = 41285A.</p>
 +
<p>o 1b = 42191A.</p>
 +
<p>o 2a = 45381A.</p>
 +
<p>o 2b = 45462A.</p>
 +
<p>o 3a = 45220A.</p>
 +
<p>o 3b = 43045A.</p> 
 +
<p><i> Where 'A' is absorbance.</i></p>
 +
<p> There wasn't any conclusive evidence that GFP fluorescence was higher in the + induced GFP constructs than the - induced GFP constructs and GFP fluorescence remained similar to basal levels with - and + induced pLacI/Ara-1+RBS-WclY-terminator.</p>
<p><u><b>Wednesday 26th September (9.00)</u></b></p>
<p><u><b>Wednesday 26th September (9.00)</u></b></p>
-
<p>• <a href="http://www.fermentas.com/templates/files/tiny_mce/coa_pdf/coa_k0502.pdf" style="color:#1d1d1b"><u>Mini-Prepping</u></a> of OmpA</p>
+
<p>•</p>
-
<p>• Send off OmpA for sequencing</p>
+
-
<p>• <a href="https://2012.igem.org/Team:Exeter/lab_book/proto/1" style="color:#1d1d1b"><u>Transformation</u></a> of pBAD/AraC promoter weak+RBS-GFP, pBAD/AraC promoter strong+RBS-GFP, pBAD(large)+RBS-GFP, constitutive promoter+RBS-GFP, pLacI/Ara-1+RBS-GFP, WclY-pSB1C3, WbnJ-pSB1C3, WbbC-pSB1C3, WfcA-terminator and RBS-WbiP </p>
+

Revision as of 16:51, 25 September 2012

ExiGEM2012 Lab Book 1GP wk12

Single Gene Plasmids and Enzyme Characterisation: 24th - 28th September 2012

Monday 24th September (9.00)

Adding cultures with pBAD(weak)+RBS-GFP, pLacI/Ara-1+RBS-GFP and pLacI/Ara-1+RBS-WclY-terminator into liquid medium and incubation overnight

Uninduced and induced (L-arabinose for pBAD(weak) and IPTG for pLacI/Ara-1) tubes for each of the three constructs were added along with chloramphenicol (for pBAD(weak)+RBS-GFP and pLacI/Ara-1+RBS-GFP) and ampicillin (for pLacI/Ara-1+RBS-WclY-terminator) as the selection antibiotics. pLacI/Ara-1+RBS-WclY-terminator was used to determine basal levels of GFP fluorescence.

Tuesday 25th September (9.00)

• Measuring GFP fluorescence of pBAD(weak)+RBS-GFP and pLacI/Ara-1+RBS-GFP

Same method as followed for protein expression on Thursday 20th September, but 6 conical flasks were used for testing of pBAD(weak)+RBS-GFP and pLacI/Ara-1+RBS-GFP as well as determining basal levels for pLacI/Ara-1+RBS-WclY-terminator. However, 750µL was only transferred to cuvettes for measuring OD600 at 2 and a half hours after putting all 6 conical flasks in the shaking incubator. The results for OD600 measured is as follows:

o 1a = 0.134. | o 1a = 0.922.

o 1b = 0.162. | o 1b = 1.368.

o 2a = 0.149. | o 2a = 0.965.

o 2b = 0.144. | o 2b = 0.958.

o 3a = 0.155. | o 3a = 1.041.

o 3b = 0.137. | o 3b = 1.009.

At: 9:45 and 12:15 left to right respectively

------------------

1 = pLacI/Ara-1+RBS-WclY-terminator

2 = pLacI/Ara-1+RBS-GFP

3 = pBAD(weak)+RBS-GFP

------------------

a = uninduced (- inducer)

b = induced (+ inducer)

------------------

Since OD600 = approximately 1.000, GFP fluorescence was then measured by aliquoting 200µL of each cultured conical flask to respective wells on a 96-well plate and then measuring fluorescence with settings: 480nm excitation, 530nm emission. The following measurements for GFP fluorescence were obtained:

o 1a = 41285A.

o 1b = 42191A.

o 2a = 45381A.

o 2b = 45462A.

o 3a = 45220A.

o 3b = 43045A.

Where 'A' is absorbance.

There wasn't any conclusive evidence that GFP fluorescence was higher in the + induced GFP constructs than the - induced GFP constructs and GFP fluorescence remained similar to basal levels with - and + induced pLacI/Ara-1+RBS-WclY-terminator.

Wednesday 26th September (9.00)