Team:TU Darmstadt/Labjournal/Simulation

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(Simulation)
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# Computation of a [https://2012.igem.org/Team:TU_Darmstadt/Labjournal/Simulation/GNM gaussian network model] ([https://2012.igem.org/Team:TU_Darmstadt/Labjournal/Simulation/GNM GNM])
# Computation of a [https://2012.igem.org/Team:TU_Darmstadt/Labjournal/Simulation/GNM gaussian network model] ([https://2012.igem.org/Team:TU_Darmstadt/Labjournal/Simulation/GNM GNM])
# [https://2012.igem.org/Team:TU_Darmstadt/Protocols/Homology_Modelling Homology Modeling]
# [https://2012.igem.org/Team:TU_Darmstadt/Protocols/Homology_Modelling Homology Modeling]
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[https://2012.igem.org/Team:TU_Darmstadt/Protocols/Information_theory Information theory]
 

Revision as of 22:13, 23 September 2012

Simulation

This section of the labjournals features the simulations and modelling part. Due to the time-consuming nature of simulations involving software like Yasara or R (although this creatly depends on the available calculation capacity and the performed tasks) this documentation is split by tasks not time.

In order to characterize and enhance the informations available of the pursued enzymes of interest (for more information take a look at Project 1-3) the following simulations were employed.

  1. Computation of a gaussian network model (GNM)
  2. Homology Modeling