Team:Amsterdam/software/mdl2latex/
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= Introduction = | = Introduction = | ||
- | [http://www.stompy.sourceforge.net StochPy] is a versatile stochastic simulation package implemented in Python for the simulation of biochemical networks. Its inherits the easy to learn model description language [http://www.stompy.sourceforge.net/html/inputfile_doc.html MDL] from its parent package [http:// | + | [http://www.stompy.sourceforge.net StochPy] is a versatile stochastic simulation package implemented in Python for the simulation of biochemical networks. Its inherits the easy to learn model description language [http://www.stompy.sourceforge.net/html/inputfile_doc.html MDL] from its parent package [http://pysces.sourceforge.net/PySCeS PySCeS], which is a modelling environment with deterministic capabilities. By defining models in MDL and executing them through high-level commands in the Python or IPython shell, an easy-going experience is presented to the modeller in which one (almost) doesn’t need to worry about implementation details. |
[https://github.com/slagtermaarten/MDL2Latex MDL2LaTeX] is another step towards making a modeller’s life as carefree as possible. Exactly as its name implies: it converts MDL files to clean LaTeX representations, so the models can be easily integrated into reports. No more time wasted on tedious equation copying into LaTeX! | [https://github.com/slagtermaarten/MDL2Latex MDL2LaTeX] is another step towards making a modeller’s life as carefree as possible. Exactly as its name implies: it converts MDL files to clean LaTeX representations, so the models can be easily integrated into reports. No more time wasted on tedious equation copying into LaTeX! | ||
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= Installation = | = Installation = | ||
- | MLD2LaTeX has been tested in both Linux and Unix (Mac OS). For easy installation, first install [ | + | MLD2LaTeX has been tested in both Linux and Unix (Mac OS). For easy installation, first install [http://www.github.com git]. |
Then run: | Then run: |
Revision as of 18:12, 19 September 2012