Team:Amsterdam/maarten/
From 2012.igem.org
(Difference between revisions)
Line 5: | Line 5: | ||
function setup(){ | function setup(){ | ||
document.write('check') | document.write('check') | ||
- | + | $('#visualizationButtons').empty() | |
+ | $('#infovis').empty() | ||
+ | $('#readout').empty() | ||
+ | addForbiddenSequences() | ||
+ | sensors = document.plasmidForm.sensors.value.toLowerCase() | ||
+ | sensorArray = formatSensors(sensors) | ||
+ | promoters = formatPartsregistryPromoters() | ||
+ | sensorArray = promoters.concat(sensorArray) | ||
+ | tempArray = new Array() | ||
+ | j = 0 | ||
+ | number = 0 | ||
+ | targetSites = new Array() | ||
+ | for (sensor in sensorArray){ | ||
+ | tempArray[j] = sensorArray[sensor] | ||
+ | j++ | ||
+ | if (j%5 === 0 && j !== 0){ | ||
+ | configuratePlasmid(tempArray,number) | ||
+ | number++ | ||
+ | tempArray = new Array() | ||
+ | j = 0 | ||
+ | for (item in memoryPlasmid.memoryObjects){ | ||
+ | site = new Object() | ||
+ | site.zincFingerDescription = memoryPlasmid.memoryObjects[item].zincFinger.featureObject.description | ||
+ | site.zincFinger = memoryPlasmid.memoryObjects[item].zincFinger.featureObject.target | ||
+ | site.zincFingerLength = site.zincFinger.length | ||
+ | site.methyltransferaseDescription = memoryPlasmid.memoryObjects[item].methyltransferase.featureObject.description | ||
+ | site.methyltransferase = memoryPlasmid.memoryObjects[item].methyltransferase.featureObject.target | ||
+ | site.methyltransferaseLength = site.methyltransferase.length | ||
+ | site.sensor = memoryPlasmid.memoryObjects[item].sensor.description | ||
+ | targetSites.push(site) | ||
+ | } | ||
+ | } | ||
+ | } | ||
+ | if (j%5 !== 0){ | ||
+ | configuratePlasmid(tempArray,number) | ||
+ | for (item in memoryPlasmid.memoryObjects){ | ||
+ | site = new Object() | ||
+ | site.zincFingerDescription = memoryPlasmid.memoryObjects[item].zincFinger.featureObject.description | ||
+ | site.zincFinger = memoryPlasmid.memoryObjects[item].zincFinger.featureObject.target | ||
+ | site.zincFingerLength = site.zincFinger.length | ||
+ | site.methyltransferaseDescription = memoryPlasmid.memoryObjects[item].methyltransferase.featureObject.description | ||
+ | site.methyltransferase = memoryPlasmid.memoryObjects[item].methyltransferase.featureObject.target | ||
+ | site.methyltransferaseLength = site.methyltransferase.length | ||
+ | site.sensor = memoryPlasmid.memoryObjects[item].sensor.description | ||
+ | targetSites.push(site) | ||
+ | } | ||
+ | } | ||
+ | //genbankRestriction(targetSites) | ||
+ | json = createJSONRestriction(targetSites) | ||
+ | $('#visualizationButtons').append('<input type="hidden" name="json-1" value="'+escape(JSON.stringify(json))+'"/><input class="submit" type="submit" value="Restriction Plasmid" onclick="visualization(-1);return false"/>'); | ||
+ | $('#readout').append('<input type="textfield" name="readout" value=""/><input class="submit" type="submit" value="Submit" onClick="getReadout();return false"/>'); | ||
+ | |||
} | } | ||
</script> | </script> |
Revision as of 19:11, 3 September 2012