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Team:UC Chile2/Other
From 2012.igem.org
(Difference between revisions)
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RNAfold http://rna.tbi.univie.ac.at/cgi-bin/RNAfold.cgi | RNAfold http://rna.tbi.univie.ac.at/cgi-bin/RNAfold.cgi | ||
Ape http://en.bio-soft.net/plasmid/ApE.html | Ape http://en.bio-soft.net/plasmid/ApE.html | ||
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| + | 3DS Max (for 3d visualization) | ||
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| + | Protein modeling: | ||
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| + | -Rosetta | ||
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| + | -Foldit | ||
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| + | -MOE: to add hydrogen atoms. | ||
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| + | -Autodock: a suite of automated docking tools. This should be useful to evaluate the self-assembly of our monomers. | ||
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| + | -Force Field: to calculate potentials between particles. | ||
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| + | Protein visualization software: PyMOL, VMD, Chimera. | ||
Revision as of 03:53, 16 August 2012
RNAfold http://rna.tbi.univie.ac.at/cgi-bin/RNAfold.cgi
Ape http://en.bio-soft.net/plasmid/ApE.html
3DS Max (for 3d visualization)
Protein modeling:
-Rosetta
-Foldit
-MOE: to add hydrogen atoms.
-Autodock: a suite of automated docking tools. This should be useful to evaluate the self-assembly of our monomers.
-Force Field: to calculate potentials between particles.
Protein visualization software: PyMOL, VMD, Chimera.
