Team:St Andrews/Procedure

From 2012.igem.org

(Difference between revisions)
Line 43: Line 43:
     <div class="tab-pane" id="tab2">
     <div class="tab-pane" id="tab2">
       <p>Start from lipid extraction</p>
       <p>Start from lipid extraction</p>
-
       <p>sequence accordions, primers, sequence results</p>
+
       <p>primers, sequence results</p>
 +
 
 +
div class="btn-group">
 +
  <a class="btn dropdown-toggle" data-toggle="dropdown" href="#">
 +
    Δ12 T. Cruzi
 +
    <span class="caret"></span>
 +
  </a>
 +
  <ul class="dropdown-menu">
 +
    atgtcgcgggttgacaatttaactgtcgcgccgggtccaccggatgtcatgaaggcggtg
 +
cttaagtctgggcgcaacaaggagcacaatgtcattgtgccttcctccgcactgaccatt
 +
ggagaaattcaggagaaaatcccggtaaagtactttgaacgcaacactacccggagcgtc
 +
atgtttcttttacgcgacctcgcacaggtggcgttgacgtacgccattatgtacgccgtc
 +
gccttgccacttgccacttccatggaagtttctgcagcaagaacgttggccgacggtggg
 +
gtgttatcattgatggcaggtacagccatgacgacagcggcgtggcttttaaaggcagtg
 +
ttgtgggcggtgttttggtttgtacagggacttaacggcactgcgctttgggtcctggct
 +
cacgaatgcggccatcaggcgttcagccccatgaaaggtttgaatgacgccgttggcatg
 +
attttgcactctgcgctgctcgtgccgtaccacagctggcgcatcacccacggcggccac
 +
cacaaacacacgaatcacctcacgaaggatcttgtgtttgttccagacaaacgaaacgcg
 +
gttgtggagctcgtggaggaggcgccgctggtgttattaattcaattattgctgattttt
 +
ctctttggttggccggcacatcttctttttaatgcctctggacaggaatttggccgactc
 +
gcgagccactttgaccccggcgctccatttttccgcagcgaagaccgtcacgatattgtc
 +
ctgtcgaatgttgggattgtcagcgcgttatttgtcattttctccagcgtttaccgcttt
 +
ggttttacaaatgttttctgctggtacattgtaccgtacctctgggtgaacttttggctt
 +
gtgtacattacatacctgcagcacacggatatacgcattcctcactacacacatgagcac
 +
tggacgtttgttcgcggtgcattggcggctgtggacagggactacggctttgtccttaac
 +
acatggctccatcacatcaatgattcccacgtggtacatcacctctttagcaaaatgcca
 +
cactacaacgcaatccaggtgacaagaaagtacattcgtgagatactgggtgccacatac
 +
attacggatgagaggtcactgtggaagatgctctgggaacagcgtagagagtgccgctat
 +
gttgttcccgcagagggcgtctgtgtctttcatgggtaa
 +
  </ul>
 +
</div>
 +
 
 +
 
 +
<h4>Sequences</h4>
 +
iv class="btn-group">
 +
  <a class="btn dropdown-toggle" data-toggle="dropdown" href="#">
 +
    Δ12 Synechocystis
 +
    <span class="caret"></span>
 +
  </a>
 +
  <ul class="dropdown-menu">
 +
  atgactgccacgattcccccgttgacaccaacggtaacgcccagcaatcccgatcgcccg
 +
attgcggatctcaaactacaagacatcattaaaaccctgcccaaggaatgcttcgagaaa
 +
aaagcgagcaaagcctgggcttctgttttgattaccctaggggcgatcgccgtgggctat
 +
ttgggcattatttatctgccctggtactgcttgcccattacctggatctggacagggaca
 +
gccttaacgggggccttcgttgtcggccatgactgtggccatcgctcctttgctaaaaaa
 +
cgctgggtcaatgatttagtgggacatatcgcttttgctcccctcatctaccctttccat
 +
agctggcgcctactccacgaccaccatcacctccacaccaacaaaattgaggttgataac
 +
gcctgggatccctggagtgtggaagctttccaagccagcccggcgatcgtccggcttttt
 +
tatcgggccatccggggtcccttctggtggactggttccattttccattggagcttaatg
 +
cacttcaaactttccaactttgcccaaagggaccgcaataaagtcaaattatccattgcc
 +
gttgtcttcctgtttgcggcgatcgcctttcctgccctaattatcaccacaggggtgtgg
 +
ggtttcgtcaaattttggctaatgccctggttggtgtatcacttttggatgagcactttt
 +
accattgtgcaccacaccattcccgaaattcgtttccgtcccgccgccgattggagtgcc
 +
gccgaagcccagttaaatggtactgttcactgcgattatccccgttgggtggaagtgctc
 +
tgccatgacatcaacgtccatattccccaccacctctccgttgccatcccttcctataac
 +
ctacgactagcccacggaagtttaaaagaaaactggggaccttttctttacgagcgcacc
 +
tttaactggcaattaatgcaacaaattagtgggcaatgtcatttatatgaccccgaacat
 +
ggctaccgcaccttcggctccctgaaaaaagtttaa
 +
  </ul>
 +
</div>
 +
 
 +
iv class="btn-group">
 +
  <a class="btn dropdown-toggle" data-toggle="dropdown" href="#">
 +
    Δ15 Synechocystis
 +
    <span class="caret"></span>
 +
  </a>
 +
  <ul class="dropdown-menu">
 +
    gtgcgtctagaaatttcatcgcctcaaacaaagcttccttaccccaaaactgaagaatta
 +
ccatttaccctccaagagctcagaaacgctattccagcggattgttttgagccatcggta
 +
gtccggtccttgggctacttttttttggatgttggtttaattgccgggttttatgctcta
 +
gcggcctaccttgattcctggttcttctatccgattttttggttaattcagggaacccta
 +
ttctggtccctgtttgtggtgggccatgattgtggccatggctccttttccaaatccaaa
 +
acccttaataattggattggtcatctcagccacacgccaattttggtgccttaccatggc
 +
tggcgtattagtcatcgtactcaccatgccaacacgggcaatatcgacaccgacgaaagt
 +
tggtatccagtgtcggagcaaaaatataaccaaatggcctggtatgaaaaacttctacgt
 +
ttttacttgcctctgatcgcctaccccatttatctatttcggcgatcgccaaaccggcaa
 +
ggctcccatttcatgcccggcagtcccctattccgtcccggagaaaaagcagctgttctc
 +
accagcacctttgcccttgcagcctttgtcggcttccttggctttttaacttggcaattt
 +
ggctggctatttttgctgaaattttatgttgccccctacctcgtgtttgtggtgtggtta
 +
gatttggtcacatttttacatcacactgaagacaatatcccttggtatcgtggtgatgac
 +
tggtattttctcaaaggtgccctctccaccattgatcgggattacggcttcattaacccc
 +
attcaccatgacattggcacccacgtcgcccaccatattttctcgaatatgccccactac
 +
aagttacgccgggcgactgaagccatcaagcccattttaggggaatattatcgatattct
 +
gacgagccaatttggcaagctttttttaagtcctactgggcttgccattttgttcctaat
 +
caaggttcaggggtctattaccaatccccatccaatggtggatatcaaaagaaaccttaa
 +
  </ul>
 +
</div>
 +
 
 +
iv class="btn-group">
 +
  <a class="btn dropdown-toggle" data-toggle="dropdown" href="#">
 +
    Δ6 Synechocystis
 +
    <span class="caret"></span>
 +
  </a>
 +
  <ul class="dropdown-menu">
 +
    atgctaacagcggaaagaattaaatttacccagaaacgggggtttcgtcgggtactaaac
 +
caacgggtggatgcctactttgccgagcatggcctgacccaaagggataatccctccatg
 +
tatctgaaaaccctgattattgtgctctggttgttttccgcttgggcctttgtgcttttt
 +
gctccagttatttttccggtgcgcctactgggttgtatggttttggcgatcgccttggcg
 +
gccttttccttcaatgtcggccacgatgccaaccacaatgcctattcctccaatccccac
 +
atcaaccgggttctgggcatgacctacgattttgtcgggttatctagttttctttggcgc
 +
tatcgccacaactatttgcaccacacctacaccaatattcttggccatgacgtggaaatc
 +
catggagatggcgcagtacgtatgagtcctgaacaagaacatgttggtatttatcgtttc
 +
cagcaattttatatttggggtttatatcttttcattcccttttattggtttctctacgat
 +
gtctacctagtgcttaataaaggcaaatatcacgaccataaaattcctcctttccagccc
 +
ctagaattagctagtttgctagggattaagctattatggctcggctacgttttcggctta
 +
cctctggctctgggcttttccattcctgaagtattaattggtgcttcggtaacctatatg
 +
acctatggcatcgtggtttgcaccatctttatgctggcccatgtgttggaatcaactgaa
 +
tttctcacccccgatggtgaatccggtgccattgatgacgagtgggctatttgccaaatt
 +
cgtaccacggccaattttgccaccaataatcccttttggaactggttttgtggcggttta
 +
aatcaccaagttacccaccatcttttccccaatatttgtcatattcactatccccaattg
 +
gaaaatattattaaggatgtttgccaagagtttggtgtggaatataaagtttatcccacc
 +
ttcaaagcggcgatcgcctctaactatcgctggctagaggccatgggcaaagcatcgtga
 +
 
 +
  </ul>
 +
</div>
 +
 
 +
iv class="btn-group">
 +
  <a class="btn dropdown-toggle" data-toggle="dropdown" href="#">
 +
    ELO 6 L. major
 +
    <span class="caret"></span>
 +
  </a>
 +
  <ul class="dropdown-menu">
 +
    atgaaggtcatcgtcgcttctggcccggacggtgcccgcaagcacgaggtggagctggca
 +
gccaacgccacgctcgcagatctgaagaaggcctaccaacggggtgtggacgtgcaccgc
 +
aagtcgttcaaggttcccagcgcggagtcgccgctgccaggtgcggatagtggcaagctg
 +
cgcccgaacctcattactctgtcagataaggtgcccctgtcgcagcagggggtgaaggat
 +
ggctcggtgatcacttacaaggacctcggcccgcagatcggctaccgcacggtgttctac
 +
gtcgagtatgccggccccatcgccttcatgctgctgtacgccatgcgcccttcgctcatc
 +
tacggctctgccccgatgccggcttacggctacacgcagaagctatacattggcctcttc
 +
ctcgcccacttcttaaagcgcgagctcgagtccatgtttgtgcacaagttctcgcaccca
 +
acgatgccgatgcgcaacatcttcaagaactgcatctactactggtccttcgccgccttc
 +
atcggctacgtgctgtgcagtccttcattcacgccgaccagcaccatgcagtcaaacttc
 +
ggcgccgtggtcatggtcatcaacgagctgctgaacttcgcggtgcactaccagcttagc
 +
acgatgcgcaagtccgatggtgacaccacccgcaacgtgccgcaaggccctctgttcgcc
 +
ttcgtctcgtgcccgaactacttctttgagattatgtcgtgggtgtccttttccatcggc
 +
acaaatatgttatcctcctggttcttcacactcgccggtttcgtgcagatggcggactgg
 +
gcgaagaagaagcaccggggctacgtcaaggcggacccggccaataaaaagaaggccgcc
 +
attctgcccttcatcatgtag
 +
  </ul>
 +
</div>
 +
 
       <dl class="dl-horizontal">   
       <dl class="dl-horizontal">   
         <dt>date</dt>   
         <dt>date</dt>   

Revision as of 10:17, 25 July 2012

St Andrews iGEM '12

Lab Book

Procedure

anyone really keen to write this up, up to protein visualization? Don't forget to mention the differing restriction enzymes and vectors of each team. I can add in links to the protocols page.

Please also refer to our Protocols page.

Start from lipid extraction

primers, sequence results

div class="btn-group"> Δ12 T. Cruzi
    atgtcgcgggttgacaatttaactgtcgcgccgggtccaccggatgtcatgaaggcggtg cttaagtctgggcgcaacaaggagcacaatgtcattgtgccttcctccgcactgaccatt ggagaaattcaggagaaaatcccggtaaagtactttgaacgcaacactacccggagcgtc atgtttcttttacgcgacctcgcacaggtggcgttgacgtacgccattatgtacgccgtc gccttgccacttgccacttccatggaagtttctgcagcaagaacgttggccgacggtggg gtgttatcattgatggcaggtacagccatgacgacagcggcgtggcttttaaaggcagtg ttgtgggcggtgttttggtttgtacagggacttaacggcactgcgctttgggtcctggct cacgaatgcggccatcaggcgttcagccccatgaaaggtttgaatgacgccgttggcatg attttgcactctgcgctgctcgtgccgtaccacagctggcgcatcacccacggcggccac cacaaacacacgaatcacctcacgaaggatcttgtgtttgttccagacaaacgaaacgcg gttgtggagctcgtggaggaggcgccgctggtgttattaattcaattattgctgattttt ctctttggttggccggcacatcttctttttaatgcctctggacaggaatttggccgactc gcgagccactttgaccccggcgctccatttttccgcagcgaagaccgtcacgatattgtc ctgtcgaatgttgggattgtcagcgcgttatttgtcattttctccagcgtttaccgcttt ggttttacaaatgttttctgctggtacattgtaccgtacctctgggtgaacttttggctt gtgtacattacatacctgcagcacacggatatacgcattcctcactacacacatgagcac tggacgtttgttcgcggtgcattggcggctgtggacagggactacggctttgtccttaac acatggctccatcacatcaatgattcccacgtggtacatcacctctttagcaaaatgcca cactacaacgcaatccaggtgacaagaaagtacattcgtgagatactgggtgccacatac attacggatgagaggtcactgtggaagatgctctgggaacagcgtagagagtgccgctat gttgttcccgcagagggcgtctgtgtctttcatgggtaa

Sequences

iv class="btn-group"> Δ12 Synechocystis
    atgactgccacgattcccccgttgacaccaacggtaacgcccagcaatcccgatcgcccg attgcggatctcaaactacaagacatcattaaaaccctgcccaaggaatgcttcgagaaa aaagcgagcaaagcctgggcttctgttttgattaccctaggggcgatcgccgtgggctat ttgggcattatttatctgccctggtactgcttgcccattacctggatctggacagggaca gccttaacgggggccttcgttgtcggccatgactgtggccatcgctcctttgctaaaaaa cgctgggtcaatgatttagtgggacatatcgcttttgctcccctcatctaccctttccat agctggcgcctactccacgaccaccatcacctccacaccaacaaaattgaggttgataac gcctgggatccctggagtgtggaagctttccaagccagcccggcgatcgtccggcttttt tatcgggccatccggggtcccttctggtggactggttccattttccattggagcttaatg cacttcaaactttccaactttgcccaaagggaccgcaataaagtcaaattatccattgcc gttgtcttcctgtttgcggcgatcgcctttcctgccctaattatcaccacaggggtgtgg ggtttcgtcaaattttggctaatgccctggttggtgtatcacttttggatgagcactttt accattgtgcaccacaccattcccgaaattcgtttccgtcccgccgccgattggagtgcc gccgaagcccagttaaatggtactgttcactgcgattatccccgttgggtggaagtgctc tgccatgacatcaacgtccatattccccaccacctctccgttgccatcccttcctataac ctacgactagcccacggaagtttaaaagaaaactggggaccttttctttacgagcgcacc tttaactggcaattaatgcaacaaattagtgggcaatgtcatttatatgaccccgaacat ggctaccgcaccttcggctccctgaaaaaagtttaa
iv class="btn-group"> Δ15 Synechocystis
    gtgcgtctagaaatttcatcgcctcaaacaaagcttccttaccccaaaactgaagaatta ccatttaccctccaagagctcagaaacgctattccagcggattgttttgagccatcggta gtccggtccttgggctacttttttttggatgttggtttaattgccgggttttatgctcta gcggcctaccttgattcctggttcttctatccgattttttggttaattcagggaacccta ttctggtccctgtttgtggtgggccatgattgtggccatggctccttttccaaatccaaa acccttaataattggattggtcatctcagccacacgccaattttggtgccttaccatggc tggcgtattagtcatcgtactcaccatgccaacacgggcaatatcgacaccgacgaaagt tggtatccagtgtcggagcaaaaatataaccaaatggcctggtatgaaaaacttctacgt ttttacttgcctctgatcgcctaccccatttatctatttcggcgatcgccaaaccggcaa ggctcccatttcatgcccggcagtcccctattccgtcccggagaaaaagcagctgttctc accagcacctttgcccttgcagcctttgtcggcttccttggctttttaacttggcaattt ggctggctatttttgctgaaattttatgttgccccctacctcgtgtttgtggtgtggtta gatttggtcacatttttacatcacactgaagacaatatcccttggtatcgtggtgatgac tggtattttctcaaaggtgccctctccaccattgatcgggattacggcttcattaacccc attcaccatgacattggcacccacgtcgcccaccatattttctcgaatatgccccactac aagttacgccgggcgactgaagccatcaagcccattttaggggaatattatcgatattct gacgagccaatttggcaagctttttttaagtcctactgggcttgccattttgttcctaat caaggttcaggggtctattaccaatccccatccaatggtggatatcaaaagaaaccttaa
iv class="btn-group"> Δ6 Synechocystis
    atgctaacagcggaaagaattaaatttacccagaaacgggggtttcgtcgggtactaaac caacgggtggatgcctactttgccgagcatggcctgacccaaagggataatccctccatg tatctgaaaaccctgattattgtgctctggttgttttccgcttgggcctttgtgcttttt gctccagttatttttccggtgcgcctactgggttgtatggttttggcgatcgccttggcg gccttttccttcaatgtcggccacgatgccaaccacaatgcctattcctccaatccccac atcaaccgggttctgggcatgacctacgattttgtcgggttatctagttttctttggcgc tatcgccacaactatttgcaccacacctacaccaatattcttggccatgacgtggaaatc catggagatggcgcagtacgtatgagtcctgaacaagaacatgttggtatttatcgtttc cagcaattttatatttggggtttatatcttttcattcccttttattggtttctctacgat gtctacctagtgcttaataaaggcaaatatcacgaccataaaattcctcctttccagccc ctagaattagctagtttgctagggattaagctattatggctcggctacgttttcggctta cctctggctctgggcttttccattcctgaagtattaattggtgcttcggtaacctatatg acctatggcatcgtggtttgcaccatctttatgctggcccatgtgttggaatcaactgaa tttctcacccccgatggtgaatccggtgccattgatgacgagtgggctatttgccaaatt cgtaccacggccaattttgccaccaataatcccttttggaactggttttgtggcggttta aatcaccaagttacccaccatcttttccccaatatttgtcatattcactatccccaattg gaaaatattattaaggatgtttgccaagagtttggtgtggaatataaagtttatcccacc ttcaaagcggcgatcgcctctaactatcgctggctagaggccatgggcaaagcatcgtga
iv class="btn-group"> ELO 6 L. major
    atgaaggtcatcgtcgcttctggcccggacggtgcccgcaagcacgaggtggagctggca gccaacgccacgctcgcagatctgaagaaggcctaccaacggggtgtggacgtgcaccgc aagtcgttcaaggttcccagcgcggagtcgccgctgccaggtgcggatagtggcaagctg cgcccgaacctcattactctgtcagataaggtgcccctgtcgcagcagggggtgaaggat ggctcggtgatcacttacaaggacctcggcccgcagatcggctaccgcacggtgttctac gtcgagtatgccggccccatcgccttcatgctgctgtacgccatgcgcccttcgctcatc tacggctctgccccgatgccggcttacggctacacgcagaagctatacattggcctcttc ctcgcccacttcttaaagcgcgagctcgagtccatgtttgtgcacaagttctcgcaccca acgatgccgatgcgcaacatcttcaagaactgcatctactactggtccttcgccgccttc atcggctacgtgctgtgcagtccttcattcacgccgaccagcaccatgcagtcaaacttc ggcgccgtggtcatggtcatcaacgagctgctgaacttcgcggtgcactaccagcttagc acgatgcgcaagtccgatggtgacaccacccgcaacgtgccgcaaggccctctgttcgcc ttcgtctcgtgcccgaactacttctttgagattatgtcgtgggtgtccttttccatcggc acaaatatgttatcctcctggttcttcacactcgccggtttcgtgcagatggcggactgg gcgaagaagaagcaccggggctacgtcaaggcggacccggccaataaaaagaaggccgcc attctgcccttcatcatgtag
date
what we did

who knows what those Metal Mickies are up to. Eating nachos in the Whey Pat most likely.

Retrieved from "http://2012.igem.org/Team:St_Andrews/Procedure"