Team:Exeter/lab book/glyco/wk7

From 2012.igem.org

(Difference between revisions)
(Created page with "{{Template:Team:Exeter/e-candi_banner}} <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> ...")
 
(13 intermediate revisions not shown)
Line 5: Line 5:
<head>
<head>
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-
   <title>ExiGEM2012 Lab Book Glyco wk7</title>
+
   <title>ExiGEM2012 Lab Book Glyco wk5</title>
</head>
</head>
<body>
<body>
-
  <table width="1075" border="0" cellpadding="10">
+
  <table width="980" border="0" cellpadding="10">
   
   
  <!--Spacer for Menu Banner-->
  <!--Spacer for Menu Banner-->
Line 20: Line 20:
   <td colspan="2">
   <td colspan="2">
     <div style="text-align:center">
     <div style="text-align:center">
-
     <font face="DokChampa" color="#57b947" size="3">
+
     <font face="Verdana" color="#57b947" size="2">
        
        
-
      <!--Project Division Links-->
+
    <!--Project Division Links-->
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/proto"; style="color:#57b947">Protocols</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Novel Polysaccharide Production</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Gibson Assembly</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Showcasing Polysaccharide Production</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
-
        <p>
+
      <p>  
-
       <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Operon Construction</a>     
-
        </p>
+
       &nbsp;|&nbsp;
 +
      <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
 +
      </p>
 +
    <!--End Project Division Links-->
 +
 
-
      <!--End Project Division Links-->
 
-
   
 
     </font>
     </font>
     </div>
     </div>
   </td>
   </td>
-
    
+
   </tr>
 +
 
   <tr>
   <tr>
     <td rowspan="2" valign="top" align="center" width="170">
     <td rowspan="2" valign="top" align="center" width="170">
Line 45: Line 48:
     <!--Project Division Week Hyperlinks-->
     <!--Project Division Week Hyperlinks-->
     <div style="text-align:center; width:170">
     <div style="text-align:center; width:170">
-
       <font face="DokChampa" color="#1d1d1b" size="3">
+
       <font face="Verdana" color="#1d1d1b" size="2">
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#1d1d1b">9th - 13th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#1d1d1b">25th - 29th June</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk2"; style="color:#1d1d1b">16th - 20th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk2"; style="color:#1d1d1b">2nd - 6th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk3"; style="color:#1d1d1b">23rd - 27th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk3"; style="color:#1d1d1b">9th - 13th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk4"; style="color:#1d1d1b">30th July - 3rd August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk4"; style="color:#1d1d1b">16th - 20th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk5"; style="color:#1d1d1b">6th - 10th August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk5"; style="color:#1d1d1b">23rd - 27th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk6"; style="color:#1d1d1b">13th - 24th August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk6"; style="color:#1d1d1b">30th July - 3rd August</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk7"; style="color:#1d1d1b">27th - 31st August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk7"; style="color:#1d1d1b">6th - 10th August</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk8"; style="color:#1d1d1b">10th - 14th September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk9"; style="color:#1d1d1b">17th - 21st September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk10"; style="color:#1d1d1b">24th - 28th September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/Results/GlycoBase"; style="color:#e30614"><b>The Database: <font size="3">GlycoBase</font></b></a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="http://glycoweb.com/"; style="color:#e30614" target="_blank"><b>The Result: <font size="3">GlycoWeb</font></b></font></a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="http://sourceforge.net/projects/exe2012ecandi/"; style="color:#e30614" target="_blank"><b><font size="3">Source Code</font></b></font></a>
       </font>
       </font>
     </div>
     </div>
Line 79: Line 106:
   <td width="850" height="250">
   <td width="850" height="250">
   <!------------INSERT WEEKLY IMAGE HERE------------>
   <!------------INSERT WEEKLY IMAGE HERE------------>
-
     <img src="" alt="" title="" width="850" height="250">
+
     <img src="https://static.igem.org/mediawiki/2012/d/d3/Exe2012_lab7.jpg" alt="" title="" width="850" height="250">
   </td>
   </td>
   </tr>
   </tr>
Line 86: Line 113:
   <td valign="top" width="850">
   <td valign="top" width="850">
     <div style="text-align:justify">
     <div style="text-align:justify">
-
     <font face="DokChampa" color="#1d1d1b" size="2">
+
     <font face="Verdana" color="#1d1d1b" size="2">
      
      
-
       <font face="DokChampa" color="#57b947" size="4">
+
       <font face="Verdana" color="#57b947" size="4">
-
       <p><b><u>Glycobase: 27th - 31st August 2012</u></b></p>
+
       <p><b><u>Glycobase: 6th - 10th August 2012</u></b></p>
       </font>
       </font>
-
     <!------------ENTER LAB BOOK HERE: PLEASE INCLUDE DATES WITHIN THE WEEK------------>  
+
     <p><b>07/08/12</b></p>
-
      
+
<p><i>Web4.py Design</i></p>
 +
<p>Completed a design for the web page interface. Begins with home page offering the user several options with @route('/home')</p>
 +
<p>Then a page where the user can create their own polysaccharide by entering the sugar units making up the repeat unit and clicking the button 'fetch enzymes', @route('/build').</p>
 +
<p>Random chain page where the user can create their own random polysaccharide by specifying the chain length, @route('/random').</p>
 +
<p>Page for adding an enzyme to Glycobase. The user is asked for the enzyme name, acceptor sugar, donor sugar and whether it is characterized, @route('/Add_Enzyme').</p>
 +
<p>After submitting the enzyme there is a completion page, @route('/Add_Enzyme/submit').</p>
 +
<p>Help page, @route('/help').</p>
 +
<p>Some routes could be dynamic.</p>
 +
 
 +
     <p><b>08/08/12</b></p>
 +
<p>First HTML styling for GlycoWeb completed and buttons created for navigation.<p>
 +
    <p><b>10/08/12</b></p>
 +
<p><i>Running GlycoWeb on another server</i></p>
 +
<p>Bottle has various adapters to multi-threaded servers on board.</p>
 +
 
     </font>
     </font>
     </div>
     </div>
Line 100: Line 141:
   
   
  </table>
  </table>
 +
 +
<table width="980" align="center" cellspacing="20">
 +
<tr align="center">
 +
  <td>
 +
  <font color="#57B947" size="1" face="Verdana">
 +
    <p><u>Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley</u> &nbsp;&nbsp;|&nbsp;&nbsp;
 +
    <a href="https://igem.org/Team.cgi?id=764" style="color:#57B947" target="_blank"><u>Contact Us</u></a>  &nbsp;&nbsp;|&nbsp;&nbsp;
 +
    <a href="https://2012.igem.org/Team:Exeter/site_map" style="color:#57B947"><u>Site Map</u></a></p>
 +
  </font>
 +
  </td>
 +
</tr>
 +
</table>
</body>
</body>
</html>
</html>

Latest revision as of 00:27, 27 September 2012

ExiGEM2012 Lab Book Glyco wk5

Glycobase: 6th - 10th August 2012

07/08/12

Web4.py Design

Completed a design for the web page interface. Begins with home page offering the user several options with @route('/home')

Then a page where the user can create their own polysaccharide by entering the sugar units making up the repeat unit and clicking the button 'fetch enzymes', @route('/build').

Random chain page where the user can create their own random polysaccharide by specifying the chain length, @route('/random').

Page for adding an enzyme to Glycobase. The user is asked for the enzyme name, acceptor sugar, donor sugar and whether it is characterized, @route('/Add_Enzyme').

After submitting the enzyme there is a completion page, @route('/Add_Enzyme/submit').

Help page, @route('/help').

Some routes could be dynamic.

08/08/12

First HTML styling for GlycoWeb completed and buttons created for navigation.

10/08/12

Running GlycoWeb on another server

Bottle has various adapters to multi-threaded servers on board.

Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley   |   Contact Us   |   Site Map

Retrieved from "http://2012.igem.org/Team:Exeter/lab_book/glyco/wk7"