Team:Paris-Saclay/Project

From 2012.igem.org

(Difference between revisions)
(Project Details)
 
(13 intermediate revisions not shown)
Line 1: Line 1:
-
<!-- *** What falls between these lines is the Alert Box!  You can remove it from your pages once you have read and understood the alert *** -->
+
<div id="large-single-paris-saclay">
-
 
+
{{Team:Paris-Saclay/Header}}
 +
<div id="single-paris-saclay">
 +
{{Team:Paris-Saclay/Menu}}
 +
<div id="single-left-column">
<html>
<html>
-
<div id="box" style="width: 700px; margin-left: 137px; padding: 5px; border: 3px solid #000; background-color: #fe2b33;">
+
<head>
-
<div id="template" style="text-align: center; font-weight: bold; font-size: large; color: #f6f6f6; padding: 5px;">
+
<script type="text/javascript" src='/Team:Paris-Saclay/jquery.min.js?action=raw&ctype=text/javascript'></script>
-
This is a template page. READ THESE INSTRUCTIONS.
+
<script type="text/javascript" src='/Team:Paris-Saclay/MetroJs.js?action=raw&ctype=text/javascript'></script>
 +
</head>
 +
<body>
 +
<div id="single-tile2" class="red live-tile" data-mode="flip" data-delay="4000">
 +
        <div id="tiles">
 +
<div class="child-tile"><p class="child-tile">GEMOTE</p></div>
 +
            <img src="http://www.igem-paris-saclay.u-psud.fr/wordpress/wp-content/uploads/2012/07/Aud.jpg" alt="" />
 +
</div>
 +
<div>
 +
<img src="http://www.ecole-adn.fr/uploads/2011/09/Probiotics-300x300.jpg" alt="" />
 +
<div class="child-tile"><p class="child-tile">GEMOTE</p></div>
 +
</div>
 +
<script type="text/javascript">
 +
    // apply regular slide universally unless .exclude class is applied
 +
    // NOTE: The default options for each liveTile are being pulled from the 'data-' attributes
 +
    $(".live-tile, .flip-list").not(".exclude").liveTile();
 +
</script>
</div>
</div>
-
<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #f6f6f6; padding: 5px;">
+
</body>
-
You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2008.igem.org/Help:Template/Examples">HERE</a>.
+
</html>
 +
{{Team:Paris-Saclay/left-column}}
</div>
</div>
-
<div id="warning" style="text-align: center; font-weight: bold; font-size: small; color: #f6f6f6; padding: 5px;">
+
<div id="content-paris-saclay">
-
You <strong>MUST</strong> have all of the pages listed in the menu below with the names specified. PLEASE keep all of your pages within your teams namespace.
+
{{Team:Paris-Saclay/Follow}}
 +
We designed a system that allows controlling the expression of a gene or an operon over a specific temperature interval (between 32 and 42 degrees Celsius). This system consists of an RNA thermometer controlling the translation of a thermosensitive transcriptional repressor, which itself controls the expression of the targeted gene or operon. In our current construction, the crtEBI operon directing lycopene biosynthesis is used as a reporter, allowing us to check our system's performance.<br />
 +
However, the possible applications of this system are extremely numerous. For example, controlling the expression of a toxin would allow creating a “suicidal bacterium” that would bring on its own death outside the specified temperature range. This will help preventing its spread in the environment.<br />
 +
And this is just one example... The only limit is our imagination !<br />
 +
 
 +
<h2>The GEMOTE Project:</h2>
 +
 
 +
At first, the idea was to create a nail polisher that could change color along with the temperature. But we soon understood this idea could have unwanted secondary effects, as fingers often come in contact with their owner's face and mouth. We cannot anticipate the result of the ingestion of organisms we would have created. We therefore decided to modify the bacteria so that they would change color if the experiment’s environment was out of norms. These bacteria would let us see if the temperature stayed within the right range. But on the long run, they could be modified to have effects other than changing color. For example, a bacterium could produce toxins which would cause its own death if the experimental conditions were not enforced. This could slow down or even completely halt the spread of the bacteria if they were accidentally released.
 +
{{Team:Paris-Saclay/Follow}}
</div>
</div>
</div>
</div>
-
</html>
+
</div>
-
 
+
{{Team:Paris-Saclay/Footer}}
-
<!-- *** End of the alert box *** -->
+
-
 
+
-
 
+
-
{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center"
+
-
!align="center"|[[Team:Paris-Saclay|Home]]
+
-
!align="center"|[[Team:Paris-Saclay/Team|Team]]
+
-
!align="center"|[https://igem.org/Team.cgi?year=2012&team_name=Paris-Saclay Official Team Profile]
+
-
!align="center"|[[Team:Paris-Saclay/Project|Project]]
+
-
!align="center"|[[Team:Paris-Saclay/Parts|Parts Submitted to the Registry]]
+
-
!align="center"|[[Team:Paris-Saclay/Modeling|Modeling]]
+
-
!align="center"|[[Team:Paris-Saclay/Notebook|Notebook]]
+
-
!align="center"|[[Team:Paris-Saclay/Safety|Safety]]
+
-
!align="center"|[[Team:Paris-Saclay/Attributions|Attributions]]
+
-
|}
+
-
 
+
-
 
+
-
 
+
-
 
+
-
== '''Overall project''' ==
+
-
 
+
-
The iGEM Paris-Saclay team has started to develop two projects this year.
+
-
 
+
-
For the first project, we are trying to create a bacteria capable of informing scientists about the current environmental conditions. For example, when the temperature drops or increases in excess, the bacteria would produce a colored compound. To obtain this result, we will use RNA thermometers, which are molecules that are capable of changing their conformation depending on the temperature. This allows us to regulate the synthesis of certain proteins. If the temperature sensing system works well, we want to create similar systems with different colors for other parameters, such as pH or oxygenation. The goal of this project would be to obtain a strain capable of telling an experimentalist if the cultures standard conditions were not met and therefore monitor the smooth running of an experiment.
+
-
 
+
-
The second project consists in developping a bacterian photographic film. This would be done by using proteins called rhodopsins, which can be activated with a specific electromagnetic wave. After mutagenesis of these proteins, we will try to obtain rhodopsins capable of being activated at different lenghtwaves. Then we will attempt to link this system to the production of fluorescent proteins of different colors. Ultimately, the system will be able to reproduce an image on a bacterian film, thanks to rhodopsins activated at different wavelengths.
+
-
 
+
-
We will keep you informed on the status of our two projects !
+
-
 
+
-
== Project Details==
+
-
 
+
-
== Results ==
+

Latest revision as of 17:58, 26 September 2012

GEMOTE

GEMOTE

Follow us !

We designed a system that allows controlling the expression of a gene or an operon over a specific temperature interval (between 32 and 42 degrees Celsius). This system consists of an RNA thermometer controlling the translation of a thermosensitive transcriptional repressor, which itself controls the expression of the targeted gene or operon. In our current construction, the crtEBI operon directing lycopene biosynthesis is used as a reporter, allowing us to check our system's performance.
However, the possible applications of this system are extremely numerous. For example, controlling the expression of a toxin would allow creating a “suicidal bacterium” that would bring on its own death outside the specified temperature range. This will help preventing its spread in the environment.
And this is just one example... The only limit is our imagination !

The GEMOTE Project:

At first, the idea was to create a nail polisher that could change color along with the temperature. But we soon understood this idea could have unwanted secondary effects, as fingers often come in contact with their owner's face and mouth. We cannot anticipate the result of the ingestion of organisms we would have created. We therefore decided to modify the bacteria so that they would change color if the experiment’s environment was out of norms. These bacteria would let us see if the temperature stayed within the right range. But on the long run, they could be modified to have effects other than changing color. For example, a bacterium could produce toxins which would cause its own death if the experimental conditions were not enforced. This could slow down or even completely halt the spread of the bacteria if they were accidentally released.