Team:Penn State/Modeling

From 2012.igem.org

(Difference between revisions)
 
(11 intermediate revisions not shown)
Line 159: Line 159:
}
}
-
#desc h2 {
+
#desc h3 {
color: #fff;
color: #fff;
padding: 15px 15px 0;
padding: 15px 15px 0;
text-align: left;
text-align: left;
-
text-size: 18pt;
+
font-size: 18pt;
-
font-size: 16pt;
+
        text-decoration: none;
 +
        padding-bottom: 10px;
}
}
Line 399: Line 400:
   <div id="navitabs">
   <div id="navitabs">
     <h2 class="hide">Sample navigation menu:</h2>
     <h2 class="hide">Sample navigation menu:</h2>
-
     <a class="navitab"https://2012.igem.org/Team:Penn_State">Home</a>
+
     <a class="navitab" href="https://2012.igem.org/Team:Penn_State">Home</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Team">Team</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Team">Team</a>
-
     <span class="hide"> | </span> <a class="activenavitab" href="https://2012.igem.org/Team:Penn_State/Project">Projects</a>
+
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Project">Projects</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Parts">Parts</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Parts">Parts</a>
-
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Modeling">Modeling</a>
+
     <span class="hide"> | </span> <a class="activenavitab" href="https://2012.igem.org/Team:Penn_State/Modeling">Main Results</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Notebook">Notebook</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Notebook">Notebook</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Other">Other</a>
     <span class="hide"> | </span> <a class="navitab" href="https://2012.igem.org/Team:Penn_State/Other">Other</a>
Line 409: Line 410:
      
      
   <div id="desc">
   <div id="desc">
-
     <h2>Bidirectional Promoters</h2>
+
     <h3>Main Results</h3>
-
     <p>Scientists are frequently confounded by wayward promoters; that is, promoters which do not produce
+
     <p>Included here are the pooled results of each project. All results are measurements of fluorescence performed by a TECANM1000 instrument. For detailed discussion, please see the individual <a href="href="https://2012.igem.org/Team:Penn_State/Project>project pages</a>. </p>
-
the expected proteins. Some bidirectional promoters are known to exist, but which way they promote
+
-
and the degree of expression has not been quantified. This project will test the directionality of
+
-
several BioBrick promoters to answer these questions. </p>
+
   </div>
   </div>
    
    
   <div id="main">
   <div id="main">
-
  <h1>BiDirectional Promoter Project Data</h1>
+
  <h2>BiDirectional Promoter Project Data</h2>
<p>Here we can see some of the data collected for the Bidirectional Promoter Project. The data shows the fluorescence of GFP and RFP from different promoters collected by the TCAN.
<p>Here we can see some of the data collected for the Bidirectional Promoter Project. The data shows the fluorescence of GFP and RFP from different promoters collected by the TCAN.
</p>
</p>
-
<p>GFP Data for all of the samples tested and the average of those samples for a given construct. The promoters tested so far are <a href="http://partsregistry.org/Part:BBa_J23102">BBa_J23102</a>, and three custom palindromic promoters.  
+
<p>GFP Data for all of the samples tested and the average of those samples for a given construct. The promoters tested so far are <a href="http://partsregistry.org/Part:BBa_J23102">BBa_J23102</a>, and three custom palindromic promoters. </p>
-
</p>
+
<img src="https://static.igem.org/mediawiki/2012/f/fc/BiDirresults.png"></br>
-
<a href="https://static.igem.org/mediawiki/2012/3/3c/PennState_BiDir_GFP_All_Graph.jpg">
+
<h2>Multiple Start Codon Project Data</h2>
-
<img src="https://static.igem.org/mediawiki/2012/3/3c/PennState_BiDir_GFP_All_Graph.jpg" width="575px" height="275px">
+
<p>Here is some of the preliminary data for the MSC Project. The graph depicts the fluorescence measured by expression from each individual start codon.</p>
-
</a>
+
<img src="https://static.igem.org/mediawiki/2012/2/24/MSC_results.png"></br>
-
<br/>
+
<h2>Codon Optimization</h2>
-
<a href="https://static.igem.org/mediawiki/2012/a/a9/PennState_BiDir_GFP_Combined_Graph.jpg">
+
<p>Here is some of the preliminary data for the Codon Optimization Project. The graph depicts the fluorescence measured in each threonine codon 6-repeat sequence.</p>
-
<img src="https://static.igem.org/mediawiki/2012/a/a9/PennState_BiDir_GFP_Combined_Graph.jpg" width="380px" height="270px">
+
<img src="https://static.igem.org/mediawiki/2012/c/cc/Threonine6_results.png">
-
</a>
+
-
<br/>
+
-
<p>RFP Data for all of the samples tested and the average of those samples is shown below.</p>
+
-
</p>
+
-
<a href="https://static.igem.org/mediawiki/2012/b/b6/PennState_BiDir_RFP_All_Graph.jpg">
+
-
<img src="https://static.igem.org/mediawiki/2012/b/b6/PennState_BiDir_RFP_All_Graph.jpg" width="575px" height="275px">
+
-
</a>
+
-
<br/>
+
-
<a href="https://static.igem.org/mediawiki/2012/9/9f/PennState_BiDir_RFP_Combined_Graph.jpg">
+
-
<img src="https://static.igem.org/mediawiki/2012/9/9f/PennState_BiDir_RFP_Combined_Graph.jpg" width="380px" height="270px">
+
-
</a>
+
   </div>
   </div>
    
    
Line 449: Line 436:
       <li><a href="https://2012.igem.org/Team:Penn_State/Human_Practices">Human Practices</a></li>
       <li><a href="https://2012.igem.org/Team:Penn_State/Human_Practices">Human Practices</a></li>
     </ul>
     </ul>
-
    <h3>Picture Gallery</h3>
+
 
-
    <img class="photo" src="../images/test.jpg" height="100" width="130" alt="" />
+
     <h3>Projects</h3>
     <h3>Projects</h3>
     <ul>
     <ul>

Latest revision as of 03:59, 27 October 2012

Bidirectional Promoters Overview

Main Results

Included here are the pooled results of each project. All results are measurements of fluorescence performed by a TECANM1000 instrument. For detailed discussion, please see the individual project pages.

BiDirectional Promoter Project Data

Here we can see some of the data collected for the Bidirectional Promoter Project. The data shows the fluorescence of GFP and RFP from different promoters collected by the TCAN.

GFP Data for all of the samples tested and the average of those samples for a given construct. The promoters tested so far are BBa_J23102, and three custom palindromic promoters.


Multiple Start Codon Project Data

Here is some of the preliminary data for the MSC Project. The graph depicts the fluorescence measured by expression from each individual start codon.


Codon Optimization

Here is some of the preliminary data for the Codon Optimization Project. The graph depicts the fluorescence measured in each threonine codon 6-repeat sequence.

Retrieved from "http://2012.igem.org/Team:Penn_State/Modeling"