Team:Berkeley/wikipictures

From 2012.igem.org

(Difference between revisions)
(Automation)
(Automation)
 
(30 intermediate revisions not shown)
Line 17: Line 17:
[[File:Home_subheader4_hover.jpg|200px]]
[[File:Home_subheader4_hover.jpg|200px]]
[[File:Agilent_logo.png|200px]]
[[File:Agilent_logo.png|200px]]
 +
[[File:SynBioInst_logo.png|200px]]
[[File:SynBERC_logo.png|200px]]
[[File:SynBERC_logo.png|200px]]
[[File:NSF_logo.png|200px]]
[[File:NSF_logo.png|200px]]
[[File:IDTech_logo.png|200px]]
[[File:IDTech_logo.png|200px]]
-
 
==Project==
==Project==
Line 39: Line 39:
[[File:Project0_subheader2.jpg|none|600px]]
[[File:Project0_subheader2.jpg|none|600px]]
[[File:Project0_subheader3.jpg|none|600px]]
[[File:Project0_subheader3.jpg|none|600px]]
-
[[File:Project1_subheader3.jpg|none|600px]]
+
[[File:Project0_subheader4.jpg|none|600px]]
 +
[[File:Project1_subheader1.jpg|none|600px]]
[[File:Project1_subheader2.jpg|none|600px]]
[[File:Project1_subheader2.jpg|none|600px]]
[[File:Project1_subheader3.jpg|none|600px]]
[[File:Project1_subheader3.jpg|none|600px]]
Line 53: Line 54:
[[File:Project4_subheader2.jpg|none|600px]]
[[File:Project4_subheader2.jpg|none|600px]]
[[File:Project4_subheader3.jpg|none|600px]]
[[File:Project4_subheader3.jpg|none|600px]]
 +
[[File:Project4_subheader4.jpg|none|600px]]
 +
==Team==
==Team==
[[File:Team_header1.jpg|none|600px]]
[[File:Team_header1.jpg|none|600px]]
Line 96: Line 99:
[[File:slideshow22.jpg|200px]]
[[File:slideshow22.jpg|200px]]
[[File:slideshow23.jpg|200px]]
[[File:slideshow23.jpg|200px]]
-
[[File:slideshow24.jpg|200px]]
 
-
[[File:slideshow25.jpg|200px]]
 
-
[[File:slideshow26.jpg|200px]]
 
-
[[File:slideshow27.jpg|200px]]
 
-
[[File:slideshow28.jpg|200px]]
 
-
[[File:slideshow29.jpg|200px]]
 
=Localization=
=Localization=
Line 110: Line 107:
[[File:yMRY045_nucleus.jpg|400px]]
[[File:yMRY045_nucleus.jpg|400px]]
[[File:yMRY003_nucleus.jpg|400px]]
[[File:yMRY003_nucleus.jpg|400px]]
 +
[[File:nucleus.jpg|400px]]
 +
[[File:CP.jpg|400px]]
 +
[[File:VM.jpg|400px]]
 +
[[File:Actin.jpg|400px]]
[[File:iGEM promoter characterization.png|300px]]
[[File:iGEM promoter characterization.png|300px]]
 +
 +
[[File:scale up|400px]]
 +
[[File:equation|400px]]
=Construction=
=Construction=
Line 128: Line 132:
[[File:ThomasNotebook.pdf|none]]
[[File:ThomasNotebook.pdf|none]]
[[File:AustinNotebook.pdf|none]]
[[File:AustinNotebook.pdf|none]]
-
[[File:HarneetNotebook.pdf|none]]
+
[[File:iGEM Harneet Wetlab Notebook.pdf|none]]
 +
[[File:IGEM Harneet Computational Notebook.pdf|none]]
[[File:MasakiNotebook.pdf|none]]
[[File:MasakiNotebook.pdf|none]]
[[File:VincentNotebook.pdf|none]]
[[File:VincentNotebook.pdf|none]]
Line 134: Line 139:
=Promoter library=
=Promoter library=
[[File:yRC020_minmax_TDH3_ZRC1.jpg|400px]]
[[File:yRC020_minmax_TDH3_ZRC1.jpg|400px]]
 +
[[File:yRC020_nrw_TDH3_ZRC1.jpg|400px]]
 +
[[File:yRC021_minmax_TEF1_ZRC1.jpg|400px]]
 +
[[File:yRC021_nrw_TEF1_ZRC1.jpg|400px]]
 +
[[File:yRC022_minmax_RNR2_ZRC1.jpg|400px]]
 +
[[File:yRC022_nrw_RNR2_ZRC1.jpg|400px]]
 +
[[File:yRC023_minmax_REV1_ZRC1.jpg|400px]]
 +
[[File:yRC023_nrw_REV1_ZRC1.jpg|400px]]
 +
[[File:yRC027_minmax_RNR2_Actin.jpg|400px]]
 +
[[File:yRC027_nrw_RNR2_Actin.jpg|400px]]
 +
[[File:yRC028_minmax_REV1_Actin.jpg|400px]]
 +
[[File:yRC028_nrw_REV1_Actin.jpg|400px]]
 +
[[File:yRC030_minmax_TDH3_CP.jpg|400px]]
 +
[[File:yRC030_nrw_TDH3_CP.jpg|400px]]
 +
[[File:yRC031_minmax_TEF1_CP.jpg|400px]]
 +
[[File:yRC031_nrw_TEF1_CP.jpg|400px]]
 +
[[File:yRC032_minmax_RNR2_CP.jpg|400px]]
 +
[[File:yRC032_nrw_RNR2_CP.jpg|400px]]
 +
[[File:yRC033_minmax_REV1_CP.jpg|400px]]
 +
[[File:yRC033_nrw_REV1_CP.jpg|400px]]
 +
[[File:yRC036_minmax_TEF1_Nucleus.jpg|400px]]
 +
[[File:yRC036_nrw_TEF1_Nucleus.jpg|400px]]
 +
[[File:yRC037_minmax_RNR2_Nucleus.jpg|400px]]
 +
[[File:yRC037_nrw_RNR2_Nucleus.jpg|400px]]
 +
[[File:yRC038_minmax_REV1_Nucleus.jpg|400px]]
 +
[[File:yRC038_nrw_REV1_Nucleus.jpg|400px]]
 +
[[File:yTC03_minmax_RPL18B_Actin.jpg|400px]]
 +
[[File:yTC03_nrw_RPL18B_Actin.jpg|400px]]
 +
[[File:yAJ12_minmax_RPL18B_CP.jpg|400px]]
 +
[[File:yAJ12_nrw_RPL18B_CP.jpg|400px]]
 +
[[File:yMY09_minmax_RPL18B_Nucleus.jpg|400px]]
 +
[[File:yMY09_nrw_RPL18B_Nucleus.jpg|400px]]
 +
[[File:yVY015_minmax_RPL18B_ZRC1.jpg|400px]]
 +
[[File:yVY015_nrw_RPL18B_ZRC1.jpg|400px]]
 +
 +
 +
 +
[[File:sample micode.png|782px]]
[[File:sample micode.png|782px]]
[[File:number of micodes.png|782px]]
[[File:number of micodes.png|782px]]
-
 
=Automation=
=Automation=
 +
[[File:cellID.m.zip|cellID matlab file]] <br>
 +
[[File:cellID- yATJ012-sat 1.png|450px]]<br>
 +
[[File:cellID- yATJ012-sat 2.png|450px]]<br>
 +
[[File:cellID- yATJ012-sat 1 trans.png|cellID- yATJ012-sat 1 trans]] <br>
 +
[[File:cellID- yATJ012-sat 2 trans.png|cellID- yATJ012-sat 2 trans]] <br>
 +
-
[[File:cellID- yATJ012-sat.png|450px]]<br>
 
[[File:Threshold.jpg|450px]] <br>
[[File:Threshold.jpg|450px]] <br>
[[File:PixelClusters.jpg|450px]]<br>
[[File:PixelClusters.jpg|450px]]<br>
[[File:GeometricProperties.jpg|450px]]<br>
[[File:GeometricProperties.jpg|450px]]<br>
-
[[File:Output.jpg|450px]]<br>
+
[[File:Output.png|250px]]<br>
[[File:Unused prop.jpg|450px]]<br>
[[File:Unused prop.jpg|450px]]<br>
-
[[File:Output.jpg|none]]<br>
+
[[File:Compactness.jpg|200px]]<br>
-
[[File:Organelles.zip|none]]<br>
+
[[File:Area.jpg|200px]]<br>
 +
[[File:FormFactor.jpg|200px]]<br>
 +
[[File:MajorVsMinor.jpg|200px]]<br>
 +
[[File:MajorVsMinor.jpg|200px]]<br>
 +
[[File:NucleusCheck.jpg|200px]]<br>
 +
[[File:Organelles.zip|200px]]<br>
=Leucine Zippers==
=Leucine Zippers==
-
[[File:Zipper picture.png]]
+
[[File:LeucineZipper Analysis 2.png|LeucineZipper Analysis 2]]
 +
[[File:Zipper picture.png]]<br>
 +
[[File:Keating Diagram.png]]<br>
 +
[[File:pVY23 strong.png|782px]]<br>
 +
[[File:pVY27 medium.png|782px]]<br>
 +
[[File:pVY26 weak.png|782px]]<br>
 +
 
 +
[[File:nuc1_red.png|200px]]
 +
[[File:nuc1_green.png|200px]]
 +
[[File:nuc1_blue.png|200px]]
 +
[[File:nuc1_DIC.png|200px]]
 +
[[File:nuc1_micode.png|200px]]
 +
[[File:nuc1_merge.png|200px]]
 +
 
 +
[[File:full_red.png|200px]]
 +
[[File:full_DIC.png|200px]]
 +
[[File:full_micode.png|200px]]
 +
 
 +
[[File:strong_red.png|200px]]
 +
[[File:strong_micode.png|200px]]
 +
[[File:strong_blue.png|200px]]
 +
[[File:strong_green.png|200px]]
 +
 
 +
[[File:weak_red.png|200px]]
 +
[[File:weak_micode.png|200px]]
 +
[[File:weak_blue.png|200px]]
 +
[[File:weak_green.png|200px]]

Latest revision as of 03:18, 27 October 2012

Contents

Site Fundamentals

Home

Arrow left.png Arrow right.png NavigationBar Berkeley2012.jpg NavigationBar Berkeley2012 2.jpg

Home header1.jpg
Home header2.jpg
Home header3.jpg

Home subheader1.jpg Home subheader1 hover.jpg Home subheader2.jpg Home subheader2 hover.jpg Home subheader3.jpg Home subheader3 hover.jpg Home subheader4.jpg Home subheader4 hover.jpg Agilent logo.png SynBioInst logo.png SynBERC logo.png NSF logo.png IDTech logo.png

Project

Project header0.jpg
Project header1.jpg
Project header2.jpg
Project header3.jpg
Project header4.jpg

Project nav1.jpg Project nav1 hover.jpg Project nav2.jpg Project nav2 hover.jpg Project nav3.jpg Project nav3 hover.jpg Project nav4.jpg Project nav4 hover.jpg

Project0 subheader1.jpg
Project0 subheader2.jpg
Project0 subheader3.jpg
Project0 subheader4.jpg
Project1 subheader1.jpg
Project1 subheader2.jpg
Project1 subheader3.jpg
Project1 subheader4.jpg
Project2 subheader1.jpg
Project2 subheader2.jpg
Project3 subheader1.jpg
Project3 subheader2.jpg
Project3 subheader3.jpg
Project3 subheader4.jpg
Project3 subheader5.jpg
Project4 subheader1.jpg
Project4 subheader2.jpg
Project4 subheader3.jpg
Project4 subheader4.jpg

Team

Team header1.jpg
Team subheader1.jpg
Team subheader2.jpg

RobertChen.jpg CeliaCheung.jpg ThomasChow.jpg AustinJones.jpg HarneetRishi.jpg MasakiYamada.jpg VincentYeh.jpg WillDeLoache.jpg TerryJohnson.jpg JohnDueber.jpg

Other Pages

Safety header.jpg
Parts header1.jpg
Notebooks header1.jpg
Attributions header.jpg

Slideshow

Slideshow1.jpg Slideshow2.jpg Slideshow3.jpg Slideshow4.jpg Slideshow5.jpg Slideshow6.jpg Slideshow7.jpg Slideshow8.jpg Slideshow9.jpg Slideshow10.jpg Slideshow11.jpg Slideshow12.jpg Slideshow13.jpg Slideshow14.jpg Slideshow15.jpg Slideshow16.jpg Slideshow17.jpg Slideshow18.jpg Slideshow19.jpg Slideshow20.jpg Slideshow21.jpg Slideshow22.jpg Slideshow23.jpg

Localization

YATJ012.jpg YTC003 Actin.jpg YMRY045 CP.jpg YMRY045 VM.jpg YMRY045 nucleus.jpg YMRY003 nucleus.jpg Nucleus.jpg CP.jpg VM.jpg Actin.jpg

IGEM promoter characterization.png

400px 400px

Construction

BsmBI.jpg GGpart.jpg GGcassette.jpg GGmultigene1.jpg GGmultigene2.jpg Full MiCode.jpg

Notebooks

File:RobertNotebook1.pdf File:RobertNotebook2.pdf File:RobertNotebook3.pdf File:CeliaNotebook.pdf File:ThomasNotebook.pdf File:AustinNotebook.pdf File:IGEM Harneet Wetlab Notebook.pdf File:IGEM Harneet Computational Notebook.pdf File:MasakiNotebook.pdf File:VincentNotebook.pdf

Promoter library

YRC020 minmax TDH3 ZRC1.jpg YRC020 nrw TDH3 ZRC1.jpg YRC021 minmax TEF1 ZRC1.jpg YRC021 nrw TEF1 ZRC1.jpg YRC022 minmax RNR2 ZRC1.jpg YRC022 nrw RNR2 ZRC1.jpg YRC023 minmax REV1 ZRC1.jpg YRC023 nrw REV1 ZRC1.jpg YRC027 minmax RNR2 Actin.jpg YRC027 nrw RNR2 Actin.jpg YRC028 minmax REV1 Actin.jpg YRC028 nrw REV1 Actin.jpg YRC030 minmax TDH3 CP.jpg YRC030 nrw TDH3 CP.jpg YRC031 minmax TEF1 CP.jpg YRC031 nrw TEF1 CP.jpg YRC032 minmax RNR2 CP.jpg YRC032 nrw RNR2 CP.jpg YRC033 minmax REV1 CP.jpg YRC033 nrw REV1 CP.jpg YRC036 minmax TEF1 Nucleus.jpg YRC036 nrw TEF1 Nucleus.jpg YRC037 minmax RNR2 Nucleus.jpg YRC037 nrw RNR2 Nucleus.jpg YRC038 minmax REV1 Nucleus.jpg YRC038 nrw REV1 Nucleus.jpg YTC03 minmax RPL18B Actin.jpg YTC03 nrw RPL18B Actin.jpg YAJ12 minmax RPL18B CP.jpg YAJ12 nrw RPL18B CP.jpg YMY09 minmax RPL18B Nucleus.jpg YMY09 nrw RPL18B Nucleus.jpg YVY015 minmax RPL18B ZRC1.jpg YVY015 nrw RPL18B ZRC1.jpg



Sample micode.png

Number of micodes.png

Automation

File:CellID.m.zip
CellID- yATJ012-sat 1.png
450px
cellID- yATJ012-sat 1 trans
cellID- yATJ012-sat 2 trans


Threshold.jpg
PixelClusters.jpg
GeometricProperties.jpg
Output.png
Unused prop.jpg
Compactness.jpg
Area.jpg
FormFactor.jpg
MajorVsMinor.jpg
MajorVsMinor.jpg
NucleusCheck.jpg
File:Organelles.zip

Leucine Zippers=

LeucineZipper Analysis 2 Zipper picture.png
Keating Diagram.png
PVY23 strong.png
PVY27 medium.png
PVY26 weak.png

200px 200px 200px Nuc1 DIC.png 200px 200px

Full red.png Full DIC.png Full micode.png

Strong red.png Strong micode.png Strong blue.png Strong green.png

Weak red.png Weak micode.png Weak blue.png Weak green.png