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Team:HUST-China/Achievements/Modeling
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Not only have we design bacterial batteries, but we modeled simplified pathway of bacterial batteries. In the project, we have constructed three models, the single cell model, multi-cell model, and CCDB-related model. All of these can co-attribute to this pathway.<br/> | Not only have we design bacterial batteries, but we modeled simplified pathway of bacterial batteries. In the project, we have constructed three models, the single cell model, multi-cell model, and CCDB-related model. All of these can co-attribute to this pathway.<br/> | ||
<h3>1>Design of bacterial batteries</h3> | <h3>1>Design of bacterial batteries</h3> | ||
| + | <img src="https://static.igem.org/mediawiki/2012/b/b3/Gm.png" width=750px></img> | ||
<h3>2>Simulation and calculation of the distribution of proton in panel</h3> | <h3>2>Simulation and calculation of the distribution of proton in panel</h3> | ||
*Formation of hydrogen ion's concentration gradient<br/> | *Formation of hydrogen ion's concentration gradient<br/> | ||
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<h4>2,Cell density-time</h4> | <h4>2,Cell density-time</h4> | ||
<img src="https://static.igem.org/mediawiki/2012/a/a0/Cell_den.png"></img><br/> | <img src="https://static.igem.org/mediawiki/2012/a/a0/Cell_den.png"></img><br/> | ||
| - | <h4> | + | <h4>3,CCDB-time </h4> |
<img src="https://static.igem.org/mediawiki/2012/3/37/Ccdb.png"></img><br/> | <img src="https://static.igem.org/mediawiki/2012/3/37/Ccdb.png"></img><br/> | ||
<h3>4>Simulating the Quorum-Sensing and aggregation by constructing software named HUST-CAL 1.0</h4> | <h3>4>Simulating the Quorum-Sensing and aggregation by constructing software named HUST-CAL 1.0</h4> | ||
| - | <img src="https://static.igem.org/mediawiki/2012/5/58/Cal1.png"></img> | + | <img src="https://static.igem.org/mediawiki/2012/5/58/Cal1.png"></img><br/> |
Figure 1. The distribution of bacteria in panel based on the rule of quorum-sensing<br/> | Figure 1. The distribution of bacteria in panel based on the rule of quorum-sensing<br/> | ||
| - | <img src="https://static.igem.org/mediawiki/2012/7/72/Cal2.png"></img> | + | <img src="https://static.igem.org/mediawiki/2012/7/72/Cal2.png"></img><br/> |
Figure 2. The distribution of bacteria in panel on the rule of aggregation<br/> | Figure 2. The distribution of bacteria in panel on the rule of aggregation<br/> | ||
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</body> | </body> | ||
</html> | </html> | ||
Latest revision as of 22:33, 26 September 2012
HUST CHINA
Modeling Achievements
Not only have we design bacterial batteries, but we modeled simplified pathway of bacterial batteries. In the project, we have constructed three models, the single cell model, multi-cell model, and CCDB-related model. All of these can co-attribute to this pathway.1>Design of bacterial batteries
2>Simulation and calculation of the distribution of proton in panel
*Formation of hydrogen ion's concentration gradientIn our model, we first put up an idea about building a concentration gradient of hydrogen ions by wasted water. The two with different PH values are lay at opposite places, and were linked with each other by a narrow bucket, which can form the concentration gradient.
3>Quorum-Sensing
Simulate and calculate different molecules or cells with time-dependent concentration, i.e., AHL, cell-density, CCDB. The results can be showed in the three figures below.1,AHL-time
2,Cell density-time
3,CCDB-time
