Team:SYSU-China/project/quorumtransform

From 2012.igem.org

(Difference between revisions)
(Created page with "<html> <style type="text/css"> h1.firstHeading{ display:none; } #form1 table tr td { font-family: Hobo Std; } #form2 table tr td { font-family: Hobo Std; } a { font-family: "...")
 
(3 intermediate revisions not shown)
Line 44: Line 44:
       <table width="869" border="0">
       <table width="869" border="0">
         <tr>
         <tr>
-
           <td width="286" height="132">&nbsp;</td>
+
           <td width="286" height="154">&nbsp;</td>
-
           <td width="76" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="76" align="center" valign="middle"><p class="style1"><a href="https://2012.igem.org/Team:SYSU-China/project">Background</a></p></td>
-
            <p class="style1"><a href="https://2012.igem.org/Team:SYSU-China/project">Background</a></p></td>
+
           <td width="20">&nbsp;</td>
           <td width="20">&nbsp;</td>
-
           <td width="72" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="72" align="center" valign="middle"><p><a href="https://2012.igem.org/Team:SYSU-China/project/cyclecontrol" class="style1">M1:Cycle Control</a></p></td>
-
            <p><a href="https://2012.igem.org/Team:SYSU-China/project/cyclecontrol">Cycle Control</a></p></td>
+
           <td width="15">&nbsp;</td>
           <td width="15">&nbsp;</td>
-
           <td width="73" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="73" align="center" valign="middle"><p class="style1">M2:Quorum Transform</p></td>
-
            <p>Quorum Transform</p></td>
+
           <td width="14">&nbsp;</td>
           <td width="14">&nbsp;</td>
-
           <td width="76" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="76" align="center" valign="middle"><p class="style1"><a href="https://2012.igem.org/Team:SYSU-China/project/supergeneguard">M3:Super Geneguard</a></p></td>
-
            <p><a href="https://2012.igem.org/Team:SYSU-China/project/theoreticalvalue" class="style1">Theoretical Valuel</a></p></td>
+
           <td width="12">&nbsp;</td>
           <td width="12">&nbsp;</td>
-
           <td width="84" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="84" align="center" valign="middle"><p><a href="https://2012.igem.org/Team:SYSU-China/project/theoreticalvalue" class="style1">Theoretical Valuel</a></p></td>
-
            <p><a href="https://2012.igem.org/Team:SYSU-China/project/manufactureapplications" class="style1">Manufacture Applications</a></p></td>
+
           <td width="14">&nbsp;</td>
           <td width="14">&nbsp;</td>
-
           <td width="72" align="center" valign="middle"><p>&nbsp;</p>
+
           <td width="72" align="center" valign="middle"><p><a href="https://2012.igem.org/Team:SYSU-China/project/manufactureapplications" class="style1">Inductrial Applications</a></p></td>
-
            <p><a href="https://2012.igem.org/Team:SYSU-China/project/supergeneguard" class="style1">Super Geneguard</a></p></td>
+
         </tr>
         </tr>
       </table>
       </table>
Line 71: Line 65:
     <tr>
     <tr>
       <td width="39" height="599" rowspan="8">&nbsp;</td>
       <td width="39" height="599" rowspan="8">&nbsp;</td>
-
       <td width="179" height="70" align="center" valign="middle"><span class="style2"><a href="https://2012.igem.org/Team:SYSU-China/notebookl">Notebook</a></span></td>
+
       <td width="179" height="70" align="center" valign="middle"><span class="style2"><a href="https://2012.igem.org/Team:SYSU-China/notebook">Notebook</a></span></td>
       <td width="46" rowspan="8">&nbsp;</td>
       <td width="46" rowspan="8">&nbsp;</td>
       <td width="612" rowspan="8" align="center" valign="middle"><div style="height:590px;width:612px;overflow:scroll">
       <td width="612" rowspan="8" align="center" valign="middle"><div style="height:590px;width:612px;overflow:scroll">
<h3>&nbsp;</h3>
<h3>&nbsp;</h3>
-
           <h3>Introduction</h3>
+
           <h3 align="left" class="style1">Introduction</h3>
           <p align="left" class="style1">There is a more interesting method in balance two different population in the same environment. ----Let the majority turn into minority automatically! By using a bistable toggle switch, we create two different quorum. By designing a auto-regulative part, we build an asymmetry differentiation mechanism. We tried to prove these by both experiment and modeling. </p>
           <p align="left" class="style1">There is a more interesting method in balance two different population in the same environment. ----Let the majority turn into minority automatically! By using a bistable toggle switch, we create two different quorum. By designing a auto-regulative part, we build an asymmetry differentiation mechanism. We tried to prove these by both experiment and modeling. </p>
-
           <h3>Method</h3>
+
           <h3 align="left" class="style1">Method</h3>
           <p align="center"><img src="https://static.igem.org/mediawiki/2012/1/13/Introduction.png" alt="" width="600" height="395" /></p>
           <p align="center"><img src="https://static.igem.org/mediawiki/2012/1/13/Introduction.png" alt="" width="600" height="395" /></p>
-
           <h3 align="left">Result</h3>
+
          <p align="center">Figure 1. Genetic pathway constructed for Quorum transformation(asymmetry differentiation)</p>
 +
          <p align="left" class="style1">The circuit compose two parts. They can link into different vectors and co-transform into one bacteria.</p>
 +
          <p align="left" class="style1"> Toggle switch part links LuxI(F2610) to Toggle Switch(K598002), built in vector pSB4k5 with kan+ antibiotic mark. </p>
 +
          <p align="left" class="style1">Regulative part links CI(C0051) to AHL signal receiver(F2620), built in pSB3C5 with cm+ antibiotic mark.</p>
 +
           <h3 align="left" class="style1">Result</h3>
           <p align="left"><span class="style1"><a href="https://2012.igem.org/Team:SYSU-China/modeling"><u>Modeling</u></a> shows that this model can acquire new balance, meanwhile, it is more stable and robust than an ordinary genetic toggle switch.</span></p>
           <p align="left"><span class="style1"><a href="https://2012.igem.org/Team:SYSU-China/modeling"><u>Modeling</u></a> shows that this model can acquire new balance, meanwhile, it is more stable and robust than an ordinary genetic toggle switch.</span></p>
           <p align="left" class="style1"><u>Experiment</u> </p>
           <p align="left" class="style1"><u>Experiment</u> </p>
Line 88: Line 86:
           <p align="left" class="style1">Finish the toggle switch part and test the whole gene circuit. </p>
           <p align="left" class="style1">Finish the toggle switch part and test the whole gene circuit. </p>
           <p align="left" class="style1">Get more experimental data.</p>
           <p align="left" class="style1">Get more experimental data.</p>
-
         </div>    
+
         </div></td>
-
</td>
+
     </tr>
     </tr>
     <tr>
     <tr>
Line 98: Line 95:
     </tr>
     </tr>
     <tr>
     <tr>
-
       <td height="76" align="center" valign="middle"><span class="style2"><a href="https://2012.igem.org/Team:SYSU-China/modeling">Modeling</a></span></td>
+
       <td height="70" align="center" valign="middle"><span class="style2"><a href="https://2012.igem.org/Team:SYSU-China/modeling">Modeling</a></span></td>
     </tr>
     </tr>
     <tr>
     <tr>

Latest revision as of 03:11, 27 September 2012

 

Background

 

M1:Cycle Control

 

M2:Quorum Transform

 

M3:Super Geneguard

 

Theoretical Valuel

 

Inductrial Applications

  Notebook  

 

Introduction

There is a more interesting method in balance two different population in the same environment. ----Let the majority turn into minority automatically! By using a bistable toggle switch, we create two different quorum. By designing a auto-regulative part, we build an asymmetry differentiation mechanism. We tried to prove these by both experiment and modeling.

Method

Figure 1. Genetic pathway constructed for Quorum transformation(asymmetry differentiation)

The circuit compose two parts. They can link into different vectors and co-transform into one bacteria.

Toggle switch part links LuxI(F2610) to Toggle Switch(K598002), built in vector pSB4k5 with kan+ antibiotic mark.

Regulative part links CI(C0051) to AHL signal receiver(F2620), built in pSB3C5 with cm+ antibiotic mark.

Result

Modeling shows that this model can acquire new balance, meanwhile, it is more stable and robust than an ordinary genetic toggle switch.

Experiment

Regulative part has been constructed.

Toggle switch part was constructed but sequencing show that there is deletion of core part of toggle switch, which was provided by another iGem team. And we also proved that the parts to build up toogle

We failed to build up one of device till now, so it may take more time to do the function test.

Future Work

Finish the toggle switch part and test the whole gene circuit.

Get more experimental data.

Human Practice
Achievement
Modeling
Team
Home