Team:UNITN-Trento/Parts

From 2012.igem.org

(Difference between revisions)
 
(16 intermediate revisions not shown)
Line 1: Line 1:
-
 
<html>
<html>
<head>
<head>
    
    
-
+
<meta name="viewport" content="width=1200, user-scalable=0">
<meta charset="utf-8" />
<meta charset="utf-8" />
<title>Our Parts</title>
<title>Our Parts</title>
Line 32: Line 31:
<body>
<body>
 +
 +
<!--[if lte IE 9]>
 +
<style type="text/css">
 +
body {
 +
filter:blur(add=false, direction=270 strength=10);
 +
-ms-filter:blur(add=false, direction=270 strength=10);
 +
background-image: none;
 +
}
 +
#bannerImage {
 +
display: none;
 +
}
 +
#header {
 +
display: none;
 +
}
 +
#canvas {
 +
display: none;
 +
}
 +
#footer {
 +
display: none;
 +
}
 +
</style>
 +
<h2 style="font-family: 'Open Sans'; line-height: 40px; color:#ffae00; padding:0.5em; font-size:30pt !important; text-align: center; width: 900px; margin: 100px auto;">It appears you're using Internet Explorer. This website does not work at his best on older browsers. Please use a modern one like <a href="http://www.google.com/chrome">Chrome</a>, <a href="http://www.mozilla.org/en-US/firefox/new">Firefox</a> or <a href="http://www.apple.com/safari">Safari</a> to enjoy the full experience. </h2>
 +
<![endif]-->
 +
 +
<noscript>
 +
<style type="text/css">
 +
body {
 +
filter:blur(add=false, direction=270 strength=10);
 +
-ms-filter:blur(add=false, direction=270 strength=10);
 +
background-image: none;
 +
}
 +
#bannerImage {
 +
display: none;
 +
}
 +
#header {
 +
display: none;
 +
}
 +
#canvas {
 +
display: none;
 +
}
 +
 +
#footer {
 +
display: none;
 +
}
 +
</style>
 +
 +
<h2 style="font-family: 'Open Sans'; line-height: 40px; color:#ffae00; padding:0.5em; font-size:30pt !important; text-align: center; width: 900px; margin: 100px auto;">It appears you have JavaScript disabled. Our Wiki needs it for you to enjoy the full experience. Please enable Javascript and refresh the page.</h2>
 +
</noscript>
<div id="bannerImage" class="content-fill" style="overflow: hidden; position: absolute; height: 400px; background-position: 50% 58%;"></div>
<div id="bannerImage" class="content-fill" style="overflow: hidden; position: absolute; height: 400px; background-position: 50% 58%;"></div>
Line 44: Line 91:
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Project/CrustAway">Crust Away</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Project/CrustAway">Crust Away</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Project/Terminators">Terminator 5</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Project/Terminators">Terminator 5</a></li>
 +
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Attributions">Attributions</a></li>
</ul>
</ul>
</div>
</div>
</li>
</li>
 +
<li><a href="https://2012.igem.org/Team:UNITN-Trento/DataPage">Data Page</a></li>
<li class="folder activeLink"><a href="javascript:void(0);">Parts</a>
<li class="folder activeLink"><a href="javascript:void(0);">Parts</a>
<div class="notch"></div>
<div class="notch"></div>
Line 56: Line 105:
</div>
</div>
</li>
</li>
-
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Achievements">Achievements</a></li>
+
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Achievements">Judging</a></li>
<li class="folder"><a href="javascript:void(0);">Team</a>
<li class="folder"><a href="javascript:void(0);">Team</a>
<div class="notch"></div>
<div class="notch"></div>
Line 66: Line 115:
<li><a href="https://igem.org/Team.cgi?id=731">Team Profile</a></li>
<li><a href="https://igem.org/Team.cgi?id=731">Team Profile</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Trento">Where We Are</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Trento">Where We Are</a></li>
-
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Gallery">Gallery</a></li>
+
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Press">Press</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Press">Press</a></li>
</ul>
</ul>
Line 86: Line 135:
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Meetings">Meetings</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Meetings">Meetings</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Protocols">Protocols</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Protocols">Protocols</a></li>
-
<li><a href="https://2012.igem.org/Team:UNITN-Trento/H2S">H<sub>2</sub>S</a></li>
 
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Tools">Tools</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Tools">Tools</a></li>
</ul>
</ul>
</div>
</div>
</li>
</li>
-
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Safety">Safety</a></li>
+
<li class="folder"><a href="javascript:void(0);">Safety</a>
 +
<div class="notch"></div>
 +
<div class="subnav" >
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Safety">Safety</a></li>
 +
<li><a href="https://2012.igem.org/Team:UNITN-Trento/H2S">H<sub>2</sub>S</a></li>
 +
</ul>
 +
</div>
 +
</li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Outreach">Outreach</a></li>
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Outreach">Outreach</a></li>
-
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Art">Art</a></li>
+
<li><a href="https://2012.igem.org/Team:UNITN-Trento/Art">Art&Science</a></li>
</ul>
</ul>
</div>
</div>
Line 113: Line 169:
<div class="slider-wrapper theme-default">
<div class="slider-wrapper theme-default">
<div id="slider" class="nivoSlider">
<div id="slider" class="nivoSlider">
-
<a href="javascript:void(0);"><img src="http://www.science.unitn.it/~igem/img/slider/Mugshot.jpg" alt="" /></a>
+
<a href="javascript:void(0);"><img src="http://www.science.unitn.it/~igem/img/slider/Parts1.jpg" alt="" /></a>
-
<img src="http://www.science.unitn.it/~igem/img/slider/Team2.jpg" alt="" />
+
<img src="http://www.science.unitn.it/~igem/img/slider/Parts2.jpg" alt="" />
-
<img src="http://www.science.unitn.it/~igem/img/slider/Team3.jpg" alt="" />
+
<img src="http://www.science.unitn.it/~igem/img/slider/Home6.jpg" alt="" />
-
<img src="http://www.science.unitn.it/~igem/img/slider/Team4.jpg" alt="" />
+
<img src="http://www.science.unitn.it/~igem/img/slider/Parts3.jpg" alt="" />
 +
<img src="http://www.science.unitn.it/~igem/img/slider/Parts4.jpg" alt="" />
 +
<img src="http://www.science.unitn.it/~igem/img/slider/Parts5.jpg" alt="" />
 +
<img src="http://www.science.unitn.it/~igem/img/slider/Parts6.jpg" alt="" />
</div>
</div>
</div>
</div>
Line 128: Line 187:
-
<p>Here you can find our favourite Parts and all the Parts we built. Make sure to check out our <a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2012&group=UNITN-Trento">Team Parts Page on the Registry website</a>!</p>
+
<p>Here you can find our Best Parts and all the Parts we built. Make sure to check out our <a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2012&group=UNITN-Trento">Team Parts Page on the Registry website</a>!</p>
<hr style="width: 98%;">
<hr style="width: 98%;">
-
<h2 style="text-align: center;">FAVORITES</h2>
+
<h2 style="text-align: center;">BEST PARTS</h2>
-
<div class="favPart" style="border-left: 7px solid #50aae4; padding-left: 10px;">
+
<div class="favPart" style="border-left: 7px solid #50aae4; padding-left: 10px; margin-bottom: 40px;">
<div class="star"></div>
<div class="star"></div>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030">K731030 - Inducible araC-pBAD promoter regulating M256I CysE</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030">K731030 - Inducible araC-pBAD promoter regulating M256I CysE</a></h2>
<p>A serine acetyltransferase (CysE) controlled by an arabinose inducible system. <br/>
<p>A serine acetyltransferase (CysE) controlled by an arabinose inducible system. <br/>
This is a key part in our black crust project: a device used to reduce sulfate and produce cysteine. </p>
This is a key part in our black crust project: a device used to reduce sulfate and produce cysteine. </p>
-
<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>
+
<!--<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>-->
</div>
</div>
-
<div class="favPart" style="border-left: 7px solid #67f853; padding-left: 10px;">
+
<div class="favPart" style="border-left: 7px solid #67f853; padding-left: 10px; margin-bottom: 40px;">
<div class="star"></div>
<div class="star"></div>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731400">K731400 - IPTG inducible Cysteine desulfhydrase (CysDes)</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731400">K731400 - IPTG inducible Cysteine desulfhydrase (CysDes)</a></h2>
-
<p>Our favorite BioBrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key part for the Crustaway project. This BioBrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid.</p>
+
<p>Our favorite BioBrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key part for the Crust Away project. This BioBrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid.</p>
-
<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>
+
<!--<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>-->
</div>
</div>
-
<div class="favPart" style="border-left: 7px solid #ffae00; padding-left: 10px;">
+
<div class="favPart" style="border-left: 7px solid #ffae00; padding-left: 10px; margin-bottom: 40px;">
<div class="star"></div>
<div class="star"></div>
-
<h2 class="orange"><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731721">K731721 - T7 terminator</a></h2>
+
<h2 class="orange"><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731722">K731722 - rrnB T1 terminator</a></h2>
-
<p>Our new entry in the terminator collections of the registry: a T7 terminator! This terminator was characterized in vivo and in vitro with both T7 and E. coli polymerases. </p>
+
<p>Our new entry in the terminator collection of the Registry: a functioning version of <a href="http://partsregistry.org/Part:BBa_B0010">BBa_B0010</a>! This terminator was characterized with both T7 and <i>E. coli</i> RNA polymerases. </p>
-
<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>
+
<!--<a class="button" href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030" style="text-decoration: none;">Registry Page</a>-->
</div>
</div>
 +
 +
Line 161: Line 222:
<h2 style="text-align: center;"> All Our Parts</h2>
<h2 style="text-align: center;"> All Our Parts</h2>
-
<p>Please note that many parts have been also subcloned into low copy vectors. Although these parts have note been submitted to the registry, they are available upon request. Contact us at igemtrento@gmail.com.</p>
+
<p>Please note that many parts have been also subcloned into low copy vectors. Although these parts have note been submitted to the registry, they are available upon request. Contact us at igemtrento [at] gmail [dot] com</p>
<h3>The Black Crust Enzymes</h3>
<h3>The Black Crust Enzymes</h3>
Line 167: Line 228:
<div class="Part blue">
<div class="Part blue">
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731000">K731000 CysE (Serine Acetyltransferase)</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731000">K731000 CysE (Serine Acetyltransferase)</a></h2>
-
<p>A part encoding CysE, our key enzyme in the reduction of sulfate.</p>
+
<p>A Part encoding CysE, our key enzyme in the reduction of sulfate.</p>
</div>
</div>
Line 179: Line 240:
<div class="Part blue">
<div class="Part blue">
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731020">K731020 Inducible araC-pBAD promoter regulating WT CysE</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731020">K731020 Inducible araC-pBAD promoter regulating WT CysE</a></h2>
-
<p>TA device to produce CysE upon induction with arabinose. Also available in pSB3C5.
+
<p>A device to produce CysE upon induction with arabinose. Also available in pSB3C5.
</p>
</p>
</div>
</div>
Line 185: Line 246:
<div class="Part blue" >
<div class="Part blue" >
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030">K731030 Inducible araC-pBAD promoter regulating M256I CysE</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731030">K731030 Inducible araC-pBAD promoter regulating M256I CysE</a></h2>
-
<p>A device for the production of M256I CysE controlled by an arabinose inducible cassette. This part was used for the bioremoval of the black crust from different stones samples. Also available in pSB3C5.</p>
+
<p>A device for the production of M256I CysE controlled by an arabinose inducible cassette. This Part was used for the bioremoval of the black crust from different stones samples. Also available in pSB3C5.</p>
</div>
</div>
Line 191: Line 252:
<div class="Part blue">
<div class="Part blue">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731040">K731040 Inducible araC-pBAD promoter regulating a sfGFP-tagged M256I CysE</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731040">K731040 Inducible araC-pBAD promoter regulating a sfGFP-tagged M256I CysE</a></h2>
-
<p>This is our favorite part BBa_K731030 followed by a sfGFP. The device was created by Gibson assembly.
+
<p>This is our favorite Part <a href="http://partsregistry.org/Part:BBa_K731030">BBa_K731030</a> followed by a sfGFP. Created by Gibson assembly.
</p>
</p>
Line 199: Line 260:
<div class="Part green" >
<div class="Part green" >
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731400">K731400 IPTG inducible Cysteine desulfhydrase (CysDes)</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731400">K731400 IPTG inducible Cysteine desulfhydrase (CysDes)</a></h2>
-
<p>Our favorite biobrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key part for the Crustaway project. This biobrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid. Also available in pSB4K5.</p>
+
<p>Our favorite Bi Bbrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key Part for the Crust Away project. This BioBrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid. Also available in pSB4K5.</p>
</div>
</div>
<div class="Part green">
<div class="Part green">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731480">K731480 IPTG Inducible sfGFP tagged Cysteine desulfhydrase (CysDes)</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731480">K731480 IPTG Inducible sfGFP tagged Cysteine desulfhydrase (CysDes)</a></h2>
-
<p>This is a sfGFP tagged version of our best biobrick BBa_K731400. A superfluo device created by Gibson assembly.  Also available in pSB4K5.
+
<p>This is a sfGFP tagged version of our best BioBrick BBa_K731400. A superfluo device created by Gibson assembly.  Also available in pSB4K5.
</p>
</p>
</div>
</div>
Line 214: Line 275:
<div class="Part orange">
<div class="Part orange">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731721">K731721 T7 terminator</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731721">K731721 T7 terminator</a></h2>
-
<p>our new entry in the terminator collections of the registry: a T7 terminator! This terminator was characterized in vivo and in vitro with both T7 and E. coli polymerases. </p>
+
<p>Our new entry in the terminator collections of the Registry: a T7 terminator! This terminator was characterized in vivo and in vitro with both T7 and <i>E. coli</i> polymerases. </p>
</div>
</div>
<div class="Part orange">
<div class="Part orange">
-
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731722">K731722 B0010 E. coli terminator</a></h2>
+
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731722">K731722 rrnB T1 terminator <i>E. coli</i> terminator</a></h2>
-
<p>A good working alternative for the E.coli terminator B0010. </p>
+
<p>A good working alternative for the E.coli terminator <a href="http://partsregistry.org/Part:BBa_B0010">BBa_B0010</a>. </p>
</div>  
</div>  
Line 229: Line 290:
<div class="Part orange">
<div class="Part orange">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731710">K731710 Platform for terminators analysis under the control of TAC promoter</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731710">K731710 Platform for terminators analysis under the control of TAC promoter</a></h2>
-
<p>Our great platform BBa_K731722, where T7 promoter was substituted with Ptac.</p>
+
<p>Our great platform <a href="http://partsregistry.org/Part:BBa_K731722">BBa_K731722</a>, where T7 promoter was substituted with Ptac.</p>
</div>
</div>
Line 238: Line 299:
<div class="Part orange">
<div class="Part orange">
-
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731702">K731702 BBa_K731700 with BBa_K731722 terminator (BBa_B0010)</a></h2>
+
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731702">K731702 BBa_K731700 with BBa_K731722 rrnB T1 terminator (BBa_B0010)</a></h2>
<p>A measurement device used to characterize B0010 terminator under the control of T7 promoter.</p>
<p>A measurement device used to characterize B0010 terminator under the control of T7 promoter.</p>
</div>
</div>
Line 244: Line 305:
<div class="Part orange">
<div class="Part orange">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731711">K731711 BBa_K731710 with T7 terminator (BBa_K731721)</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731711">K731711 BBa_K731710 with T7 terminator (BBa_K731721)</a></h2>
-
<p>A measurement device used to characterize the T7 terminator (BBa_K731721) under the control of tac promoter.</p>
+
<p>A measurement device used to characterize the T7 terminator (<a href="http://partsregistry.org/Part:BBa_K731721">BBa_K731721</a>) under the control of tac promoter.</p>
</div>
</div>
<div class="Part orange">
<div class="Part orange">
-
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731712">K731712 BBa_K731710 with BBa_K731722 terminator (BBa_B0010)</a></h2>
+
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731712">K731712 BBa_K731710 with BBa_K731722 rrnB T1 terminator (<a href="http://partsregistry.org/Part:BBa_B0010">BBa_B0010</a>)</a></h2>
-
<p>A measurement device used to characterize the E.coli terminator (BBa_K731722) under the control of tac promoter.</p>
+
<p>A measurement device used to characterize the E.coli terminator (<a href="http://partsregistry.org/Part:BBa_K731722">BBa_K731722</a>) under the control of tac promoter.</p>
</div>
</div>
Line 257: Line 318:
<div class="Part blue">
<div class="Part blue">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731201">K731201 Inducible araC-pBAD promoter</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731201">K731201 Inducible araC-pBAD promoter</a></h2>
-
<p>A new version of the araC-pBad promoter that was amplified from the E.coli genome. An excellent alternative to BBa_I0050.</p>
+
<p>A new version of the araC-pBad promoter that was amplified from the E.coli genome. An excellent alternative to <a href="http://partsregistry.org/Part:BBa_I0050">BBa_I0050</a>.</p>
</div>
</div>
Line 267: Line 328:
<div class="Part green">
<div class="Part green">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731500">K731500 [LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731500">K731500 [LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward</a></h2>
-
<p>Our part BBa_K731300 followed by a tac promoter and a lac operator. The perfect biobrick for those interested in expressing their gene under the control of IPTG. It will save you a lot of cloning steps! Also available in pSB4K5.
+
<p>Our Part <a href="http://partsregistry.org/Part:BBa_K731300">BBa_K731300</a> followed by a tac promoter and a lac operator. The perfect BioBrick for those interested in expressing their gene under the control of IPTG. It will save you a lot of cloning steps! Also available in pSB4K5.
</p>
</p>
</div>
</div>
Line 273: Line 334:
<div class="Part blue">
<div class="Part blue">
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731250">K731250 Inducible araC-pBAD promoter with GFPmut3b, strong RBS</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731250">K731250 Inducible araC-pBAD promoter with GFPmut3b, strong RBS</a></h2>
-
<p>A device for the characterization of our new entry araC-pBad (BBa_K731201) followed by a strong RBS and a GFPmut3b. Also available in pSB3C5.</p>
+
<p>A device for the characterization of our new entry araC-pBad (<a href="http://partsregistry.org/Part:BBa_K731201">BBa_K731201</a>) followed by a strong RBS and a GFPmut3b. Also available in pSB3C5.</p>
</div>
</div>
<div class="Part blue" >
<div class="Part blue" >
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731255">K731255 Inducible araC-pBAD promoter with GFPmut3b, weak RBS</a></h2>
<h2 ><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731255">K731255 Inducible araC-pBAD promoter with GFPmut3b, weak RBS</a></h2>
-
<p>A device for the characterization of our new entry araC-pBad (BBa_K731201) followed by a weak RBS and GFPmut3b.</p>
+
<p>A device for the characterization of our new entry araC-pBad (<a href="http://partsregistry.org/Part:BBa_K731201">BBa_K731201</a>) followed by a weak RBS and GFPmut3b.</p>
</div>
</div>
<div class="Part green">
<div class="Part green">
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731520">K731520 IPTG inducible GFPmut3b</a></h2>
<h2><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K731520">K731520 IPTG inducible GFPmut3b</a></h2>
-
<p>A device for the characterization of our new BBa_K731500 followed by a strong RBS and GFPmut3b. Also available in pSB4K5.</p>
+
<p>A device for the characterization of our new <a href="http://partsregistry.org/Part:BBa_K731500">BBa_K731500</a> followed by a strong RBS and GFPmut3b. Also available in pSB4K5.</p>
</div>
</div>
Line 332: Line 393:
-
<p>Design by Jason Fontana. Powered by <a href="http://www.mediawiki.org/wiki/MediaWiki">MediaWiki</a>. This website is under the <a href="http://creativecommons.org/licenses/by/3.0/">CC Attribution licence</a>. | <span class="toggle">Toggle controls</span></p>
+
<p>Design by Jason Fontana. Powered by <a href="http://www.mediawiki.org/wiki/MediaWiki">MediaWiki</a>. This website is under the <a href="http://creativecommons.org/licenses/by/3.0/">CC Attribution licence</a>.<!-- | <span class="toggle">Toggle controls</span>--></p>
</div>
</div>
</div>
</div>
-
<script>
+
 
-
(function() {
+
<!--<script>
-
$.ajaxSetup({cache:true});
+
-
$.getScript('http://static.tumblr.com/g8b5dgd/Jzdm1nbnz/jquery.tweet-min.js',function(){
+
-
$(".tweets").tweet({
+
-
username: "jasonfweb",
+
-
join_text: "auto",
+
-
count: 1,
+
-
auto_join_text_default: "we said,",
+
-
auto_join_text_ed: "we",
+
-
auto_join_text_ing: "we were",
+
-
auto_join_text_reply: "we replied to",
+
-
auto_join_text_url: "we were checking out",
+
-
loading_text: "Getting latest tweet..."
+
-
}).bind('loaded', function () {
+
-
$('.twitter-feed').fadeTo('fast', 1);
+
-
});
+
-
}); })();
+
-
</script>
+
-
<script>
+
(function() {
(function() {
var $mw = $('div#mw');
var $mw = $('div#mw');
Line 364: Line 407:
});
});
})();
})();
-
</script>
+
</script> -->
<script type="text/javascript">
<script type="text/javascript">

Latest revision as of 17:34, 25 September 2012

Our Parts

It appears you have JavaScript disabled. Our Wiki needs it for you to enjoy the full experience. Please enable Javascript and refresh the page.

Our Parts


Here you can find our Best Parts and all the Parts we built. Make sure to check out our Team Parts Page on the Registry website!


BEST PARTS

K731030 - Inducible araC-pBAD promoter regulating M256I CysE

A serine acetyltransferase (CysE) controlled by an arabinose inducible system.
This is a key part in our black crust project: a device used to reduce sulfate and produce cysteine.

K731400 - IPTG inducible Cysteine desulfhydrase (CysDes)

Our favorite BioBrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key part for the Crust Away project. This BioBrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid.

K731722 - rrnB T1 terminator

Our new entry in the terminator collection of the Registry: a functioning version of BBa_B0010! This terminator was characterized with both T7 and E. coli RNA polymerases.


All Our Parts

Please note that many parts have been also subcloned into low copy vectors. Although these parts have note been submitted to the registry, they are available upon request. Contact us at igemtrento [at] gmail [dot] com

The Black Crust Enzymes

K731000 CysE (Serine Acetyltransferase)

A Part encoding CysE, our key enzyme in the reduction of sulfate.

K731010 M256I CysE (Serine Acetyltransferase)

This is a mutated CysE. Introduction of a Methionine at position 256, makes our key player even "stronger" and enhances sulfate uptake.

K731020 Inducible araC-pBAD promoter regulating WT CysE

A device to produce CysE upon induction with arabinose. Also available in pSB3C5.

K731030 Inducible araC-pBAD promoter regulating M256I CysE

A device for the production of M256I CysE controlled by an arabinose inducible cassette. This Part was used for the bioremoval of the black crust from different stones samples. Also available in pSB3C5.

K731040 Inducible araC-pBAD promoter regulating a sfGFP-tagged M256I CysE

This is our favorite Part BBa_K731030 followed by a sfGFP. Created by Gibson assembly.

K731400 IPTG inducible Cysteine desulfhydrase (CysDes)

Our favorite Bi Bbrick encoding a cysteine desulfhydrase, controlled by an IPTG inducible cassette. This is the second key Part for the Crust Away project. This BioBrick produces an enzyme that uses cysteine as the substrate to form sulfidric acid. Also available in pSB4K5.

K731480 IPTG Inducible sfGFP tagged Cysteine desulfhydrase (CysDes)

This is a sfGFP tagged version of our best BioBrick BBa_K731400. A superfluo device created by Gibson assembly. Also available in pSB4K5.

Terminators

K731721 T7 terminator

Our new entry in the terminator collections of the Registry: a T7 terminator! This terminator was characterized in vivo and in vitro with both T7 and E. coli polymerases.

K731722 rrnB T1 terminator E. coli terminator

A good working alternative for the E.coli terminator BBa_B0010.

K731700 Platform for terminators analysis under the control of T7 promoter

Our measurement device for terminators characterization. A T7 promoter controlling the expression of A206K Venus and mCherry for the ratiometric analysis of terminator efficiency.

K731710 Platform for terminators analysis under the control of TAC promoter

Our great platform BBa_K731722, where T7 promoter was substituted with Ptac.

K731701 BBa_K731700 with T7terminator (BBa_K731721)

A measurement device used to characterize T7 terminator under the control of T7 promoter.

K731702 BBa_K731700 with BBa_K731722 rrnB T1 terminator (BBa_B0010)

A measurement device used to characterize B0010 terminator under the control of T7 promoter.

K731711 BBa_K731710 with T7 terminator (BBa_K731721)

A measurement device used to characterize the T7 terminator (BBa_K731721) under the control of tac promoter.

K731712 BBa_K731710 with BBa_K731722 rrnB T1 terminator (BBa_B0010)

A measurement device used to characterize the E.coli terminator (BBa_K731722) under the control of tac promoter.

Promoters

K731201 Inducible araC-pBAD promoter

A new version of the araC-pBad promoter that was amplified from the E.coli genome. An excellent alternative to BBa_I0050.

K731300 LacI + LacIq promoter (reverse)

A ready to go IPTG inducible cassette that is composed of LacI controlled by the lacIq promoter, both in the reverse direction.

K731500 [LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward

Our Part BBa_K731300 followed by a tac promoter and a lac operator. The perfect BioBrick for those interested in expressing their gene under the control of IPTG. It will save you a lot of cloning steps! Also available in pSB4K5.

K731250 Inducible araC-pBAD promoter with GFPmut3b, strong RBS

A device for the characterization of our new entry araC-pBad (BBa_K731201) followed by a strong RBS and a GFPmut3b. Also available in pSB3C5.

K731255 Inducible araC-pBAD promoter with GFPmut3b, weak RBS

A device for the characterization of our new entry araC-pBad (BBa_K731201) followed by a weak RBS and GFPmut3b.

K731520 IPTG inducible GFPmut3b

A device for the characterization of our new BBa_K731500 followed by a strong RBS and GFPmut3b. Also available in pSB4K5.