Team:SYSU-Software/v2

From 2012.igem.org

(Difference between revisions)
 
(17 intermediate revisions not shown)
Line 1: Line 1:
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+
{{:Team:SYSU-Software/menu}}
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
<head>
Line 5: Line 5:
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Style-Type" content="text/css" />
<meta http-equiv="Content-Style-Type" content="text/css" />
-
<link href="https://2011.igem.org/Team:SYSU-China/temp/style.css" rel="stylesheet" type="text/css" />
+
<link href="./style.css?action=raw&ctype=text/css" rel="stylesheet" type="text/css" >
-
<link href="./layout.css" rel="stylesheet" type="text/css" />
+
<link href="./layout.css?action=raw&ctype=text/css" rel="stylesheet" type="text/css" >
-
<script src="./js/jquery-1.4.2.min.js" type="text/javascript"></script>
+
<script src="./js/jquery-1.4.2.min.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
-
<script src="./js/jquery.faded.js" type="text/javascript"></script>
+
<script src="./js/jquery.faded.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
-
<script src="./js/tabs.js" type="text/javascript"></script>
+
<script src="./js/tabs.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
-
<script src="./js/script.js" type="text/javascript"></script>
+
<script src="./js/script.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
<!--[if lt IE 7]>
<!--[if lt IE 7]>
-
<link href="./ie_style.css" rel="stylesheet" type="text/css" />
+
<link href="./ie_style.css?action=raw&ctype=text/css" rel="stylesheet" type="text/css" />
-
   <script type="text/javascript" src="./js/ie_png.js"></script>
+
   <script type="text/javascript" src="./js/ie_png.js?action=raw&ctype=text/javascript"></script>
   <script type="text/javascript">
   <script type="text/javascript">
       ie_png.fix('.png, #header, #header .nav a, #faded strong, #faded .controls a');
       ie_png.fix('.png, #header, #header .nav a, #faded strong, #faded .controls a');
Line 30: Line 30:
           </fieldset>
           </fieldset>
         </form>
         </form>
-
         <h1><a href="#"></a>
+
         <div><a href="#"><img src="https://static.igem.org/mediawiki/igem.org/c/c9/Logo.png" alt=""  width="320px"  height="145px"/></a>
-
<img src= images/logo.png  alt=""  width="320px"  height="150px"/></h1>
+
</div>
         <!-- .nav -->
         <!-- .nav -->
         <ul class="nav">
         <ul class="nav">
              
              
-
           <li><a href="#" >Project<span>Start here</span></a></li>
+
           <li><a href="https://2012.igem.org/Team:SYSU-Software/Project" >Project<span>Start here</span></a></li>
           <li><a href="#">Team<span>Let us show you our work</span></a></li>
           <li><a href="#">Team<span>Let us show you our work</span></a></li>
           <li><a href="#">Safety<span>Get to know us a little better</span></a></li>
           <li><a href="#">Safety<span>Get to know us a little better</span></a></li>
Line 48: Line 48:
           <ul>
           <ul>
             <li>
             <li>
-
             <img src="images/slide1.jpg" alt="" />
+
             <img src="https://static.igem.org/mediawiki/2012/0/08/Slide1.jpg" alt="" />
               <strong>creative ideas</strong>
               <strong>creative ideas</strong>
               <a href="#" class="button-alt">click here</a>
               <a href="#" class="button-alt">click here</a>
             </li>
             </li>
             <li>
             <li>
-
             <img src="images/slide2.jpg" alt="" />
+
             <img src="https://static.igem.org/mediawiki/2012/7/73/Slide2.jpg" alt="" />
               <strong>best solutions</strong>
               <strong>best solutions</strong>
               <a href="#" class="button-alt">click here</a>
               <a href="#" class="button-alt">click here</a>
             </li>
             </li>
             <li>
             <li>
-
             <img src="images/slide3.jpg" alt="" />
+
             <img src="https://static.igem.org/mediawiki/2012/b/b4/Slide3.jpg" alt="" />
               <strong>global success</strong>
               <strong>global success</strong>
               <a href="#" class="button-alt">click here</a>
               <a href="#" class="button-alt">click here</a>
Line 85: Line 85:
           <div id="tab1" class="tab_content">
           <div id="tab1" class="tab_content">
             <div class="wrapper">
             <div class="wrapper">
-
               <img class="img-indent" src="images/browser.jpg" alt="" width="300px" height="230px"/>
+
               <img class="img-indent" src="https://static.igem.org/mediawiki/2012/7/7c/Browser.jpg" alt="" width="300px" height="230px"/>
                 <div class="extra-wrap">
                 <div class="extra-wrap">
                 <p>With this Genome Browser, users are able to search Biobricks, plasmids and genomes of model microorganisms; at the same time, gene annotations and information of GenBank are presented. The primary protein sequence is also presented according to the DNA sequences. Aside from searching sequences, users can also input or modify the sequences, insert annotation and build target plasmids they need.</p>
                 <p>With this Genome Browser, users are able to search Biobricks, plasmids and genomes of model microorganisms; at the same time, gene annotations and information of GenBank are presented. The primary protein sequence is also presented according to the DNA sequences. Aside from searching sequences, users can also input or modify the sequences, insert annotation and build target plasmids they need.</p>
Line 95: Line 95:
             <div id="tab2" class="tab_content">
             <div id="tab2" class="tab_content">
             <div class="wrapper">
             <div class="wrapper">
-
               <img class="img-indent" src="images/designer.jpg" alt="" width="300px" height="230px"/>
+
               <img class="img-indent" src="https://static.igem.org/mediawiki/2012/7/71/Designer.jpg" alt="" width="300px" height="230px"/>
                 <div class="extra-wrap">
                 <div class="extra-wrap">
                 <p>This part of the software focus on the design of regulatory elements of metabolic networks, mainly non-coding RNAs including SiRNA and Riboswitch. When a certain gene or protein is given, the Designer would generate the elements. What’s more, the primary and secondary structure can be predicted and presented in the Designer. The function of structure prediction can be also applied in other non-coding RNAs, for instance, microRNAs.</p>
                 <p>This part of the software focus on the design of regulatory elements of metabolic networks, mainly non-coding RNAs including SiRNA and Riboswitch. When a certain gene or protein is given, the Designer would generate the elements. What’s more, the primary and secondary structure can be predicted and presented in the Designer. The function of structure prediction can be also applied in other non-coding RNAs, for instance, microRNAs.</p>
Line 105: Line 105:
             <div id="tab3" class="tab_content">
             <div id="tab3" class="tab_content">
             <div class="wrapper">
             <div class="wrapper">
-
               <img class="img-indent" src="images/illustrator.jpg" alt="" width="300px" height="230px" />
+
               <img class="img-indent" src="https://static.igem.org/mediawiki/2012/8/8f/Illustrator.jpg" alt="" width="300px" height="230px" />
                 <div class="extra-wrap">
                 <div class="extra-wrap">
                 <p>Relying on the KEGG Pathway database, the Illustrator exports the optimized relevant pathway map of a gene or transcription factor the user interests in.  </p>
                 <p>Relying on the KEGG Pathway database, the Illustrator exports the optimized relevant pathway map of a gene or transcription factor the user interests in.  </p>
Line 114: Line 114:
             <div id="tab4" class="tab_content">
             <div id="tab4" class="tab_content">
             <div class="wrapper">
             <div class="wrapper">
-
             <img class="img-indent" src="images/simulator.jpg" alt="" width="300px" height="230px" />
+
             <img class="img-indent" src="https://static.igem.org/mediawiki/2012/5/55/Simulator.jpg" alt="" width="300px" height="230px" />
               <div class="extra-wrap">
               <div class="extra-wrap">
               <p>Simulator is a tool to analyze target metabolic network in method of flux balance analysis (FBA). The Simulator would help researchers rebuild the metabolic network and search key genes in the network, in order to simplify the synthesis design. Relying on the KEGG Pathway database, a novel rFBA model is formed when regulation-relevant conditions are added into the primitive FBA model, which would help the researchers observe the dynamic change in the metabolic system. Moreover, unlike the mainstream of FBA, the analysis of the Simulator is not based on Matlab and is more convenient for researchers to use.</p>
               <p>Simulator is a tool to analyze target metabolic network in method of flux balance analysis (FBA). The Simulator would help researchers rebuild the metabolic network and search key genes in the network, in order to simplify the synthesis design. Relying on the KEGG Pathway database, a novel rFBA model is formed when regulation-relevant conditions are added into the primitive FBA model, which would help the researchers observe the dynamic change in the metabolic system. Moreover, unlike the mainstream of FBA, the analysis of the Simulator is not based on Matlab and is more convenient for researchers to use.</p>
Line 132: Line 132:
                   <div class="wrapper line-ver1">
                   <div class="wrapper line-ver1">
                     <div class="col-1">
                     <div class="col-1">
-
                       <h2>Solutions</h2>
+
                       <h2>Project</h2>
                       <ul class="list1">
                       <ul class="list1">
                         <li><a href="#">Management Consulting</a></li>
                         <li><a href="#">Management Consulting</a></li>
Line 144: Line 144:
                     </div>
                     </div>
                     <div class="col-2">
                     <div class="col-2">
-
                       <h2>Products</h2>
+
                       <h2><span lang="zh-cn">Safety</span></h2>
                       <ul class="products-list">
                       <ul class="products-list">
                       <li>
                       <li>
-
                           <img src="images/icon1.jpg" alt="" />
+
                           <img src="https://static.igem.org/mediawiki/2012/c/cf/Icon1.jpg" alt="" />
                           <div class="extra-wrap">
                           <div class="extra-wrap">
                             <p>Lorem ipsum dolor sit Amet consec tetuer adipiscing elit</p>
                             <p>Lorem ipsum dolor sit Amet consec tetuer adipiscing elit</p>
Line 154: Line 154:
                         </li>
                         </li>
                         <li class="last">
                         <li class="last">
-
                           <img src="images/icon2.jpg" alt="" />
+
                           <img src="https://static.igem.org/mediawiki/2012/0/00/Icon2.jpg" alt="" />
                           <div class="extra-wrap">
                           <div class="extra-wrap">
-
                             <p>Lorem ipsum dolor sit Amet consec tetuer adipiscing elit</p>
+
                             <p>Our notebook shows you the schedule we developed this project.</p>
                             <div class="wrapper"><a href="#" class="link1"><b>read more</b></a></div>
                             <div class="wrapper"><a href="#" class="link1"><b>read more</b></a></div>
                           </div>
                           </div>
Line 163: Line 163:
                     </div>
                     </div>
                     <div class="col-3">
                     <div class="col-3">
-
                       <h2>Contact us</h2>
+
                       <h2>About us</h2>
-
                       <p>Lorem ipsum dolor sit amet, consec tetuer adipiscing elit. Praesent vestibu- lum mo lestie lacus</p>
+
                       <p>We are from Sun Yet-Sen University,which is locate in southern China.  
-
                      <p>Aenean nonummy hendrerit mauris. Phasellus porta. Fusce suscipit varius mi. Cum sociis natoque penatibuset magnis dis parturient montes, nascetur ridiculus mus. Nulla dui. Fusce feugiat malesuada odio</p>
+
                    </p>
                       <div class="wrapper"><a href="#" class="link1"><b>read more</b></a></div>
                       <div class="wrapper"><a href="#" class="link1"><b>read more</b></a></div>
                     </div>
                     </div>
Line 177: Line 177:
         <!-- .banners -->
         <!-- .banners -->
         <ul class="banners">
         <ul class="banners">
-
         <li><a href="#"><img src="images/banner1.gif" alt="" /></a></li>
+
         <li><a href="#"><img src="https://static.igem.org/mediawiki/2012/d/d2/Banner1.gif" alt="" /></a></li>
-
           <li><a href="#"><img src="images/banner2.gif" alt="" /></a></li>
+
           <li><a href="#"><img src="https://static.igem.org/mediawiki/2012/f/fd/Banner2.gif" alt="" /></a></li>
-
           <li><a href="#"><img src="images/banner3.gif" alt="" /></a></li>
+
           <li><a href="#"><img src="https://static.igem.org/mediawiki/2012/f/fb/Banner3.gif" alt="" /></a></li>
-
           <li class="last"><a href="#"><img src="images/banner4.gif" alt="" /></a></li>
+
           <li class="last"><a href="#"><img src="https://static.igem.org/mediawiki/2012/5/5b/Banner4.gif" alt="" /></a></li>
         </ul>
         </ul>
         <!-- /.banners -->
         <!-- /.banners -->
Line 186: Line 186:
       <!-- footer -->
       <!-- footer -->
       <div id="footer">
       <div id="footer">
-
       Genrich &copy; 2010 | <a href="#">Privacy Policy</a>
+
      
       </div>
       </div>
     </div>
     </div>

Latest revision as of 12:06, 22 September 2012

Team:SYSU-Software

With this Genome Browser, users are able to search Biobricks, plasmids and genomes of model microorganisms; at the same time, gene annotations and information of GenBank are presented. The primary protein sequence is also presented according to the DNA sequences. Aside from searching sequences, users can also input or modify the sequences, insert annotation and build target plasmids they need.

This part of the software focus on the design of regulatory elements of metabolic networks, mainly non-coding RNAs including SiRNA and Riboswitch. When a certain gene or protein is given, the Designer would generate the elements. What’s more, the primary and secondary structure can be predicted and presented in the Designer. The function of structure prediction can be also applied in other non-coding RNAs, for instance, microRNAs.

Relying on the KEGG Pathway database, the Illustrator exports the optimized relevant pathway map of a gene or transcription factor the user interests in.

Simulator is a tool to analyze target metabolic network in method of flux balance analysis (FBA). The Simulator would help researchers rebuild the metabolic network and search key genes in the network, in order to simplify the synthesis design. Relying on the KEGG Pathway database, a novel rFBA model is formed when regulation-relevant conditions are added into the primitive FBA model, which would help the researchers observe the dynamic change in the metabolic system. Moreover, unlike the mainstream of FBA, the analysis of the Simulator is not based on Matlab and is more convenient for researchers to use.

read more

Safety

  • Lorem ipsum dolor sit Amet consec tetuer adipiscing elit

  • Our notebook shows you the schedule we developed this project.

About us

We are from Sun Yet-Sen University,which is locate in southern China.