Team:UC Davis

From 2012.igem.org

(Difference between revisions)
 
(55 intermediate revisions not shown)
Line 80: Line 80:
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/forum/forum_styles.css" />
         <link rel="stylesheet" type="text/css" href="https://2012.igem.org/forum/forum_styles.css" />
<script type="text/javascript"        src ="https://2012.igem.org/forum/forum_scripts.js"></script>
<script type="text/javascript"        src ="https://2012.igem.org/forum/forum_scripts.js"></script>
 +
<!-- slide script starts here -->
<!-- slide script starts here -->
Line 87: Line 88:
     if ( $current.length == 0 ) $current = $('#slides IMG:last');
     if ( $current.length == 0 ) $current = $('#slides IMG:last');
-
 
     var $next =  $current.next().length ? $current.next()
     var $next =  $current.next().length ? $current.next()
         : $('#slides IMG:first');
         : $('#slides IMG:first');
-
   
 
-
    var $n_sibs  = $current.siblings();
 
-
    var rndNum = Math.floor(Math.random() * $n_sibs.length );
 
-
    var $next  = $( $n_sibs[ rndNum ] );
 
-
 
-
    $current.addClass('previous');
 
 +
      $current.addClass('previous');
     $next.css({opacity: 0.0})
     $next.css({opacity: 0.0})
         .addClass('current')
         .addClass('current')
Line 102: Line 97:
             $current.removeClass('current previous');
             $current.removeClass('current previous');
         });
         });
 +
 +
var $navicurrent = $('.progress li.current');
 +
if($navicurrent.length ==0) $navicurrent = $('.progress li:last');
 +
var $navinext = $navicurrent.next().length ? $navicurrent.next() : $('.progress li:first');
 +
$navicurrent.addClass('previous');
 +
$navicurrent.removeClass('current previous');
 +
$navinext.addClass('current').animate({opacity: 1.0}, 2500, function() {
 +
        });
 +
 +
$('.progress li').click(function(){
 +
   
 +
var $ncurrent = $(this);
 +
        $('.progress li').removeClass('current').removeClass('previous');
 +
        $('#slides IMG').removeClass('current').removeClass('previous');
 +
        $ncurrent.addClass('current');
 +
        var ncurrentindex = $ncurrent.index();
 +
if(  ncurrentindex=== 0) $current = $('#slides IMG:first');
 +
        if(  ncurrentindex=== 1) $current = $('#slides IMG:eq(1)');
 +
        if(  ncurrentindex=== 2) $current = $('#slides IMG:eq(2)');
 +
        if(  ncurrentindex=== 3) $current = $('#slides IMG:last');
 +
        $current.addClass('current');
 +
 +
});
 +
}
}
$(function() {
$(function() {
Line 108: Line 127:
</script>
</script>
 +
 +
</script>
<!-- slide script ends here -->
<!-- slide script ends here -->
Line 134: Line 155:
#menubar.right-menu { width:300px; display:block; float:left; margin-top:-80px; border: none;}
#menubar.right-menu { width:300px; display:block; float:left; margin-top:-80px; border: none;}
.right-menu ul { border: none; width: 300px;}
.right-menu ul { border: none; width: 300px;}
-
#footer-box { background-color: #216085; border: none; width: 100%; height: 100%; margin: -10px auto 0 auto; padding: 20px 0;}
+
#footer-box { background-color: #216085; border: none; width: 850px; height: 30px; margin: -10px auto 0 auto; padding: 20px 0;}
.visualClear { display: none; }
.visualClear { display: none; }
#footer { border: none; width: 850px; margin: 0 auto; padding: 0;}
#footer { border: none; width: 850px; margin: 0 auto; padding: 0;}
Line 146: Line 167:
h3#siteSub { display: none;}
h3#siteSub { display: none;}
#contentSub {display: none;}
#contentSub {display: none;}
-
p:first-child { display: none;}
+
p:first-child { display: block;}
h1{border:none; width: 100%; clear: both;}
h1{border:none; width: 100%; clear: both;}
 +
<!-- end of slides style -->
<!-- end of slides style -->
-
body {
 
-
    background-color: #ffffff;
 
-
    color: black;
 
-
    font: x-small sans-serif;
 
-
    margin: 0;
 
-
    padding: 0;
 
-
    height:100%;
 
-
#    height:auto !important;
 
-
}
 
#globalWrapper {
#globalWrapper {
     position: relative;
     position: relative;
     font-size: 127%;
     font-size: 127%;
-
     width: 100%;
+
     width: 850px //100%;
     margin: 0;
     margin: 0;
     padding: 0;
     padding: 0;
     padding-bottom: 10px;
     padding-bottom: 10px;
-
    background-color: #ffffff;
+
#    background:url(https://static.igem.org/mediawiki/2012/c/cc/UCD_Bg_1.jpg);
-
#   height:100%;
+
#    background-repeat: no-repeat;
-
 
+
#   background-attachment: fixed;
 +
#   background-size:100% auto;
}
}
Line 177: Line 191:
     margin: 0 auto;
     margin: 0 auto;
     padding: 5px 5px 5px 5px;;
     padding: 5px 5px 5px 5px;;
-
     background: white;
+
     background: transparent;
     color: black;
     color: black;
-
    border-left: 1px solid #ffffff;
+
#    border-left: 1px solid #ffffff;
-
    border-right: 1px solid #ffffff;
+
#    border-right: 1px solid #ffffff;
-
    line-height: 1.5em;
+
#    line-height: 1.5em;
-
#    z-index: 2;
+
}
}
 +
 +
 +
body {
 +
display:inherit;
 +
background-color: rgba(255,255,255,1);
 +
background-image: url('https://static.igem.org/mediawiki/2012/c/cc/UCD_Bg_1.jpg');
 +
background-size: 100%;
 +
background-repeat: no-repeat;
 +
background-attachment:fixed;
 +
 +
    color: black;
 +
    font: x-small sans-serif;
 +
    margin: 0;
 +
    padding: 0;
 +
#    height:100%;
 +
}
 +
#topmenubar {
#topmenubar {
Line 239: Line 269:
         position:relative;
         position:relative;
         height:42px;
         height:42px;
-
         width: 856px;
+
         width: 850px;
         margin-left: -2px;
         margin-left: -2px;
         display:block;
         display:block;
Line 248: Line 278:
         overflow:hidden;
         overflow:hidden;
         padding:0px;  
         padding:0px;  
-
         margin:0px;  
+
         margin:2px solid transparent;  
         list-style-type:none;  
         list-style-type:none;  
         height:24px;
         height:24px;
 +
        width: 107px;
         list-style-image:none;
         list-style-image:none;
-
         background:#004b85;
+
         background: #004b85;
}
}
#newnavi .newmenu li    {
#newnavi .newmenu li    {
         float:right;  
         float:right;  
-
        height:24px;
+
         background: #004b85;
-
        width: 103px;
+
         text-align:center;
-
         background:#004b85;
+
-
         border-left: solid 2px white;
+
-
        border-right: solid 2px white;
+
}
}
#newnavi .newmenu .selected {
#newnavi .newmenu .selected {
Line 266: Line 294:
}
}
#newnavi .newmenu li a  {
#newnavi .newmenu li a  {
-
text-align:center; vertical-align:middle; width:82px; padding:5px 10px 5px 10px; display:block; color:#fff; text-decoration:none; font:14px arial, verdana, sans-serif; font-weight: bold;
+
text-align:center; vertical-align:middle; width:86px; padding:5px 10px 5px 10px; display:block; color:#fff; text-decoration:none; font:14px arial, verdana, sans-serif; font-weight: bold;
}
}
#newnavi .newmenu li:hover a {
#newnavi .newmenu li:hover a {
Line 272: Line 300:
}
}
#newnavi .newmenu ul    {
#newnavi .newmenu ul    {
-
position:absolute; left:-9999px; top:-9999px; list-style-type:none; list-style-image:none; margin:0px; border:0px; padding:0px; background:lavender;
+
position:absolute; left:-9999px; top:-9999px; list-style-type:none; list-style-image:none; margin:0px; border:0px; padding:0px; background: #05bcea;
}
}
#newnavi .newmenu li:hover      {
#newnavi .newmenu li:hover      {
Line 278: Line 306:
}
}
#newnavi .newmenu li:hover ul  {
#newnavi .newmenu li:hover ul  {
-
left:0px; top:23px; background:lavender;  width:103px; opacity:0.7; z-index:4;
+
left:0px; top:26px; background: #05bcea;  width:150px; opacity:1.0 ; z-index:4;
}
}
#newnavi .newmenu li:hover ul li        {
#newnavi .newmenu li:hover ul li        {
-
         height:17px;
+
          
-
        border:none;
+
         background: #05bcea;
-
         background:lavender;
+
}
}
#newnavi .newmenu li:hover ul li a      {
#newnavi .newmenu li:hover ul li a      {
-
text-align:center; height:17px; padding:0px;display:block; font-size:12px; width:103px; line-height:16px; text-indent:0px; color:#444;  
+
text-align:left; padding:5px 0px 5px 0px;display:block; font-size:12px; width:150px; text-indent:10px; color:#444;  
-
background-color:transparent; text-decoration:none; border:0px solid transparent;       
+
background-color: #05bcea; text-decoration:none;       
}
}
#newnavi .newmenu li:hover ul li a:hover {
#newnavi .newmenu li:hover ul li a:hover {
-
height:18px; background:silver; color:#000; border:solid 0px #444;       
+
background: #05bcea; color:#ffffff; width:150px;       
}
}
-
/* slide starts here */
+
 
 +
 
 +
#newnavi .newmenu li ul li ul {
 +
        height:40px;
 +
        left:299px;
 +
        top:-26px;
 +
        margin: 0;
 +
padding: 0;
 +
list-style: none;
 +
width: 150px;
 +
        position:absolute;
 +
display:none;
 +
}
 +
 
 +
#newnavi .newmenu li ul li ul li {
 +
position:relative;
 +
background: #05bcea;
 +
width: 150px;
 +
}
 +
 
 +
#newnavi .newmenu li ul li ul li a {
 +
 
 +
padding:5px 0px 5px 0px;display:block; font-size:12px; width:100px; text-indent:10px; color:#444;
 +
background-color: #05bcea; text-decoration:none;
 +
}
 +
 
 +
#newnavi .newmenu li ul li:hover ul {
 +
display:block;
 +
color:#ffffff;
 +
width:150px;
 +
background:transparent;
 +
}
 +
 
 +
#newnavi .newmenu li ul li:hover ul li {
 +
top:-25px;
 +
left:150px;
 +
margin-bottom:-1px;
 +
height:26px;
 +
}
 +
 
 +
#newnavi .newmenu li ul li:hover ul li a {
 +
 
 +
padding:5px 0px 5px 0px;display:block; font-size:12px; text-indent:10px; color:#444;
 +
background-color: #05bcea; text-decoration:none;border:0px solid;
 +
}
 +
 
#slides {
#slides {
     position:relative;
     position:relative;
-
     height:350px;
+
     height:280px;
     width: 840px
     width: 840px
      
      
Line 316: Line 388:
     z-index:2;
     z-index:2;
}
}
 +
 +
.progress {
 +
 +
margin-top:-270px;
 +
margin-left:20px;
 +
position:absolute;
 +
 +
}
 +
 +
.progress li{
 +
border:1px solid rgba(0,0,0,0.9);
 +
border-radius:3px;
 +
margin-left: 5px;
 +
float:left;
 +
display:block;
 +
position:relative;
 +
z-index:10;
 +
background-color:rgba(255,255,255,0.4);
 +
  line-height:1.0em;
 +
}
 +
 +
.progress li a{
 +
    padding-left: 6px;
 +
    padding-right: 6px;
 +
    font-size:12px;
 +
   line-height:1.0em;
 +
}
 +
 +
.progress li a:hover {
 +
text-decoration:none;
 +
}
 +
 +
.progress .current {
 +
background-color:white;
 +
}
 +
/* slide ends here */
/* slide ends here */
 +
//leftbox, rightbox starts here
 +
 +
#myleftrightbox
 +
{
 +
position:relative;
 +
width:850px;
 +
float:left;
 +
background-color:#d2d2d2;
 +
margin-top: 0px;
 +
margin-left:3.75px solid transparent;
 +
margin-right:3.75px solid transparent;
 +
border-radius: 4px;
 +
padding: 0px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
margin-left:3.75px solid #e8eff1;
 +
margin-right:3.75px solid #e8eff1;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
 +
 +
#myleftrightbox .fourboxes-1
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
margin-left:3.75px solid #e8eff1;
 +
margin-right:3.75px solid #e8eff1;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes-2
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
margin-left:3.75px solid #e8eff1;
 +
margin-right:3.75px solid #e8eff1;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes-3
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
margin-left:3.75px solid #105ec5;
 +
margin-right:3.75px solid #105ec5;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes-4
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
margin-left:3.75px solid #05bcea;
 +
margin-right:3.75px solid #05bcea;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes-1:hover {
 +
background-color:green;
 +
}
 +
#myleftrightbox .fourboxes-2:hover {
 +
background-color:orange;
 +
}
 +
#myleftrightbox .fourboxes-3:hover {
 +
background-color:#105ec5;
 +
}
 +
#myleftrightbox .fourboxes-4:hover {
 +
background-color:#05bcea;
 +
}
 +
 +
#myleftrightbox .fourboxes2
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
margin-left:3.75px solid #e8eff1;
 +
margin-right:3.75px solid #e8eff1;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes2-1
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
margin-left:3.75px solid #6a6a6a;
 +
margin-right:3.75px solid #6a6a6a;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes2-2
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
margin-left:3.75px solid #ff8a00;
 +
margin-right:3.75px solid #ff8a00;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes2-3
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
margin-left:3.75px solid #03d557;
 +
margin-right:3.75px solid #03d557;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes2-4
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
margin-left:3.75px solid #ff8a00;
 +
margin-right:3.75px solid #ff8a00;
 +
margin-bottom:0px;
 +
border-radius: 4px;
 +
padding: 8.5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftrightbox .fourboxes2-1:hover {
 +
background-color:#6a6a6a;
 +
}
 +
 +
#myleftrightbox .fourboxes2-2:hover {
 +
background-color:#ff8a00;
 +
}
 +
 +
#myleftrightbox .fourboxes2-3:hover {
 +
background-color:#323947;
 +
}
 +
 +
#myleftrightbox .fourboxes2-4:hover {
 +
background-color:#4a4a4a;
 +
}
 +
 +
#myleftrightbox .spacebox
 +
{
 +
float:left;
 +
width:5px;
 +
 +
}
 +
#myleftbox
 +
{
 +
position:relative;
 +
width:625px;
 +
float:left;
 +
background-color:;
 +
margin-top: 0px;
 +
border-radius: 4px;
 +
padding: 0px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
#myleftbox .smallbox
 +
{
 +
width:604px;
 +
float:left;
 +
background-color:#bfbfbf;
 +
margin-top: 15px;
 +
border-radius: 4px;
 +
padding: 15px 15px 15px 15px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
line-height:1.5em;
 +
color:black;
 +
}
 +
#myleftbox .smallbox h1
 +
{
 +
color:#004b85;
 +
font-weight:bold;
 +
}
 +
#myleftbox .smallbox p
 +
{
 +
color: #004b85;
 +
font-weight:bold;
 +
}
 +
#myleftbox .smallboxsite
 +
{
 +
width:604px;
 +
float:left;
 +
background-color:rgba(191,191,191,0.6 );
 +
margin-top: 17px;
 +
border-radius: 4px;
 +
padding: 15px 15px 15px 15px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
line-height:1.5em;
 +
color:black;
 +
 +
}
 +
#myleftbox .threeboxes
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 15px;
 +
border-radius: 4px;
 +
border-left:2px solid #e8eff1;
 +
border-right:2px solid #e8eff1;
 +
padding: 7px 7px 7px 7px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftbox .threeboxes2
 +
{
 +
width:191px;
 +
float:left;
 +
background-color:rgba(143,143,143,0.7);
 +
margin-top: 5px;
 +
border-radius: 4px;
 +
border-left:2px solid #e8eff1;
 +
border-right:2px solid #e8eff1;
 +
padding: 7px 7px 7px 7px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftbox .threeleft
 +
{
 +
width:175px;
 +
float:left;
 +
background-color:#ba9108;
 +
margin-top: -52px;
 +
border-radius: 4px;
 +
padding: 15px 15px 15px 15px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
#myleftbox .threecenter
 +
{
 +
width:175px;
 +
#float:left;
 +
background-color:#ba9108;
 +
margin-top: -52px;
 +
border-radius: 4px;
 +
padding: 15px 15px 15px 15px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
#myleftbox .threeright
 +
{
 +
width:175px;
 +
float:right;
 +
background-color:#ba9108;
 +
margin-top: -52px;
 +
border-radius: 4px;
 +
padding: 15px 15px 15px 15px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: white;
 +
}
 +
 +
 +
 +
#sponsorbox
 +
{
 +
position: relative;
 +
width: 208px;
 +
margin-top:15px;
 +
float: right;
 +
height: auto;
 +
}
 +
 +
#sponsorbox .sponsorfloat
 +
{
 +
left:-3px;
 +
width:198px;
 +
float: right;
 +
background-color: #004b85;
 +
margin-top: 0px;
 +
margin-bottom:5px;
 +
border-radius: 4px;
 +
padding: 5px 5px 5px 5px;
 +
font: sans-serif;
 +
font-size: 13px;
 +
color: rgba(225,225,225,1);
 +
}
 +
 +
#sponsorbox .sponsorfloat h2
 +
{
 +
#color:#ba9108;
 +
color:white;
 +
font-size:130%;
 +
}
 +
//leftbox, rightbox ends here
 +
 +
#sponsorbox .sponsorfloat a
 +
{
 +
color:white;
 +
font: sans-serif;
 +
}
 +
 +
#sponsorbox .sponsorfloat p
 +
{
 +
font: sans-serif;
 +
}
 +
.newsAnnouncement
 +
{
 +
width:205px;
 +
height:110px;
 +
overflow-x:hidden;
 +
overflow-y:scroll;
 +
}
 +
.floatbox3
.floatbox3
{
{
Line 335: Line 828:
font-weight:bold;
font-weight:bold;
font-size: 40px;
font-size: 40px;
-
color: #004b85;;
+
color: #016D8B;;
left:10px;
left:10px;
}
}
Line 342: Line 835:
font-size: 20px;
font-size: 20px;
font-weight: bold;
font-weight: bold;
-
color: #004b85;
+
color: #016D8B;
}
}
Line 363: Line 856:
     padding: 0 .0em;}
     padding: 0 .0em;}
-
 
+
#catlinks {
 +
background-color:transparent;
 +
border:1px solid transparent;
 +
}
 +
#footpage {
 +
background-color:transparent;
 +
}
 +
#footer-box {
 +
background-color:rgba(191,191,191,0.5);
 +
}
#footer-box-1 {
#footer-box-1 {
          
          
Line 373: Line 875:
}
}
 +
#tweets {
 +
    width: 203px;
 +
    margin: 0 auto;
 +
    font: sans-serif;
 +
    font-size: 12px;
 +
}
 +
 +
#tweets .twtr-widget,
 +
#tweets .twtr-doc {
 +
 +
    width: 100%;
 +
    height: auto;
 +
}
 +
 +
#tweets .twtr-hd {
 +
    display:none;
 +
    background: #d40;
 +
    color: #fff;
 +
    -moz-border-radius: 4px 4px 0 0;
 +
    border-radius: 4px 4px 0 0;
 +
    font-family: sans-serif !important;
 +
    }
 +
 +
#tweets .twtr-hd *,
 +
#tweets .twtr-hd h4 a {
 +
 +
    background: #d40 !important;
 +
    font: sans-serif !important;
 +
}
 +
 +
#tweets .twtr-hd h3,
 +
#tweets .twtr-hd h4 {
 +
 +
    font-weight: normal;
 +
    text-align: left;
 +
    margin:0;
 +
}
 +
 +
#tweets .twtr-hd h3 {
 +
       
 +
    background: #fff !important;
 +
    color: #333 !important;
 +
    font: sans-serif;
 +
    font-size: 1.0em !important;
 +
    padding: 0.2em !important;
 +
    -moz-border-radius: 0px;
 +
    border-radius: 0px;
 +
 +
}
 +
 +
#tweets .twtr-tweet {
 +
 +
    background: #fff;
 +
    font: sans-serif !important;
 +
    font-size: 12px;
 +
}
 +
 +
#tweets .twtr-tweet a:link,
 +
#tweets .twtr-tweet a:visited,
 +
#tweets .twtr-tweet a:hover {
 +
 +
    color: #c40 !important;
 +
 +
}
 +
 +
#tweets .twtr-tweet .twtr-tweet-text {
 +
 +
    border-bottom: 1px dashed #666 !important;
 +
    padding-bottom: 4px !important;
 +
    font: sans-serif;
 +
    font-size:12px;
 +
}
 +
 +
#tweets .twtr-tweet .twtr-tweet-text p {
 +
 +
    color: #333 !important;
 +
    font: sans-serif;
 +
    font-size: 12px;
 +
 +
}
 +
//twitt style ends here
</style>
</style>
Line 400: Line 983:
   <div id="newnavi">
   <div id="newnavi">
     <ul class="newmenu">
     <ul class="newmenu">
-
        <li ><a href="https://2012.igem.org/" title="Back to iGEM">iGEM</a></li>
+
    <li ><a target="new" href="https://2012.igem.org/" title="Back to iGEM">iGEM</a>
 +
          <ul>
 +
          <li><a target="new" href="https://2012.igem.org/">Main iGEM</a></li>
 +
          <li><a
 +
href="https://2012.igem.org/Team:UC_Davis/Criteria">Criteria</a></li>
 +
          <li><a
 +
href="https://2012.igem.org/Team:UC_Davis/Human_Practices">Human
 +
Practices</a></li>
 +
          </ul>
 +
        </li>
-
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Attributions" title="Attributions">Attributions</a></li>
+
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Attributions"
 +
title="Attributions">Attributions</a></li>
-
         <li ><a href="https://2012.igem.org/Team:UC_Davis/SourceData" title="Source Data">Source Data</a>
+
         <li ><a title="https://2012.igem.org/Team:UC_Davis/Data"
 +
title="Data">Data</a>
           <ul>
           <ul>
-
             <li ><a href="./Data.htm ">Data 1</a></li>
+
             <li ><a
-
             <li ><a href="./Data.htm ">Data 2</a></li>
+
href="https://2012.igem.org/Team:UC_Davis/Data/Cutinase_Activity"
-
            <li ><a href="./Data.htm ">Data 3</a></li>
+
title="Data">Cutinase Activity</a></li>
-
        </ul>
+
             <li ><a
 +
href="https://2012.igem.org/Team:UC_Davis/Data/Ethylene_Glycol"
 +
title="Data">Ethylene Glycol</a></li>
 +
<li ><a
 +
href="https://2012.igem.org/Team:UC_Davis/Data/Modeling"
 +
title="Data">Modeling</a></li>
 +
            <li ><a
 +
href="https://2012.igem.org/Team:UC_Davis/Parts">Parts</a></li>
 +
          </ul>
         </li>
         </li>
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook" title="Notebook">Notebook</a>
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook" title="Notebook">Notebook</a>
           <ul>
           <ul>
-
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook/Protocols">Protocols</a></li>
+
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook">Notebook</a></li>
-
             <li ><a href="./Notebook.htm ">Week 1</a></li>
+
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook/Protocols ">Protocols</a></li>
-
             <li ><a href="./Notebook.htm ">Week 2</a></li>
+
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Notebook/Gallery">Gallery</a></li>
-
            <li ><a href="./Notebook.htm ">Week 3</a></li>
+
           </ul>
           </ul>
         </li>
         </li>
Line 422: Line 1,023:
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Safety" title="Safety">Safety</a></li>
         <li ><a href="https://2012.igem.org/Team:UC_Davis/Safety" title="Safety">Safety</a></li>
-
                <li><a href="https://2012.igem.org/Team:UC_Davis/Project" title="Project">Project</a>
+
        <li ><a href="https://2012.igem.org/Team:UC_Davis/Project" title="Project">Project</a>
           <ul>
           <ul>
-
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project/Strain">Strain</a></li>
+
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project">Project Overview</a></li>
-
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project/Catalyst">Catalyst</a></li>
+
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project/Catalyst">Module Engineering</a></li>
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project/Protein_Engineering">Protein Engineering</a></li>
             <li ><a href="https://2012.igem.org/Team:UC_Davis/Project/Protein_Engineering">Protein Engineering</a></li>
 +
            <li ><a title="https://2012.igem.org/Team:UC_Davis/Project/Strain">Chassis Engineering </a>
 +
  <ul>
 +
                <li><a href="https://2012.igem.org/Team:UC_Davis/Project/Strain">Background</a></li>
 +
        <li><a href="https://2012.igem.org/Team:UC_Davis/Project/Directed_Evolution">Directed Evolution</a></li>
 +
                <li><a href="https://2012.igem.org/Team:UC_Davis/Project/Our_Strain">Rational Engineering </a></li>
 +
</ul>
 +
</li>
           </ul>
           </ul>
         </li>
         </li>
Line 436: Line 1,044:
<div id="slides">
<div id="slides">
-
     <img src="http://img.photobucket.com/albums/v26/bluemelon/slide-1-1.jpg" width="850" height="349" alt="" class="current" />
+
     <img src="https://static.igem.org/mediawiki/2012/c/cf/UCD_slide1.jpg" width="850" height="280" alt="" class="current" />
-
     <img src="http://img.photobucket.com/albums/v26/bluemelon/slide-2-1.jpg" width="850" height="349" alt="" />
+
     <img src="https://static.igem.org/mediawiki/2012/e/e3/UCD_Slide_2.jpg" width="850" height="280" alt="" />
-
     <img src="http://img.photobucket.com/albums/v26/bluemelon/slide-3-1.jpg" width="850" height="349" alt="" />
+
     <img src="https://static.igem.org/mediawiki/2012/d/d9/UCD_Slide_3.jpg" width="850" height="280" alt="" />
-
     <img src="http://img.photobucket.com/albums/v26/bluemelon/slide-4-1.jpg" width="850" height="349" alt="" />
+
     <img src="https://static.igem.org/mediawiki/2012/a/a4/UCD_Slide_4.jpg" width="850" height="280" alt="" />
-
+
</div>
</div>
 +
    <ul class="progress">
 +
<li class="current"><a href="#n_0">1</a> </li>
 +
<li><a href="#n_1">2</a> </li>
 +
        <li><a href="#n_2">3</a> </li>
 +
        <li><a href="#n_3">4</a> </li>
 +
    </ul>
<!-- slide show ends here -->  
<!-- slide show ends here -->  
-
  <div id="bodyContent">  
+
<div id="bodyContent">
-
            <div id="contentSub"></div>
+
<!--  <div id="contentSub"></div> -->
-
<br>
+
<!--  </div> -->
-
  <div class="floatbox3">
+
<!-- float: right; first try -->
 +
<!-- 1st row four boxes starts here -->
 +
<div id="myleftrightbox">
 +
<div id="myleftrightbox"  class="fourboxes-1">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Project"><img src="https://static.igem.org/mediawiki/2012/7/73/UCD_project_small_banner.jpg
 +
"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes-2">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Project/Catalyst"><img src="https://static.igem.org/mediawiki/2012/5/55/UCD_modular_small_banner.jpg
 +
"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes-3">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Project/Strain"><img src="https://static.igem.org/mediawiki/2012/e/ec/UCD_chassis_small_banner.jpg
 +
"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes-4">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Project/Protein_Engineering"><img src="https://static.igem.org/mediawiki/2012/f/ff/UCD_protein_small_banner.jpg
 +
"></a>
 +
</div>
 +
</div>
 +
<!-- 1st row four boxes ends here -->
 +
<!-- 2nd row four boxes ends here -->
 +
<div id="myleftrightbox">
 +
<div id="myleftrightbox"  class="fourboxes2-1">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Data/Cutinase_Activity"><img src="https://static.igem.org/mediawiki/2012/d/da/UCD_data_small_banner.jpg"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes2-2">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Notebook"><img src="https://static.igem.org/mediawiki/2012/2/24/UCD_notebook_small_banner.jpg"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes2-3">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Parts"><img src="https://static.igem.org/mediawiki/2012/3/3f/UCD_parts_small_banner.jpg"></a>
 +
</div>
 +
<div id="myleftrightbox"  class="spacebox">
 +
<p></p>
 +
</div>
 +
<div id="myleftrightbox"  class="fourboxes2-4">
 +
<a href="https://2012.igem.org/Team:UC_Davis/Criteria"><img src="https://static.igem.org/mediawiki/2012/1/18/UCD_criteria_small_banner.jpg"></a>
 +
</div>
 +
</div>
 +
<!-- 2nd row four boxes ends here -->
 +
 
 +
 
 +
 
 +
<!-- <div id="sponsorbox" style="width:220px; float:right;"> -->
 +
 
 +
<div id="sponsorbox">
 +
<div id="sponsorbox" class="sponsorfloat">
 +
<!-- twitter starts here -->
 +
</script>
 +
<div id="tweets">
 +
<center>
 +
<h2>UCDavis iGEM Tweets</h2>
 +
</center>
 +
<script charset="utf-8" src="http://widgets.twimg.com/j/2/widget.js"></script>
 +
<script>
 +
new TWTR.Widget({
 +
  version: 2,
 +
  type: 'profile',
 +
  rpp: 10,
 +
  interval: 30000,
 +
  width: 203,
 +
  height: 100,
 +
 
 +
  theme: {
 +
    shell: {
 +
      background: '#004b85',
 +
      color: '#ffffff'
 +
    },
 +
    tweets: {
 +
      background: '#004b85',
 +
      color: '#ffffff',
 +
      links: '#4aed05'
 +
    }
 +
 +
  },
 +
  features: {
 +
    scrollbar: true,
 +
    loop: false,
 +
    live: true,
 +
    behavior: 'all'
 +
  }
 +
}).render().setUser('UCDavisiGEM').start();
 +
 
 +
</script>
 +
</div>
 +
<!-- twitter ends here -->
 +
</div>
 +
 
 +
<div id="sponsorbox" class="sponsorfloat">
 +
<center>
 +
<h2>Our Sponsors</h2>
 +
<a href="http://www.novozymes.com/en/Pages/default.aspx" target="_blank"><img src="https://static.igem.org/mediawiki/2011/2/21/UCD_Novozymes-logo.jpg" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://engineering.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2011/f/f6/UCD_CoE.png" width="200" height="40"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://biosci.ucdavis.edu/index_js.html" target="_blank"><img src="https://static.igem.org/mediawiki/2011/b/b1/UCD_biosci_sponsor.jpg" width="200" height="90"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.genomecenter.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2011/1/1b/UCD_Genome_center_sponsor.jpg" width="200" height="60"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.cs.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2012/6/6b/UCD_Computer_sponsor.jpg" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.bme.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2011/4/40/UCD_BME_logo_minimal_copy.png" width="200 height="70"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.fishersci.com" target="_blank"><img src="https://static.igem.org/mediawiki/2011/a/a4/UCD_Fisher_Logo.gif" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.arcadiabio.com/" target="_blank"><img src="https://static.igem.org/mediawiki/2012/4/46/UCD_Arcadia_sponsor.jpg
 +
" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://provost.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2012/8/82/UCD_Provost_sponsor.jpg
 +
" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://www.research.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2012/9/99/UCD_Research_sponsor.jpg" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a href="http://ucomm.ucdavis.edu/" target="_blank"><img src="https://static.igem.org/mediawiki/2012/b/b4/UCD_Communications_sponsor.jpg" width="200"></a>
 +
</center>
 +
 
 +
<center>
 +
<a title="" target="_blank"><img src="https://static.igem.org/mediawiki/2012/2/25/UCD_Schultz_sponsor.jpg
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<h1> Welcome </h1>
<h1> Welcome </h1>
<p>Welcome to iGEM 2012 at UC Davis!</p>
<p>Welcome to iGEM 2012 at UC Davis!</p>
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This year's UC Davis team is composed of ten undergraduates, two advisors, and a graduate student. We come from different areas of study, but we're all working together on this year's synthetic biology project. Due to the global impact of plastic pollution, we have decided to focus on biodegradation of polyethylene terephthalate (PET). PET is a commonly and widely used plastic, but only a small percentage of them are recycled, meaning a majority of the trash ends up in landfills and the oceans. It is a global issue, and achieving our goal would have a big impact on the issue of plastic degradation.  
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This year's UC Davis team is composed of ten undergraduates, two advisors, and two graduate students. We come from different areas of study, but we're all working together on this year's synthetic biology project for the iGEM competition. Due to the global impact of plastic pollution, we have decided to focus on biodegradation of polyethylene terephthalate (PET). PET is a widely used material, commonly found in plastic bottles, textiles, and other consumer goods. However, only a small percentage of it ends up being recycled, meaning a majority of the PET ends up in landfills and the oceans. It is a global issue, and achieving our goal would have a big impact on the issue of plastic degradation.
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<h1>Our Project/Abstract  </h1>
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<ul style="font-size:10px;list-style-image:none;list-style-type:none;float:left;display:inline;color:#000000;"
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>
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<p>We hope to accomplish:</p><br>
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<li style="float:left;margin:0 10px;"><a
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This year, our team hopes to successfully insert the gene for cutinase, an
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href="https://2012.igem.org/Team:UC_Davis"><p>Home</p><ul
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enzyme that has been shown to degrade polyethylene terephthalate (PET), into
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style="text-indent:-15px;
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several strains of E. coli. PET is a major kind of plastic used today, and we hope to
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list-style-image:none;list-style-type:none;color:#000000;"><li><a
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overproduce cutinase within the E. coli and secrete the enzyme into the extracellular
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style="color:#000000 "
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region to degrade the PET. We hope to test the cutinase out on several kinds of
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href="https://2012.igem.org/Team:UC_Davis">Welcome</a> </li><li><a
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PET, such as films from scientific companies and plastic bottles, and test how much
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style="color:#000000 "
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each is broken down. We also hope to improve the cutinase itself through targeted
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href="https://2012.igem.org/Team:UC_Davis">Tweets</a></li><li><a
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mutations and codon optimization, through programs such as Foldit and SWISS-
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style="color:#000000 "
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MODEL.<br><br>
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href="https://2012.igem.org/Team:UC_Davis">Sponsors</a> </li><li><a
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Through our research, we have learned that with cutinase, PET degrades into
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style="color:#000000 "
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terephthalic acid (TPA) and ethylene glycol. While TPA does not appear to be
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href="https://2012.igem.org/Team:UC_Davis/Criteria">Criteria</a> </li>
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harmful, ethylene glycol is a toxic substance. We hope to degrade ethylene glycol as
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</ul> </a> </li>
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much as possible by enhancing the promoters that express the degradative enzymes
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involved. After ethylene glycol is degraded, we hope to redirect all further
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byproducts into glycolysis within E. coli so that the project would sustain itself.
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We also hope to perform a complete economic and environmental analysis
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of our project to see how feasible it would be in real life and to assess the impact it
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could have.<br><br>
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Lastly, we need to ensure that our parts do not have common restriction
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sites within them so they can be used properly in the standard BioBrick format. We
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hope to create and characterize a part family and to end up with a series of BioBrick
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standard parts to submit to the Parts Registry.
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<br><br>
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<p>What We Have Done So Far:</p><br>
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We have outlined a plan for the engineering of the PET degradation circuit
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and we ordered a synthesized sequence for cutinase. We asked for separate strains
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of E. coli from Yale and Barcelona.<br><br>
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We learned basic lab protocols, such as ligation, transformation, and
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digestion and we have worked on the Wiki.<br><br>
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We have done extensive research on past attempts to degrade PET and other
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plastics. We even visited our local landfill to talk about current issues with waste
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degradation, such as control over concentrations of methane.<br><br>
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Two of our members (Nick and Mattan) attended the Biomedical Engineering
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Entrepreneurship Academy to be better informed about the economic implications
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of our project, and what companies might be looking for in terms of a completed
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product.<br><br>
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Lastly, we’ve had team bonding, over sushi buffets, ice cream sandwiches and
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laughs.<br>
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<li style="float:left;margin:0 10px;"><a
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href="https://2012.igem.org/Team:UC_Davis/Team"><p>Team</p><ul
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style="text-indent:-15px;
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list-style-image:none;list-style-type:none;color:#000000;"><li><a
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style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Team">Who we are</a>
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</li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Team">Students</a></li><li><a
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style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Team">Advisors</a> </li>
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</ul> </a> </li>
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<li style="float:left ;margin:0 10px;"><a
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href="https://2012.igem.org/Team:UC_Davis/Project "><p>Project</p></a>
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<ul style="text-indent:-15px;list-style-image:none;list-style-type:none;color:#000000"><li><a
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style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project">Project Overview</a>
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</li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project/Catalyst ">Module
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Engineering</a></li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project/Protein_Engineering
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">Protein Engineering</a></li>
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<li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project/Strain ">Chassis
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Engineering</a></li>
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   <li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project/Directed_Evolution ">
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- Directed Evolution</a></li>
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  <li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Project/Our_Strain "> -
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Rational Engineering</a></li>
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<li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Criteria">Critera</a>
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</li></ul> </li>
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<li style="float:left ;margin:0 10px"><a
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href="https://2012.igem.org/Team:UC_Davis/Safety "> <p>Safety</p></a>
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<a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Safety "> Safety</a> </li>
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<li style="float:left ;margin:0 10px;"><a
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href="https://2012.igem.org/Team:UC_Davis/Notebook ">
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<p>Notebook</p></a> <ul
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style="text-indent:-15px;list-style-image:none;list-style-type:none;color:#000000
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"><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Notebook">Notebook</a>
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</li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Notebook/Protocols
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">Protocols</a> </li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Notebook/Gallery">Gallery</a>
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</li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Criteria">Critera</a> </li>
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</ul> </li>
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<li style="float:left ;margin:0 10px;"><a
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title="https://2012.igem.org/Team:UC_Davis/Data "> <p>Data </p></a> <ul
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style="text-indent:-15px;list-style-image:none;list-style-type:none;color:#000000
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"><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Data/Cutinase_Activity ">
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Cutinase Activity</a> </li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Data/Ethylene_Glycol ">
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Ethylene Glycol</a> </li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Data/Modeling ">
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Modeling</a> </li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Parts ">Parts</a></li> </ul>
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<li style="float:left ;margin:0 10px"><a
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href="https://2012.igem.org/Team:UC_Davis/Attributions ">
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<p>Attribution </p></a><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Attributions ">
 +
Attribution</a></li>
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<li style="float:left ;margin:0 10px"><a
 +
href="https://2012.igem.org/Main_Page "> <p>iGEM </p></a><ul
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style="text-indent:-15px;list-style-image:none;list-style-type:none;color:#000000
 +
"><li><a style="color:#000000 " href="https://2012.igem.org/Main_Page
 +
">Main iGEM</a> </li><li><a style="color:#000000 "
 +
href="https://2012.igem.org/Team:UC_Davis/Criteria "> Criteria</a>
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</li><li><a style="color:#000000 "
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href="https://2012.igem.org/Team:UC_Davis/Human_Practices ">Human
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Practices</a></li> </ul>
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</div>
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Latest revision as of 21:54, 2 August 2013

Team:UC Davis - 2012.igem.org

UCDavis iGEM Tweets

Our Sponsors

Welcome

Welcome to iGEM 2012 at UC Davis!

This year's UC Davis team is composed of ten undergraduates, two advisors, and two graduate students. We come from different areas of study, but we're all working together on this year's synthetic biology project for the iGEM competition. Due to the global impact of plastic pollution, we have decided to focus on biodegradation of polyethylene terephthalate (PET). PET is a widely used material, commonly found in plastic bottles, textiles, and other consumer goods. However, only a small percentage of it ends up being recycled, meaning a majority of the PET ends up in landfills and the oceans. It is a global issue, and achieving our goal would have a big impact on the issue of plastic degradation.

Retrieved from "http://2012.igem.org/Team:UC_Davis"