Team:Evry/main-img.js

From 2012.igem.org

(Difference between revisions)
 
(76 intermediate revisions not shown)
Line 17: Line 17:
       init:function(pSystem){
       init:function(pSystem){
         sys = pSystem
         sys = pSystem
-
         sys.screen({size:{width:dom.width(), height:dom.height()},
+
         sys.screen({size:{width:dom.width(), height:dom.height()},padding:[36,60,36,60]})
-
                    padding:[36,60,36,60]})
+
         $(window).resize(that.resize)
         $(window).resize(that.resize)
Line 24: Line 23:
         that._initMouseHandling()
         that._initMouseHandling()
-
         if (document.referrer.match(/Goldenbricks|Plasmids|AIDSystem/)){
+
         if (document.referrer.match(/GoldenBricksxxxxxxxx|Plasmids|AIDSystem/)){
           // if we got here by hitting the back button in one of the Benchwork,  
           // if we got here by hitting the back button in one of the Benchwork,  
           // start with the Benchwork section pre-selected
           // start with the Benchwork section pre-selected
Line 31: Line 30:
       },
       },
       resize:function(){
       resize:function(){
-
         //canvas.width = $(window).width()
+
         // canvas.width = .5* $(window).width()
-
         //canvas.height = .75* $(window).height()
+
         // canvas.height = .5* $(window).height()
         sys.screen({size:{width:canvas.width, height:canvas.height}})
         sys.screen({size:{width:canvas.width, height:canvas.height}})
         _vignette = null
         _vignette = null
Line 46: Line 45:
           var w = Math.max(20, 20+gfx.textWidth(node.name) )
           var w = Math.max(20, 20+gfx.textWidth(node.name) )
           if (node.data.alpha===0) return
           if (node.data.alpha===0) return
-
           if (node.data.shape=='dot'){
+
 
 +
           if (node.data.shape=='img'){
 +
    var img_elem = new Image();
 +
    img_elem.src = node.data.url;
 +
    ctx.drawImage(img_elem, pt.x-w/2, pt.y-w/2, w, w); // Redimensionnement de l'image prévue comme tu le souhaitais !
             gfx.oval(pt.x-w/2, pt.y-w/2, w, w, {fill:node.data.color, alpha:0})
             gfx.oval(pt.x-w/2, pt.y-w/2, w, w, {fill:node.data.color, alpha:0})
-
            gfx.text(node.name, pt.x, pt.y+7, {color:"white", align:"center", font:"Arial", size:12})
 
           }
           }
-
/* Begin */
+
           else if (node.data.shape=='dot'){
-
           else if (node.data.shape='img'){
+
            gfx.oval(pt.x-w/2, pt.y-w/2, w, w, {fill:node.data.color, alpha:node.data.alpha})
-
var img_elem = new Image();
+
            gfx.text(node.name, pt.x, pt.y+7, {color:"white", align:"center", font:"Arial", weight:"bold", size:12})    
-
img_elem.src = node.data.url;
+
-
ctx.drawImage(img_elem, pt.x-w/2, pt.y-w/2, w, w); // Redimensionnement de l'image prévue comme tu le souhaitais !
+
-
                gfx.text(node.name, pt.x, pt.y+7, {color:"white", align:"center", font:"Arial", size:12})
+
           }
           }
-
 
-
/*Thibault END*/
 
           else{
           else{
Line 76: Line 73:
         if (!_vignette){
         if (!_vignette){
-
          var top = ctx.createLinearGradient(0,0,0,r)
+
        var top = ctx.createLinearGradient(0,0,0,r)
           top.addColorStop(0, "#e0e0e0")
           top.addColorStop(0, "#e0e0e0")
           top.addColorStop(.7, "rgba(255,255,255,0)")
           top.addColorStop(.7, "rgba(255,255,255,0)")
Line 118: Line 115:
         sys.eachNode(function(node){
         sys.eachNode(function(node){
           if (node.data.shape=='dot') return // skip all but leafnodes
           if (node.data.shape=='dot') return // skip all but leafnodes
-
 
+
          if (node.data.shape=='img') return // skip all but leafnodes
           var nowVisible = ($.inArray(node, children)>=0)
           var nowVisible = ($.inArray(node, children)>=0)
           var newAlpha = (nowVisible) ? 1 : 0
           var newAlpha = (nowVisible) ? 1 : 0
Line 161: Line 158:
               }
               }
//            }else  
//            }else  
-
             if ($.inArray(nearest.node.name, ['French Froggies','Human Practice','Modeling','Benchwork']) >=0 ){
+
             if ($.inArray(nearest.node.name, ['The French Froggies Project!','Xenopus as a chassis','Hormonal Communicati','Modelingxxxxxxxxxxxx','GoldenBricksxxxxxxxx', 'Human Practicexxxxxx', 'The Teamxxxxxxxxxxxx']) >=0 ){
               if (nearest.node.name!=_section){
               if (nearest.node.name!=_section){
                 _section = nearest.node.name
                 _section = nearest.node.name
Line 314: Line 311:
             $(that).trigger({type:'mode', mode:'visible', dt:dt})
             $(that).trigger({type:'mode', mode:'visible', dt:dt})
           })
           })
-
           document.title = "FRENCH FROGGIES"
+
           document.title = "The French Froggies Project!"
           break
           break
            
            
Line 332: Line 329:
/*Thibault BEGIN*/
/*Thibault BEGIN*/
     var theUI = {
     var theUI = {
-
     
 
-
      nodes:{"FRENCH FROGGIES":{color:"#51C215", shape:"dot", alpha:1, link:'Project', url:'https://static.igem.org/mediawiki/2012/a/a1/ResultsbuttonLowRes.png'}, //Attribut url pour l'image ajouté /*Thibault*/
 
-
            "Benchwork":{color:"#FF963E", shape:"dot", alpha:1, url:'https://static.igem.org/mediawiki/2012/a/a1/ResultsbuttonLowRes.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 
-
            "Synthetic hormone":{color:CLR.level3benchwork, alpha:0, link:'AIDSystem'},
 
-
            "Goldenbrick":{color:CLR.level3benchwork, alpha:0, link:'GB'},
 
-
            "Xenopus : A multicellular chassis":{color:CLR.level3benchwork, alpha:0, link:'FrenchFrog'},
 
-
            "Modeling":{color:"#1A5291", shape:"dot", alpha:1, link:'Modeling', url:'https://static.igem.org/mediawiki/2012/a/a1/ResultsbuttonLowRes.png'}, //Attribut url pour l'image ajouté /*Thibault*/
+
      // ['The French Froggies Project!','Xenopus as a chassis','Hormonal Communicati','Modelingxxxxxxxxxxxx','GoldenBricksxxxxxxxx', 'Human Practicexxxxxx', 'The Teamxxxxxxxxxxxx']
-
            "Auxin transport and diffusion":{color:CLR.level3model, alpha:0, link:'auxin_pde'},
+
-
            "Experimental protocol":{color:CLR.level3model, alpha:0, link:'plasmid_splitting'},
+
-
            "Cellular model : auxin production":{color:CLR.level3model, alpha:0, link:'Auxin_production'},
+
-
            "Cellular model : auxin detection":{color:CLR.level3model, alpha:0, link:'Auxin_detection'},
+
-
             "Human Pratice":{color:"#A94AC7", shape:"dot", alpha:1, link:'HumanPractice', url:'https://static.igem.org/mediawiki/2012/a/a1/ResultsbuttonLowRes.png'}  //Attribut url pour l'image ajouté /*Thibault*/
+
      nodes:{"The French Froggies Project!":{color:"#51C215", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Project', url:'https://static.igem.org/mediawiki/2012/c/cf/French.png'}, //Attribut url pour l'image ajouté /*Thibault*/
 +
 
 +
            "Xenopus as a chassis":{color:"#63a358", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/FrenchFrog', url:'https://static.igem.org/mediawiki/2012/b/bd/Xenope.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 +
                "Xenopus plasmids":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/FrenchFrog#plasmid'},
 +
                "Injection in Xenopus":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/InjectionTuto'},
 +
                "Development stages":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/Stages'},
 +
                "Characterization":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/Tadpole_injection1'},
 +
                "Collaboration with Slovenia":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/TeamSlovenia_collaboration'},
 +
 
 +
            "Hormonal Communicati":{color:"#852c2b", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/AIDSystem', url:'https://static.igem.org/mediawiki/2012/e/e2/Hormone.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 +
                "Auxin emitter":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AIDSystem#auxin'},
 +
                "Auxin receiver":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AIDSystem#AID'},
 +
                "Auxin toxicity":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AuxinTOX'},
 +
                "Auxin uptake":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_uptake'},
 +
                "Degron system caracterization":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/TirISystemCaracterization'},
 +
 
 +
            "Modelingxxxxxxxxxxxx":{color:"#1A5291", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Modeling', url:'https://static.igem.org/mediawiki/2012/5/5b/ModelingDHIUHEIUHD.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 +
                "General Model":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/ODE_model'},
 +
                "ODEs derivations":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_pde'},
 +
                "Diffusion":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/Auxin_diffusion'},
 +
                "Auxin production":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_production'},
 +
                "Auxin reception":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_detection'},
 +
                "Plasmid diffusion":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/plasmid_splitting'},
 +
                "Model integration":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/model_integration'},
 +
                "Parameters measurements":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/Experimentals_Parameters'},
 +
 
 +
            "GoldenBricksxxxxxxxx":{color:"#1A5291", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/GB', url:'https://static.igem.org/mediawiki/2012/a/a4/GoldeN.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 +
 
 +
             "Human Practicexxxxxx":{color:"#a6953f", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/HumanPractice', url:'https://static.igem.org/mediawiki/2012/b/ba/HumanPractice.png'},  //Attribut url pour l'image ajouté /*Thibault*/
 +
                "Hi Xenope!":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/Introduction'},
 +
                "Be a chassis?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/modelorganism'},
 +
                "Free the frogs!":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/freedthefrogs'},
 +
                "A chassis, really?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/chassis'},
 +
                "Work with Xenopus again?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/future'},
 +
                "What the laws says...":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/others'},
 +
 
 +
            "The Teamxxxxxxxxxxxx":{color:"#632e8c", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Team', url:'https://static.igem.org/mediawiki/2012/9/93/TeamEVRY.png'}, //Attribut url pour l'image ajouté /*Thibault*/
 +
                "Our Team":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Team'},
 +
                "Our Sponsors":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Sponsors'},
 +
                "Attributions":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Attributions'},
 +
                "Official profile":{color:"#632e8c", alpha:0, link:'https://igem.org/Team.cgi?year=2012'},
 +
                "Collaborations":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Collaborations'}
             },
             },
 +
       edges:{
       edges:{
        
        
-
         "FRENCH FROGGIES":{
+
         "The French Froggies Project!":{
-
             Benchwork:{"length":0.5,"weight":1},
+
             "Xenopus as a chassis":{"length":0.8,"weight":2},
-
             Modeling:{"length":0.5,"weight":2},
+
             "Hormonal Communicati":{"length":0.8,"weight":2},
-
             "Human Pratice":{"length":0.5,"weight":3}
+
            "Modelingxxxxxxxxxxxx":{"length":0.8,"weight":2},
 +
            "GoldenBricksxxxxxxxx":{"length":1.5,"weight":2},
 +
             "Human Practicexxxxxx":{"length":0.75,"weight":2},
 +
            "The Teamxxxxxxxxxxxx":{"length":0.5,"weight":2}
         },
         },
-
         Benchwork:{
+
 
-
             "Synthetic hormone":{"length":0.5,"weight":1},
+
 
-
             "Goldenbrick":{"length":0.5,"weight":2},
+
         "Xenopus as a chassis":{
-
             "Xenopus : A multicellular chassis":{"length":0.5,"weight":3}
+
             "Xenopus plasmids":{"length":0.75,"weight":1},
 +
             "Injection in Xenopus":{"length":0.75,"weight":2},
 +
             "Development stages":{"length":0.75,"weight":2},
 +
            "Characterization":{"length":0.75,"weight":2},
 +
            "Collaboration with Slovenia":{"length":0.75,"weight":2}
         },
         },
-
         Modeling:{
+
         "Hormonal Communicati":{
-
             "Auxin transport and diffusion":{"length":0.5,"weight":2},
+
             "Auxin emitter":{"length":1,"weight":2},
-
             "Experimental protocol":{"length":0.5,"weight":2},
+
             "Auxin receiver":{"length":1,"weight":2},
-
             "Cellular model : auxin production":{"length":0.5,"weight":2},
+
             "Auxin toxicity":{"length":1,"weight":2},
-
             "Cellular model : auxin detection":{"length":0.5,"weight":2}
+
             "Auxin uptake":{"length":1,"weight":2},
 +
            "Degron system caracterization":{"length":1,"weight":2}
 +
           
         },
         },
-
         "Human Pratice":{}
+
 
 +
        "Modelingxxxxxxxxxxxx":{
 +
            "General Model":{"length":0.5,"weight":2},
 +
            "ODEs derivations":{"length":0.5,"weight":2},
 +
            "Diffusion":{"length":0.75,"weight":2},
 +
            "Auxin production":{"length":0.5,"weight":2},
 +
            "Auxin reception":{"length":0.5,"weight":2},
 +
            "Plasmid diffusion":{"length":0.5,"weight":2},
 +
            "Model integration":{"length":0.5,"weight":2},
 +
            "Parameters measurements":{"length":0.5,"weight":2}
 +
        },
 +
 
 +
        "GoldenBricksxxxxxxxx":{},
 +
 
 +
 
 +
         "Human Practicexxxxxx":{
 +
            "Hi Xenope!":{"length":0.5,"weight":2},
 +
            "Be a chassis?":{"length":0.5,"weight":2},
 +
            "Free the frogs!":{"length":0.5,"weight":2},
 +
            "A chassis, really?":{"length":0.5,"weight":2},
 +
            "Work with Xenopus again?":{"length":0.5,"weight":2},
 +
            "What the laws says...":{"length":0.5,"weight":2}
 +
        },
 +
 
 +
        "The Teamxxxxxxxxxxxx":{
 +
            "Our Team":{"length":0.5,"weight":2},
 +
            "Our Sponsors":{"length":0.5,"weight":2},
 +
            "Attributions":{"length":0.5,"weight":2},
 +
            "Official profile":{"length":0.5,"weight":2},
 +
            "Collaborations":{"length":0.5,"weight":2}
 +
        }
       }
       }
     }
     }

Latest revision as of 02:44, 27 October 2012

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   var _vignette = null
   var selected = null,
       nearest = null,
       _mouseP = null;


   var that = {
     init:function(pSystem){
       sys = pSystem
       sys.screen({size:{width:dom.width(), height:dom.height()},padding:[36,60,36,60]})
       $(window).resize(that.resize)
       that.resize()
       that._initMouseHandling()
       if (document.referrer.match(/GoldenBricksxxxxxxxx|Plasmids|AIDSystem/)){
         // if we got here by hitting the back button in one of the Benchwork, 
         // start with the Benchwork section pre-selected
         that.switchSection('Benchwork')
       }
     },
     resize:function(){
       // canvas.width = .5* $(window).width()
       // canvas.height = .5* $(window).height()
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         if (node.data.shape=='img'){

var img_elem = new Image(); img_elem.src = node.data.url; ctx.drawImage(img_elem, pt.x-w/2, pt.y-w/2, w, w); // Redimensionnement de l'image prévue comme tu le souhaitais !

           gfx.oval(pt.x-w/2, pt.y-w/2, w, w, {fill:node.data.color, alpha:0})
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         var nowVisible = ($.inArray(node, children)>=0)
         var newAlpha = (nowVisible) ? 1 : 0
         var dt = (nowVisible) ? .5 : .5
         sys.tweenNode(node, dt, {alpha:newAlpha})
         if (newAlpha==1){
           node.p.x = parent.p.x + .05*Math.random() - .025
           node.p.y = parent.p.y + .05*Math.random() - .025
           node.tempMass = .001
         }
       })
     },
     
     
     _initMouseHandling:function(){
       // no-nonsense drag and drop (thanks springy.js)
       selected = null;
       nearest = null;
       var dragged = null;
       var oldmass = 1
       var _section = null
       var handler = {
         moved:function(e){
           var pos = $(canvas).offset();
           _mouseP = arbor.Point(e.pageX-pos.left, e.pageY-pos.top)
           nearest = sys.nearest(_mouseP);
           if (!nearest.node) return false

// if (nearest.node.data.shape!='dot'){

             selected = (nearest.distance < 50) ? nearest : null
             if (selected){
                dom.addClass('linkable')
                window.status = selected.node.data.link//.replace(/^\//,"http://"+window.location.host+"/")//.replace(/^#/,)
             }
             else{
                dom.removeClass('linkable')
                window.status = 
             }

// }else

           if ($.inArray(nearest.node.name, ['The French Froggies Project!','Xenopus as a chassis','Hormonal Communicati','Modelingxxxxxxxxxxxx','GoldenBricksxxxxxxxx', 'Human Practicexxxxxx', 'The Teamxxxxxxxxxxxx']) >=0 ){
             if (nearest.node.name!=_section){
               _section = nearest.node.name
               that.switchSection(_section)
             }
             dom.removeClass('linkable')
             window.status = 
           }
           
           return false
         },
         clicked:function(e){
           var pos = $(canvas).offset();
           _mouseP = arbor.Point(e.pageX-pos.left, e.pageY-pos.top)
           nearest = dragged = sys.nearest(_mouseP);
           
           if (nearest && selected && nearest.node===selected.node){
             var link = selected.node.data.link
             if (link.match(/^#/)){
                $(that).trigger({type:"navigate", path:link.substr(1)})
             }else{
                window.location = link
             }
             return false
           }
           
           
           if (dragged && dragged.node !== null) dragged.node.fixed = true
           $(canvas).unbind('mousemove', handler.moved);
           $(canvas).bind('mousemove', handler.dragged)
           $(window).bind('mouseup', handler.dropped)
           return false
         },
         dragged:function(e){
           var old_nearest = nearest && nearest.node._id
           var pos = $(canvas).offset();
           var s = arbor.Point(e.pageX-pos.left, e.pageY-pos.top)
           if (!nearest) return
           if (dragged !== null && dragged.node !== null){
             var p = sys.fromScreen(s)
             dragged.node.p = p
           }
           return false
         },
         dropped:function(e){
           if (dragged===null || dragged.node===undefined) return
           if (dragged.node !== null) dragged.node.fixed = false
           dragged.node.tempMass = 1000
           dragged = null;
           // selected = null
           $(canvas).unbind('mousemove', handler.dragged)
           $(window).unbind('mouseup', handler.dropped)
           $(canvas).bind('mousemove', handler.moved);
           _mouseP = null
           return false
         }


       }
       $(canvas).mousedown(handler.clicked);
       $(canvas).mousemove(handler.moved);
     }
   }
   
   return that
 }
 
 
 var Nav = function(elt){
   var dom = $(elt)
   var _path = null
   
   var that = {
     init:function(){
       $(window).bind('popstate',that.navigate)
       dom.find('> a').click(that.back)
       $('.more').one('click',that.more)
       
       $('#Model dl:not(.datastructure) dt').click(that.reveal)
       that.update()
       return that
     },
     more:function(e){
       $(this).removeAttr('href').addClass('less').html(' ').siblings().fadeIn()
       $(this).next('h2').find('a').one('click', that.less)
       
       return false
     },
     less:function(e){
       var more = $(this).closest('h2').prev('a')
       $(this).closest('h2').prev('a')
       .nextAll().fadeOut(function(){
         $(more).text('creation & use').removeClass('less').attr('href','#')
       })
       $(this).closest('h2').prev('a').one('click',that.more)
       
       return false
     },
     reveal:function(e){
       $(this).next('dd').fadeToggle('fast')
       return false
     },
     back:function(){
       _path = "/"
       if (window.history && window.history.pushState){
         window.history.pushState({path:_path}, "", _path);
       }
       that.update()
       return false
     },
     navigate:function(e){
       var oldpath = _path
       if (e.type=='navigate'){
         _path = e.path
         if (window.history && window.history.pushState){
            window.history.pushState({path:_path}, "", _path);
         }else{
           that.update()
         }
       }else if (e.type=='popstate'){
         var state = e.originalEvent.state || {}
         _path = state.path || window.location.pathname.replace(/^\//,)
       }
       if (_path != oldpath) that.update()
     },
     update:function(){
       var dt = 'slow'
       if (_path===null){
         // this is the original page load. don't animate anything just jump
         // to the proper state
         _path = window.location.pathname.replace(/^\//,)
         dt = 0
         dom.find('p').css('opacity',0).show().fadeTo('slow',1)
       }
       switch (_path){
         case :
         case '/':

// dom.find('p').text('a graph visualization library using web workers and jQuery')

         dom.find('> a').removeClass('active').attr('href','#')
         $('#Model').fadeTo('fast',0, function(){
           $(this).hide()
           $(that).trigger({type:'mode', mode:'visible', dt:dt})
         })
         document.title = "The French Froggies Project!"
         break
         
       }
       
     }
   }
   return that
 }
 
 $(document).ready(function(){
   var CLR = {
     branch:"#b2b19d",
     level3benchwork:"#FFBF3E",
     level3model:"#4B86C7"
   }

/*Thibault BEGIN*/

   var theUI = {
      // ['The French Froggies Project!','Xenopus as a chassis','Hormonal Communicati','Modelingxxxxxxxxxxxx','GoldenBricksxxxxxxxx', 'Human Practicexxxxxx', 'The Teamxxxxxxxxxxxx']
     nodes:{"The French Froggies Project!":{color:"#51C215", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Project', url:'https://static.igem.org/mediawiki/2012/c/cf/French.png'}, //Attribut url pour l'image ajouté /*Thibault*/
            "Xenopus as a chassis":{color:"#63a358", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/FrenchFrog', url:'https://static.igem.org/mediawiki/2012/b/bd/Xenope.png'},  //Attribut url pour l'image ajouté /*Thibault*/
                "Xenopus plasmids":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/FrenchFrog#plasmid'},
                "Injection in Xenopus":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/InjectionTuto'},
                "Development stages":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/Stages'},
                "Characterization":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/Tadpole_injection1'},
                "Collaboration with Slovenia":{color:"#63a358", alpha:0, link:'https://2012.igem.org/Team:Evry/TeamSlovenia_collaboration'},
            "Hormonal Communicati":{color:"#852c2b", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/AIDSystem', url:'https://static.igem.org/mediawiki/2012/e/e2/Hormone.png'},  //Attribut url pour l'image ajouté /*Thibault*/
                "Auxin emitter":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AIDSystem#auxin'},
                "Auxin receiver":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AIDSystem#AID'},
                "Auxin toxicity":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/AuxinTOX'},
                "Auxin uptake":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_uptake'},
                "Degron system caracterization":{color:"#852c2b", alpha:0, link:'https://2012.igem.org/Team:Evry/TirISystemCaracterization'},
            "Modelingxxxxxxxxxxxx":{color:"#1A5291", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Modeling', url:'https://static.igem.org/mediawiki/2012/5/5b/ModelingDHIUHEIUHD.png'},  //Attribut url pour l'image ajouté /*Thibault*/
                "General Model":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/ODE_model'},
                "ODEs derivations":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_pde'},
                "Diffusion":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/Auxin_diffusion'},
                "Auxin production":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_production'},
                "Auxin reception":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/auxin_detection'},
                "Plasmid diffusion":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/plasmid_splitting'},
                "Model integration":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/model_integration'},
                "Parameters measurements":{color:CLR.level3model, alpha:0, link:'https://2012.igem.org/Team:Evry/Experimentals_Parameters'},
            "GoldenBricksxxxxxxxx":{color:"#1A5291", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/GB', url:'https://static.igem.org/mediawiki/2012/a/a4/GoldeN.png'},  //Attribut url pour l'image ajouté /*Thibault*/
            "Human Practicexxxxxx":{color:"#a6953f", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/HumanPractice', url:'https://static.igem.org/mediawiki/2012/b/ba/HumanPractice.png'},  //Attribut url pour l'image ajouté /*Thibault*/
                "Hi Xenope!":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/Introduction'},
                "Be a chassis?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/modelorganism'},
                "Free the frogs!":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/freedthefrogs'},
                "A chassis, really?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/chassis'},
                "Work with Xenopus again?":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/future'},
                "What the laws says...":{color:"#a6953f", alpha:0, link:'https://2012.igem.org/Team:Evry/HumanPractice/others'},
            "The Teamxxxxxxxxxxxx":{color:"#632e8c", shape:"img", alpha:1, link:'https://2012.igem.org/Team:Evry/Team', url:'https://static.igem.org/mediawiki/2012/9/93/TeamEVRY.png'},  //Attribut url pour l'image ajouté /*Thibault*/
                "Our Team":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Team'},
                "Our Sponsors":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Sponsors'},
                "Attributions":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Attributions'},
                "Official profile":{color:"#632e8c", alpha:0, link:'https://igem.org/Team.cgi?year=2012'},
                "Collaborations":{color:"#632e8c", alpha:0, link:'https://2012.igem.org/Team:Evry/Collaborations'}
           },
     edges:{


       "The French Froggies Project!":{
           "Xenopus as a chassis":{"length":0.8,"weight":2},
           "Hormonal Communicati":{"length":0.8,"weight":2},
           "Modelingxxxxxxxxxxxx":{"length":0.8,"weight":2},
           "GoldenBricksxxxxxxxx":{"length":1.5,"weight":2},
           "Human Practicexxxxxx":{"length":0.75,"weight":2},
           "The Teamxxxxxxxxxxxx":{"length":0.5,"weight":2}
       },


       "Xenopus as a chassis":{
           "Xenopus plasmids":{"length":0.75,"weight":1},
           "Injection in Xenopus":{"length":0.75,"weight":2},
           "Development stages":{"length":0.75,"weight":2},
           "Characterization":{"length":0.75,"weight":2},
           "Collaboration with Slovenia":{"length":0.75,"weight":2}
       },
       "Hormonal Communicati":{
           "Auxin emitter":{"length":1,"weight":2},
           "Auxin receiver":{"length":1,"weight":2},
           "Auxin toxicity":{"length":1,"weight":2},
           "Auxin uptake":{"length":1,"weight":2},
           "Degron system caracterization":{"length":1,"weight":2}
           
       },
       "Modelingxxxxxxxxxxxx":{
           "General Model":{"length":0.5,"weight":2},
           "ODEs derivations":{"length":0.5,"weight":2},
           "Diffusion":{"length":0.75,"weight":2},
           "Auxin production":{"length":0.5,"weight":2},
           "Auxin reception":{"length":0.5,"weight":2},
           "Plasmid diffusion":{"length":0.5,"weight":2},
           "Model integration":{"length":0.5,"weight":2},
           "Parameters measurements":{"length":0.5,"weight":2}
       },
       "GoldenBricksxxxxxxxx":{},


       "Human Practicexxxxxx":{
           "Hi Xenope!":{"length":0.5,"weight":2},
           "Be a chassis?":{"length":0.5,"weight":2},
           "Free the frogs!":{"length":0.5,"weight":2},
           "A chassis, really?":{"length":0.5,"weight":2},
           "Work with Xenopus again?":{"length":0.5,"weight":2},
           "What the laws says...":{"length":0.5,"weight":2}
       },
       "The Teamxxxxxxxxxxxx":{
           "Our Team":{"length":0.5,"weight":2},
           "Our Sponsors":{"length":0.5,"weight":2},
           "Attributions":{"length":0.5,"weight":2},
           "Official profile":{"length":0.5,"weight":2},
           "Collaborations":{"length":0.5,"weight":2}
       }
     }
   }

/*Thibault END*/

   var sys = arbor.ParticleSystem()
   sys.parameters({stiffness:900, repulsion:50, gravity:true, dt:0.015})
   sys.renderer = Renderer("#sitemap")
   sys.graft(theUI)
   
   var nav = Nav("#nav")
   $(sys.renderer).bind('navigate', nav.navigate)
   $(nav).bind('mode', sys.renderer.switchMode)
   nav.init()
 })

})(this.jQuery)