Team:Caltech/Notebook/material/Biofuel Protocols

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(Difference between revisions)
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<h4>Materials</h4>
<h4>Materials</h4>
<ul>
<ul>
-
<li> 100 uL ethanol
+
<li> water
-
<li> 5 mL water
+
<li> 1.0M bicine (pH 8.0)
 +
<li> 40 mM EDTA
 +
<li> 10 mM NAD
 +
<li> 4.2 mM thazolyl blue
 +
<li> 16.6 mM phenazine ethosulfate
 +
<li> 1 mg/mL alcohol dehydrogenase enzyme
 +
<li> ethanol
</ul>
</ul>
 +
<h4>Method</h4>
<h4>Method</h4>
-
<p>The ethanol assay uses the following reagants and consists of the reaction depicted below. MTT Formazan appears purple, and it is due to this color change that the assay works.</p>
+
<p> Make a master mix consisting of:</p>
<ul>
<ul>
-
<li>Make a serial dilution of ethanol. As shown below, we found a linear concentration to absorbance relation for concentrations under .05% ethanol.
+
<li> 3.6 mL water
-
 
+
<li> 1.2 mL bicine
 +
<li> 1.2 mL EDTA
 +
<li> 1.2 mL NAD
 +
<li> 1.2 ml thiazolyl blue
 +
<li> 2.4 mL phenazine ethosulfate
</ul>
</ul>
-
 
+
<p> Before running the experiment, add 1.2 mL of alcohol dehydrogenase enzyme. </p>
 +
<p> Pipette 5 uL of sample into the 96-well microtiter plate.  Add 95 uL of master mix. 
 +
Measure absorbance at 570 nm.  We found that the maximum absorbance of each well occurred
 +
at a different time relative to the concentration, so it is best to run a series of measurements
 +
over a period of approximately 4 hours. </p>
<br>
<br>

Revision as of 18:32, 3 July 2012



Biofuel Protocols

Ethanol Assay

Ethanol Color Assay Reaction
Photo of Reaction

Materials

  • water
  • 1.0M bicine (pH 8.0)
  • 40 mM EDTA
  • 10 mM NAD
  • 4.2 mM thazolyl blue
  • 16.6 mM phenazine ethosulfate
  • 1 mg/mL alcohol dehydrogenase enzyme
  • ethanol

Method

Make a master mix consisting of:

  • 3.6 mL water
  • 1.2 mL bicine
  • 1.2 mL EDTA
  • 1.2 mL NAD
  • 1.2 ml thiazolyl blue
  • 2.4 mL phenazine ethosulfate

Before running the experiment, add 1.2 mL of alcohol dehydrogenase enzyme.

Pipette 5 uL of sample into the 96-well microtiter plate. Add 95 uL of master mix. Measure absorbance at 570 nm. We found that the maximum absorbance of each well occurred at a different time relative to the concentration, so it is best to run a series of measurements over a period of approximately 4 hours.


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